Alterations in gene expression in T1α null lung: a model of deficient alveolar sac development

BMC Developmental Biology - Tập 6 Số 1 - 2006
Guetchyn Millien1, Avrum Spira1, Anne Hinds1, Junling Wang1, Mary C. Williams1, María I. Ramirez2
1Pulmonary Center, Department of Medicine, Boston University School of Medicine, Boston, MA, USA
2Department of Pathology and Laboratory Medicine, Boston University School of Medicine, Boston, MA, USA

Tóm tắt

Abstract Background Development of lung alveolar sacs of normal structure and size at late gestation is necessary for the gas exchange process that sustains respiration at birth. Mice lacking the lung differentiation gene T1α [T1α(-/-)] fail to form expanded alveolar sacs, resulting in respiratory failure at birth. Since little is known about the molecular pathways driving alveolar sacculation, we used expression microarrays to identify genes altered in the abnormal lungs and, by inference, may play roles in normal lung morphogenesis. Results Altered expression of genes related to cell-cell interaction, such as ephrinA3, are observed in T1α(-/-) at E18.5. At term, FosB, Egr1, MPK-1 and Nur77, which can function as negative regulators of the cell-cycle, are down-regulated. This is consistent with the hyperproliferation of peripheral lung cells in term T1α (-/-) lungs reported earlier. Biochemical assays show that neither PCNA nor p21 are altered at E18.5. At term in contrast, PCNA is increased, and p21 is decreased. Conclusion This global analysis has identified a number of candidate genes that are significantly altered in lungs in which sacculation is abnormal. Many genes identified were not previously associated with lung development and may participate in formation of alveolar sacs prenatally.

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Tài liệu tham khảo

Kauffman SL: Kinetics of pulmonary epithelial proliferation during prenatal growth of the mouse lung. Anat Rec. 1975, 183: 393-403. 10.1002/ar.1091830304.

O'Hare KH, Townes PL: Morphogenesis of albino rat lung: an autoradiographic analysis of the embryological origin of the type I and II pulmonary epithelial cells. J Morphol. 1970, 132: 69-87. 10.1002/jmor.1051320105.

Williams MC: Alveolar type I cells: molecular phenotype and development. Annu Rev Physiol. 2003, 65: 669-95. 10.1146/annurev.physiol.65.092101.142446.

Cole TJ, Solomon NM, Van Driel R, Monk JA, Bird D, Richardson SJ, Dilley RJ, Hooper SB: Altered Epithelial Cell Proportions in the Fetal Lung of Glucocorticoid Receptor Null Mice. Am J Respir Cell Mol Biol. 2003

Muglia LJ, Bae DS, Brown TT, Vogt SK, Alvarez JG, Sunday ME, Majzoub JA: Proliferation and differentiation defects during lung development in corticotropin-releasing hormone-deficient mice. Am J Respir Cell Mol Biol. 1999, 20: 181-8.

Bouwman P, Gollner H, Elsasser HP, Eckhoff G, Karis A, Grosveld F, Philipsen S, Suske G: Transcription factor Sp3 is essential for post-natal survival and late tooth development. Embo J. 2000, 19: 655-61. 10.1093/emboj/19.4.655.

Zhang P, Wong C, Liu D, Finegold M, Harper JW, Elledge SJ: p21(CIP1) and p57(KIP2) control muscle differentiation at the myogenin step. Genes Dev. 1999, 13: 213-24. 10.1101/gad.13.18.2388.

Willnow TE, Hilpert J, Armstrong SA, Rohlmann A, Hammer RE, Burns DK, Herz J: Defective forebrain development in mice lacking gp330/megalin. Proc Natl Acad Sci USA. 1996, 93: 8460-4. 10.1073/pnas.93.16.8460.

Bellusci S, Henderson R, Winnier G, Oikawa T, Hogan BL: Evidence from normal expression and targeted misexpression that bone morphogenetic protein (Bmp-4) plays a role in mouse embryonic lung morphogenesis. Development. 1996, 122: 1693-702.

Koutsourakis M, Keijzer R, Visser P, Post M, Tibboel D, Grosveld F: Branching and differentiation defects in pulmonary epithelium with elevated Gata6 expression. Mech Dev. 2001, 105: 105-14. 10.1016/S0925-4773(01)00386-0.

Ramirez MI, Millien G, Hinds A, Cao Y, Seldin DC, Williams MC: T1alpha, a lung type I cell differentiation gene, is required for normal lung cell proliferation and alveolus formation at birth. Dev Biol. 2003, 256: 61-72. 10.1016/S0012-1606(02)00098-2.

