An astute synthesis of locked nucleic acid monomers

Sustainable Chemical Processes - Tập 3 - Trang 1-6 - 2015
Vivek K Sharma1, Pallavi Rungta1, Vipin K Maikhuri1, Ashok K Prasad1
1Bioorganic Laboratory, Department of Chemistry, University of Delhi, Delhi, India

Tóm tắt

Novel attributes of Locked Nucleic Acid (LNA) makes it preferable over most of the other classes of modified nucleic acid analogues and therefore, it has been extensively explored in different synthetic oligonucleotide based therapeutics. In addition to five oligonucleotides of this class undergoing clinical trials, a healthy pipeline in pre-clinical studies validates the tenacity of LNA. Due to the increasing demand, an efficient biocatalytic methodology has recently been devised for the convergent synthesis of LNA monomers via selective enzymatic monoacetylation of diastereotopic hydroxymethyl functions of 3-O-benzyl-4-C-hydroxymethyl-1,2-O-isopropylidene-α-D-ribofuranose. This commentary article provides an insight into the different synthetic strategies followed for the synthesis of LNA monomers and their triumphs in clinical biotechnology.

Tài liệu tham khảo

Jordheim LP, Durantel D, Zoulim F, Dumontet C. Advances in the development of nucleoside and nucleotide analogues for cancer and viral diseases. Nat Rev Drug Discov. 2013;12:447–64. Sofia MJ, Chang W, Furman PA, Mosley RT, Ross BS. Nucleoside, nucleotide, and non-nucleoside inhibitors of hepatitis C virus NS5B RNA-dependent RNA-polymerase. J Med Chem. 2012;55:2481–531. De Clercq E. A 40-year journey in search of selective antiviral chemotherapy. Annu Rev Pharmacol Toxicol. 2011;51:1–24. Watts JK. Locked nucleic acid: tighter is different. Chem Commun. 2013;49:5618–20. Wengel J. Synthesis of 3′-C- and 4′-C-branched oligodeoxynucleotides and the development of Locked Nucleic Acid (LNA). Acc Chem Res. 1999;32:301–10. Olsen AG, Nielsen C, Wengel J. Synthesis and evaluation of anti-HIV activity of 3-azido-4-(hydroxymethyl)tetrahydrofuran derivatives containing 2-(thymin-1-yl)methyl, 2-(cytosin-1-yl)methyl or 2-(adenin-9-yl)methyl substituents- a new series of AZT analogues. J Chem Soc Perkin Trans. 2001;1:900–04. Sharma VK, Rungta P, Prasad AK. Nucleic acid therapeutics: basic concepts and recent developments. RSC Adv. 2014;4:16618–31. Lundin KE, Højland T, Hansen BR, Persson R, Bramsen JB, Kjems J, et al. Biological activity and biotechnological aspects of locked nucleic acids. Adv Genet. 2013;82:47–107. Singh SK, Nielsen P, Koshkin AA, Wengel J: LNA (locked nucleic acids): synthesis and high-affinity nucleic acid recognition. Chem Commun 1998, 455-56 Koshkin AA, Singh SK, Nielsen P, Rajwanshi VK, Kumar R, Meldgaard M, et al. LNA (Locked Nucleic Acids): Synthesis of the adenine, cytosine, guanine, 5-methylcytosine, thymine and uracil bicyclonucleoside monomers, oligomerisation, and unprecedented nucleic acid recognition. Tetrahedron. 1998;54:3607–30. Obika S, Nanbu D, Hari Y, Morio K, In Y, Ishida T, et al. Synthesis of 2′-O,4′-C-methyleneuridine and -cytidine. Novel bicyclic nucleosides having a fixed C3′-endo sugar puckering. Tetrahedron Lett. 1997;38:8735–38. Mitsuoka Y, Kodama T, Ohnishi R, Hari Y, Imanishi T, Obika S. A bridged nucleic acid, 2’,4’-BNA COC: synthesis of fully modified oligonucleotides bearing thymine, 5-methylcytosine, adenine and guanine 2’,4’-BNA COC monomers and RNA-selective nucleic-acid recognition. Nucleic Acids Res. 2009;37:1225–38. Sanger W. Principles of Nucleic Acid Structures. New York: Springer-Verlag; 1984. Kaur H, Babu BR, Maiti S. Perspectives on chemistry and therapeutic applications of Locked Nucleic Acid (LNA). Chem Rev. 2007;107:4672–97. Veedu RN, Wengel J. Locked nucleic acids: promising nucleic acid analogs for therapeutic applications. Chem Biodivers. 2010;7:536–42. Braasch DA, Liu Y, Corey DR. Antisense inhibition of gene expression in cells by oligonucleotides incorporating locked nucleic acids: effect of mRNA target sequence and chimera design. Nucleic Acids Res. 2002;30:5160–67. Lindow M, Kauppinen S. Discovering the first microRNA-targeted drug. J Cell Biol. 2012;199:407–12. For details of clinical trials: https://clinicaltrials.gov/. Koshkin AA, Rajwanshi VK, Wengel J. Novel convenient syntheses of LNA [2.2.1]bicyclo nucleosides. Tetrahedron Lett. 1998;39:4381–4. Koshkin AA, Fensholdt J, Pfundheller HM, Lomholt C. A simplified and efficient route to 2’-O,4’-C-methylene-linked bicyclic ribonucleosides (locked nucleic acid). J Org Chem. 2001;66:8504–12. Kumar TS, Kumar P, Sharma PK, Hrdlicka PJ. Optimized synthesis of LNA uracil nucleosides. Tetrahedron Lett. 2008;49:7168–70. Christensen SM, Hansen HF, Koch T. Molar-scale synthesis of 1,2:5,6-di-O-isopropylidene-α-D-allofuranose: DMSO oxidation of 1,2:5,6-di-O-isopropylidene-α-D-glucofuranose and subsequent sodium borohydride reduction. Org Process Res Dev. 2004;8:777–80. Youssefyeh RD, Verheyden JPH, Moffatt JG. 4’-Substituted nucleosides. 4. Synthesis of some 4’-hydroxymethyl nucleosides. J Org Chem. 1979;44:1301–09. Sharma VK, Kumar M, Olsen CE, Prasad AK. Chemoenzymatic convergent synthesis of 2-O,4-C-methyleneribonucleosides. J Org Chem. 2014;79:6336–41.