Hydrophobicity of Amino Acid Residues in Globular Proteins

American Association for the Advancement of Science (AAAS) - Tập 229 Số 4716 - Trang 834-838 - 1985
George D. Rose1, Ari Geselowitz1, Glenn J. Lesser1, Richard Lee1, Micheal H. Zehfus1
1Department of Biological Chemistry, The Milton S. Hershey Medical Center, The Pennsylvania State University, Hershey 17033

Tóm tắt

During biosynthesis, a globular protein folds into a tight particle with an interior core that is shielded from the surrounding solvent. The hydrophobic effect is thought to play a key role in mediating this process: nonpolar residues expelled from water engender a molecular interior where they can be buried. Paradoxically, results of earlier quantitative analyses have suggested that the tendency for nonpolar residues to be buried within proteins is weak. However, such analyses merely classify residues as either "exposed" or "buried." In the experiment reported in this article proteins of known structure were used to measure the average area that each residue buries upon folding. This characteristic quantity, the average area buried, is correlated with residue hydrophobicity.

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