The detection of viable vegetative cells of Bacillus sporothermodurans using propidium monoazide with semi-nested PCR

Food Microbiology - Tập 34 - Trang 196-201 - 2013
F. Cattani1, C.A.S. Ferreira1, S.D. Oliveira1
1Laboratório de Imunologia e Microbiologia, Faculdade de Biociências, Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS), Av. Ipiranga 6681, 90619-900 Porto Alegre, Brazil

Tài liệu tham khảo

Anonymous, 491992, Council directive 92/46/EEC of 16 June 1992 laying down the health rules for the production and placing on the market of raw milk, heat-treated milk and milk-based products, Official Journal of the European Communities, L268, 1 Arenas, 2004, Microbiological and physico-chemical changes in Genestoso cheese, a Spanish acid curd variety, throughout ripening, Food Control, 15, 271, 10.1016/S0956-7135(03)00067-7 Bae, 2009, Discrimination of viable and dead fecal Bacteroidales bacteria by quantitative PCR with propidium monoazide, Applied and Environmental Microbiology, 75, 2940, 10.1128/AEM.01333-08 Brescia, 2009, Cryptosporidium propidium monoazide-PCR, a molecular biology-based technique for genotyping of viable Cryptosporidium oocysts, Applied and Environmental Microbiology, 75, 6856, 10.1128/AEM.00540-09 Bickley, 1996, Polymerase chain reaction (PCR) detection of Listeria monocytogenes in diluted milk and reversal of PCR inhibition caused by calcium ions, Letters in Applied Microbiology, 22, 153, 10.1111/j.1472-765X.1996.tb01131.x Brasil, 1997 Brasil, 2003 Cawthorn, 2008, Selective PCR detection of viable Enterobacter sakazakii cells utilizing propidium monoazide or ethidium bromide monoazide, Journal of Applied Microbiology, 105, 1178, 10.1111/j.1365-2672.2008.03851.x Chen, 2011, Rapid detection of viable Salmonellae in produce by coupling propidium monoazide with Loup-Mediated isothermal amplification, Applied and Environmental Microbiology, 77, 4008, 10.1128/AEM.00354-11 Chye, 2004, Bacteriological quality and safety of raw milk in Malaysia, Food Microbiology, 21, 535, 10.1016/j.fm.2003.11.007 Claeys, 2001, Formation kinetics of hydroxymethylfurfural, lactulose and furosine in milk heated under isothermal and non-isothermal conditions, Journal of Dairy Research, 68, 287, 10.1017/S0022029901004745 Contreras, 2011, Effect of PCR amplicon lenght on suppressing signals from membrane-compromised cells by propidium monoazide treatment, Journal of Microbiological Methods, 87, 89, 10.1016/j.mimet.2011.07.016 Elizaquível, 2012, Application of propidium monoazide-qPCR to evaluate the ultrasonic inactivation of Escherichia coli O157:H7 in fresh-cut vegetable wash water, Food Microbiology, 30, 316, 10.1016/j.fm.2011.10.008 Hammer, 1995, Characterization of a heat resistant mesophilic Bacillus species affecting quality of UHT-milk – a preliminary report, Kiel Milchwirt Forschungsber, 47, 297 Herman, 1998, Typing of Bacillus sporothermodurans and other Bacillus species isolated from milk by repetitive element sequence based PCR, Letters in Applied Microbiology, 26, 183, 10.1046/j.1472-765X.1998.00314.x Josefsen, 2010, Rapid quantification of viable Campylobacter bacteria on chicken carcasses, using real-time PCR and propidium monoazide treatment, as a tool for quantification risk assessment, Applied and Environmental Microbiology, 76, 5097, 10.1128/AEM.00411-10 Josephson, 1993, Polymerase chain reaction detection of nonviable bacterial pathogens, Applied and Environmental Microbiology, 59, 3513, 10.1128/AEM.59.10.3513-3515.1993 Klijn, 1997, Genotypical and phenotypical characterization of Bacillus sporothermodurans strains, surviving UHT sterilization, International Dairy Journal, 7, 421, 10.1016/S0958-6946(97)00029-0 Liang, 2011, Detection of viable Salmonella in lettuce by propidium monoazide real-time PCR, Journal of Food Science, 76, M234, 10.1111/j.1750-3841.2011.02123.x Løvdal, 2011, Propidium monoazide combined with real-time quantitative PCR underestimates heat-killed Listeria innocua, Journal of Microbiological Methods, 85, 164, 10.1016/j.mimet.2011.01.027 Mamlouk, 2012, Quantification of viable Brochothrix thermosphacta in cooked shrimp and salmon by real-time PCR, Food Microbiology, 30, 173, 10.1016/j.fm.2011.09.012 Nocker, 2006, Comparison of propidium monoazide with ethidium monoazide for differentiation of live vs. dead bacteria by selective removal of DNA from dead cells, Journal of Microbiology Methods, 67, 310, 10.1016/j.mimet.2006.04.015 Nocker, 2007, Use of propidium monoazide for live/dead distinction in microbial ecology, Applied and Environment Microbiology, 73, 5111, 10.1128/AEM.02987-06 Nogva, 2003, Ethidium monoazide for DNA-based differentiation of viable and dead bacteria by 5′-nuclease PCR, BioTechniques, 34, 804, 10.2144/03344rr02 Pettersson, 1996, Bacillus sporothermodurans, a new species producing highly heat-resistant endospores, International Journal of Systematic Bacteriology, 46, 759, 10.1099/00207713-46-3-759 Rademaker, 1997, Characterization and classification of microbes by REP-PCR genomic fingerprinting and computer-assisted pattern analysis Rossen, 1992, Inhibition of PCR by components of food samples, microbial diagnostic assays and DNA extraction solutions, International Journal of Food Microbiology, 17, 37, 10.1016/0168-1605(92)90017-W Scheldeman, 2006, Bacillus sporothermodurans and other highly heat-resistant spore formers in milk, Journal of Applied Microbiology, 101, 542, 10.1111/j.1365-2672.2006.02964.x Scheldeman, 2002, Polymerase chain reaction identification of Bacillus sporothermodurans from dairy sources, Journal of Applied Microbiology, 92, 983, 10.1046/j.1365-2672.2002.01611.x Tabit, 2010, The effects of wet heat treatment on the structural and chemical components of Bacillus sporothermodurans spores, International Journal of Food Microbiology, 140, 207, 10.1016/j.ijfoodmicro.2010.03.033 Tabit, 2011, Incidence and survival of Bacillus sporothermodurans during processing of UHT milk, British Food Journal, 113, 505, 10.1108/00070701111123989 Taskin, 2011, Selective quantification of viable Escherichia coli in biosolids by quantitative PCR with propidium monoazide modification, Applied and Environmental Microbiology, 77, 4329, 10.1128/AEM.02895-10 Torkar, 2008, The Microbiological quality of raw milk after introducing the two day's milk collecting system, Acta Agriculturae Slovenica, 92, 61 Vesper, 2008, Quantifying fungal viability in air and water samples using quantitative PCR after treatment with propidium monoazide (PMA), Journal of Microbiological Methods, 72, 180, 10.1016/j.mimet.2007.11.017 Yáñez, 2011, Quantification of viable Legionella pneumophila cells using propidium monoazide combined with quantitative PCR, Journal of Microbiology Methods, 85, 124, 10.1016/j.mimet.2011.02.004 Yang, 2011, Use of propidium monoazide and quantification PCR for differentiation of viable Escherichia coli from E. coli killed by mild or pasteurizing heat treatments, Food Microbiology, 28, 1478, 10.1016/j.fm.2011.08.013