The Alkaline Comet Assay: Towards Validation in Biomonitoring of DNA Damaging Exposures

Basic and Clinical Pharmacology and Toxicology - Tập 98 Số 4 - Trang 336-345 - 2006
Peter Möller1
1Institute of Public Health, University of Copenhagen, Øster Farimagsgade 5, Building B, 2nd Floor, P.O. Box 2099, DK-1014 Copenhagen K, Denmark. [email protected]

Tóm tắt

Abstract: Generation of DNA damage is considered to be an important initial event in carcinogenesis. The single cell gel electrophoresis (comet) assay is a technically simple and fast method that detects genotoxicity in virtually any mammalian cell type without requirement for cell culture. This review discusses the strength of the comet assay in biomonitoring at its present state of validation. The simple version of the alkaline comet assay detects DNA migration caused by strand breaks, alkaline labile sites, and transient repair sites. By incubation with bacterial glycosylase/endonuclease enzymes, broad classes of oxidative DNA damage, alkylations, and ultraviolet light‐induced photoproducts are detected as additional DNA migration. The most widely measured enzyme sensitive sites have been those detected by formamidopyrimidine DNA glycosylase (FPG) and endonuclease III (ENDOIII). Reports from biomonitoring studies show that the basal level of DNA damage in leukocytes is influenced be a variety of lifestyle and environmental exposures, including exercise, air pollution, sunlight, and diet. Although not all types of carcinogenic exposures should be expected to damage DNA in leukocytes, the comet assay is a valuable method for detection of genotoxic exposure in humans. However, the predictive value of the comet assay is unknown because it has not been investigated in prospective cohort studies. Also, it is important that the performance of the assay is investigated in multi‐laboratory validation trials. As a tool in risk assessment the comet assay can be used in characterization of hazards.

Từ khóa


Tài liệu tham khảo

Ahnström G., 1981, DNA repair: A laboratory manual research procedures, 403

10.1093/carcin/bgh353

10.1385/MB:26:3:249

10.1016/0921-8777(94)00043-6

10.1289/ehp.96104s3465

10.1002/(SICI)1098-2280(1997)30:2<139::AID-EM6>3.0.CO;2-I

10.1093/mutage/16.4.297

10.1016/S1383-5718(00)00075-9

10.1096/fasebj.12.14.1491

10.1016/S0891-5849(03)00041-8

ESCODD (European Standards Committee on Oxidative DNA Damage), 2005, Establishing the background level of base oxidation in human lymphocyte DNA: results of an inter‐laboratory validation study, FASEB J., 19, 82, 10.1096/fj.04-1767fje

10.1016/S1383-5742(99)00053-8

10.1016/S1383-5718(02)00248-6

10.1016/S0027-5107(04)00239-8

Hagmar L., 1998, Chromosome aberrations in lymphocytes predict human cancer: A report from the European study group on cytogenetic biomarkers and health (ESCH), Cancer Res., 58, 4117

10.1016/S1383-5718(99)00083-2

10.1007/BF00385645

10.1021/bi00666a013

10.1158/1055-9965.EPI-04-0295

10.2307/3579703

10.1016/j.mrrev.2005.10.001

Møller P., 2005, Genotoxicity of environmental agents assessed by the alkaline comet assay, Basic Clin. Pharmacology Toxicology, 96, 1

10.1093/ajcn/76.2.303

10.1016/j.mrfmmm.2004.02.018

Møller P., 2000, The comet assay as a rapid test in biomonitoring occupational exposure to DNA‐damaging agents and effect of confounding factors, Cancer Epidemiol. Biomarkers Prev., 9, 1005

10.1096/fj.01-0386com

Møller P., 2003, No effect of 600 g fruit and vegetables per day on oxidative DNA damage and repair in healthy human non‐smokers, Cancer Epidemiol. Biomarkers Prev., 12, 1016

10.1080/10715760400016824

10.1016/j.mrfmmm.2004.02.020

10.1007/s00394-004-0470-6

10.1093/ajcn/67.6.1210

10.2307/3577279

Olive P. L., 2002, The comet assay. An overview of techniques, Meth. Mol. Biol., 203, 179

10.1158/1055-9965.EPI-04-0509

10.1080/095530099140807

10.1080/1071576031000150788

Rothman N., 1995, Biomarkers and occupational health: Progress and perspectives, 109

10.1080/10408440008951123

10.1093/jn/134.12.3362

10.1016/j.mrgentox.2005.07.001

10.1016/0014-4827(88)90265-0

10.1093/carcin/bgg037

10.1016/j.mrgentox.2003.08.002

Sørensen M., 2003, Personal exposure to PM2.5 and biomarkers of DNA damage, Cancer Epidemiol. Biomarkers Prev., 12, 191

Tice R. R., 1995, Environmental mutagenesis, 315

10.1093/mutage/18.2.139

10.1289/ehp.7562