Biosensor analysis of the interaction of potential dimerization inhibitors with HIV-1 protease

П. В. Ершов1, O. V. Gnedenko1, A. A. Molnar1, Andrey Lisitsa1, A. S. Ivanov1, Alexander I. Archakov1
1Orekhovich Institute of Biomedical Chemistry, Russian Academy of Medical Sciences, Moscow, Russia

Tóm tắt

Từ khóa


Tài liệu tham khảo

Veselovsky, A.V., Ivanov, Y.D., Ivanov, A.S., Archakov, A.I., Lewi, P., and Janssen, P., J. Mol. Recognit., 2002, vol. 15, pp. 405–422.

Berman, H.M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T.N., Weissig, H., Shindyalov, I.N., and Bourne, P.E., Nucleic Acids Research, 2000, vol. 28, pp. 235–242.

Jones, S. and Thornton, J.M., Proc. Natl. Acad. Sci. USA, 1996, vol. 93, pp. 13–20.

Dunn, B.M., Goodenow, M.M., Gustchina, A., and Wlodawer, A., Genome Biology, 2002, vol. 3(4), reviews3006.1–3006.7.

Oroszlan, S. and Luftig, R.B., Curr. Top. Microbiol. Immunol., 1990, vol. 157, pp. 153–185.

De Clercq, E. Med. Chem. Res., 2004, vol. 13, pp. 439–478.

Ala, P.J., Huston, E.E., Klabe, R.M., McCabe, D.D., Duke, J.L., Rizzo, C.J., Korant, B.D., DeLoskey, R.J., Lam, P.Y., Hodge, C.N., and Chang, C.H., Biochemistry, 1997, vol. 36, pp. 1573–1580.

Rodríguez-Barrios, F. and Gago, F., Current Topics in Medicinal Chemistry, 2004, vol. 4, pp. 671–686.

Koh, Y., Matsumi, S., Das, D., Amano, M., Davis, D.A., Li, J., Leschenko, S., Baldridge, A., Shioda, T., Yarchoan, R., Ghosh, A.K., and Mitsuya, H., J. Biol. Chem., 2007, vol. 282, pp. 28709–28720.

Boggetto, N. and Reboud-Ravaux, M., Biol. Chem., 2002, vol. 383, pp. 1321–1324.

Veselovsky, A.V. and Ivanov, A.S., Current Drug Targets — Infectious Disorders, 2003, vol. 3, pp. 33–40.

Ivanov, A.S., Veselovsky, A.V., Dubanov, A.V., and Skvortsov, V.S., Meth. Mol. Biol., 2005, vol. 316, pp. 389–432.

Ivanov, A.S., Gnedenko, O.V., Molnar, A.A., Mezentsev, Y.V., Lisitsa, A.V., and Archakov, A.I., J. Bioinform. Comput. Biol., 2007, vol. 5(2b), pp. 579–592.

McDonnell, J.M., Cur. Op. Chem. Biol., 2001, vol. 5, pp. 572–577.

Rich, R.L. and Myszka, D.G., Curr. Opin. Biotechnol., 2000, vol. 11, pp. 54–61.

Patočka, J., J. Applied Biomedicine, 2003, vol. 1, pp. 7–12.

Ito, M., Nakashima, H., Baba, M., Pauwels, R., De Clercq, E., Shigeta, S., and Yamamoto, N., Antiviral Research, 1987, vol. 7, no. 3, pp. 127–137.

Nakashima, H., Matsui, T., Yoshida, O., Isowa, Y., Kido, Y., Motoki, Y., Ito, M., Shigeta, S., Mori, T., and Yamamoto, N., Jap. J. Cancer Res., 1987, vol. 78, pp. 767–771.

Ito, M., Sato, A., Hirabayashi, K., Tanabe, F., Shigeta, S., Baba, M., De Clercq, E., Nakashima, H., and Yamamoto, N., Antiviral Res., 1988, vol. 10, no. 6, pp. 289–298.

Asl, M.N., and Hosseinzadeh, H., Phytotherapy Research, 2008, vol. 22, pp. 709–724.

Quéré, L., Wenger, T., and Schramm, H.J., Biochem. Biophys. Res. Commun., 1996, vol. 227, pp. 484–488.

Park, S.H. and Raines, R.T., Nat. Biotechnol., 2000, vol. 18, pp. 847–851.

Schramm, H.J., Boetzel, J., Büttner, J., Fritsche, E., Göhring, W., Jaeger, E., König, S., Thumfart, O., Wenger, T., Nagel, N.E., and Schramm, W., Antiviral. Res., 1996, vol. 30, pp. 155–170.

Biacore Sensor Surface Handbook (Biacore, 2003) chapter 4.4.

BIAevaluation Software Handbook v.4 (Biacore, 2004) chapter 4.

Markgren, P.O., Hamalainen, M., and Danielson, U.H., Anal. Biochem., 1998, vol. 265, pp. 340–350.

Markgren, P.O., Hamalainen, M., and Danielson, U.H., Anal. Biochem., 2000, vol. 279, pp. 71–78.

Markgren, P.O., Lindgren, M.T., Gertow, K., Karlsson, R., Hamalainen, M., and Danielson, U.H., Anal. Biochem., 2001, vol. 291, pp. 207–218.