Ramirez MI, Cao YX, Williams MC: 1.3 kilobases of the lung type I cell T1alpha gene promoter mimics endogenous gene expression patterns during development but lacks sequences to enhance expression in perinatal and adult lung. Dev Dyn. 1999, 215: 319-31. 10.1002/(SICI)1097-0177(199908)215:4<319::AID-AJA4>3.0.CO;2-B.

Wetterwald A, Hoffstetter W, Cecchini MG, Lanske B, Wagner C, Fleisch H, Atkinson M: Characterization and cloning of the E11 antigen, a marker expressed by rat osteoblasts and osteocytes. Bone. 1996, 18: 125-32. 10.1016/8756-3282(95)00457-2.

Williams MC, Cao Y, Hinds A, Rishi AK, Wetterwald A: T1 alpha protein is developmentally regulated and expressed by alveolar type I cells, choroid plexus, and ciliary epithelia of adult rats. Am J Respir Cell Mol Biol. 1996, 14: 577-85.

Bonner AE, Lemon WJ, You M: Gene expression signatures identify novel regulatory pathways during murine lung development: implications for lung tumorigenesis. J Med Genet. 2003, 40: 408-17. 10.1136/jmg.40.6.408.

Kaplan F, MacRae T, Comber J, Gagnon S, Sladek R, Hudson TJ, Sweezey NB: Application of expression microarrays to the investigation of fetal lung development in a glucocorticoid receptor knockout mouse model. Chest. 2002, 121: 90S-10.1378/chest.121.3_suppl.90S.

Clerch LB, Baras AS, Massaro GD, Hoffman EP, Massaro D: DNA microarray analysis of neonatal mouse lung connects regulation of KDR with dexamethasone-induced inhibition of alveolar formation. Am J Physiol Lung Cell Mol Physiol. 2004, 286: L411-9. 10.1152/ajplung.00306.2003.

Troyanskaya OG, Garber ME, Brown PO, Botstein D, Altman RB: Nonparametric methods for identifying differentially expressed genes in microarray data. Bioinformatics. 2002, 18: 1454-61. 10.1093/bioinformatics/18.11.1454.

UniGene. [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=unigene]

Dujardin DL, Barnhart LE, Stehman SA, Gomes ER, Gundersen GG, Vallee RB: A role for cytoplasmic dynein and LIS1 in directed cell movement. J Cell Biol. 2003, 163: 1205-11. 10.1083/jcb.200310097.

Grunder A, Ebel TT, Mallo M, Schwarzkopf G, Shimizu T, Sippel AE, Schrewe H: Nuclear factor I-B (Nfib) deficient mice have severe lung hypoplasia. Mech Dev. 2002, 112: 69-77. 10.1016/S0925-4773(01)00640-2.

Assemat E, Vinot S, Gofflot F, Linsel-Nitschke P, Illien F, Chatelet F, Verroust P, Louvet-Vallee S, Rinninger F, Kozyraki R: Expression and role of cubilin in the internalization of nutrients during the peri-implantation development of the rodent embryo. Biol Reprod. 2005, 72: 1079-86. 10.1095/biolreprod.104.036913.

Keegan CE, Herman JP, Karolyi IJ, O'Shea KS, Camper SA, Seasholtz AF: Differential expression of corticotropin-releasing hormone in developing mouse embryos and adult brain. Endocrinology. 1994, 134: 2547-55. 10.1210/en.134.6.2547.

Thompson A, Han VK, Yang K: Differential expression of 11beta-hydroxysteroid dehydrogenase types 1 and 2 mRNA and glucocorticoid receptor protein during mouse embryonic development. J Steroid Biochem Mol Biol. 2004, 88: 367-75. 10.1016/j.jsbmb.2003.12.014.

Zhao C, Meng A: Sp1-like transcription factors are regulators of embryonic development in vertebrates. Dev Growth Differ. 2005, 47: 201-11. 10.1111/j.1440-169X.2005.00797.x.

Kalo MS, Pasquale EB: Signal transfer by Eph receptors. Cell Tissue Res. 1999, 298: 1-9. 10.1007/PL00008807.

Hinck L: The versatile roles of "axon guidance" cues in tissue morphogenesis. Dev Cell. 2004, 7: 783-93. 10.1016/j.devcel.2004.11.002.

Hafner C, Schmitz G, Meyer S, Bataille F, Hau P, Langmann T, Dietmaier W, Landthaler M, Vogt T: Differential gene expression of Eph receptors and ephrins in benign human tissues and cancers. Clin Chem. 2004, 50: 490-9. 10.1373/clinchem.2003.026849.

Boyd AW, Lackmann M: Signals from Eph and ephrin proteins: a developmental tool kit. Sci STKE. 2001, 2001: RE20-

Nakamoto M: Eph receptors and ephrins. Int J Biochem Cell Biol. 2000, 32: 7-12. 10.1016/S1357-2725(99)00096-5.

Bauer AK, Dwyer-Nield LD, Malkinson AM: High cyclooxygenase 1 (COX-1) and cyclooxygenase 2 (COX-2) contents in mouse lung tumors. Carcinogenesis. 2000, 21: 543-50. 10.1093/carcin/21.4.543.

Pan T, Mason RJ, Westcott JY, Shannon JM: Rat alveolar type II cells inhibit lung fibroblast proliferation in vitro. Am J Respir Cell Mol Biol. 2001, 25: 353-61.

Panos RJ, Voelkel NF, Cott GR, Mason RJ, Westcott JY: Alterations in eicosanoid production by rat alveolar type II cells isolated after silica-induced lung injury. Am J Respir Cell Mol Biol. 1992, 6: 430-8.

Milde-Langosch K, Bamberger AM, Methner C, Rieck G, Loning T: Expression of cell cycle-regulatory proteins rb, p16/MTS1, p27/KIP1, p21/WAF1, cyclin D1 and cyclin E in breast cancer: correlations with expression of activating protein-1 family members. Int J Cancer. 2000, 87: 468-72. 10.1002/1097-0215(20000815)87:4<468::AID-IJC2>3.0.CO;2-R.

Ragione FD, Cucciolla V, Criniti V, Indaco S, Borriello A, Zappia V: p21Cip1 gene expression is modulated by Egr1: a novel regulatory mechanism involved in the resveratrol antiproliferative effect. J Biol Chem. 2003, 278: 23360-8. 10.1074/jbc.M300771200.

Krones-Herzig A, Adamson E, Mercola D: Early growth response 1 protein, an upstream gatekeeper of the p53 tumor suppressor, controls replicative senescence. Proc Natl Acad Sci USA. 2003, 100: 3233-8. 10.1073/pnas.2628034100.

Kang HJ, Song MR, Lee SK, Shin EC, Choi YH, Kim SJ, Lee JW, Lee MO: Retinoic acid and its receptors repress the expression and transactivation functions of Nur77: a possible mechanism for the inhibition of apoptosis by retinoic acid. Exp Cell Res. 2000, 256: 545-54. 10.1006/excr.2000.4832.

Li M, Zhou JY, Ge Y, Matherly LH, Wu GS: The phosphatase MKP1 is a transcriptional target of p53 involved in cell cycle regulation. J Biol Chem. 2003, 278: 41059-68. 10.1074/jbc.M307149200.

Kassel O, Sancono A, Kratzschmar J, Kreft B, Stassen M, Cato AC: Glucocorticoids inhibit MAP kinase via increased expression and decreased degradation of MKP-1. Embo J. 2001, 20: 7108-16. 10.1093/emboj/20.24.7108.

O'Reilly MA, Watkins RH, Staversky RJ, Maniscalco WM: Induced p21Cip1 in premature baboons with CLD: implications for alveolar hypoplasia. Am J Physiol Lung Cell Mol Physiol. 2003, 285: L964-71.

Jeong JW, Lee KY, Kwak I, White LD, Hilsenbeck SG, Lydon JP, DeMayo FJ: Identification of murine uterine genes regulated in a ligand-dependent manner by the progesterone receptor. Endocrinology. 2005, 146: 3490-505. 10.1210/en.2005-0016.

Lu J, Qian J, Izvolsky KI, Cardoso WV: Global analysis of genes differentially expressed in branching and non-branching regions of the mouse embryonic lung. Dev Biol. 2004, 273: 418-35. 10.1016/j.ydbio.2004.05.035.

McReynolds MR, Taylor-Garcia KM, Greer KA, Hoying JB, Brooks HL: Renal medullary gene expression in aquaporin-1 null mice. Am J Physiol Renal Physiol. 2005, 288: F315-21. 10.1152/ajprenal.00207.2004.

Kotton DN, Ma BY, Cardoso WV, Sanderson EA, Summer RS, Williams MC, Fine A: Bone marrow-derived cells as progenitors of lung alveolar epithelium. Development. 2001, 128: 5181-5188.

Website title. [http://www.uiowa.edu/~dshbwww/]

Website title. [http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GPL81]

Website title. [https://www.affymetrix.com/analysis/netaffx/go_analysis_netaffx4.affx]

Website title. [http://www.ncbi.nlm.nih.gov/geo/]

Website title. [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gds&term=GSE1363[Accession]&cmd=search]

Website title. [http://niaid.abcc.ncifcrf.gov/]