Phylogenetic analysis of the coryneform bacteria by 5S rRNA sequences
Tóm tắt
Từ khóa
Tài liệu tham khảo
Dekio , S. , R. Yamasaki , J. Jidoi , H. Hori , and S. Osawa . 1984 . Secondary structure and phylogeny of Staphylococcus and Micrococcus 5S rRNAs . J. Bacteriol. 159 : 233 - 237 .
Donis-Kelier , H. 1980 . Phy M: an RNase activity specific for U and A residues useful in RNA sequence analysis . Nucleic Acids Res. 8 : 3133 - 3142 .
Erdmann V. A. and J. Wolters. 1986. Collection of published 5S 5.8S and 4.5S ribosomal RNA sequences. Nucleic Acids Res. 14(Suppl.):rl-rS9.
Hori , H. , and S. Osawa . 1982 . The phylogenic structure of the metabacteria. Zentralbl. Bakteriol. Parasitenkd . Infektionskr. Hyg. Abt. 1 Orig. Reihe C 3 : 18 - 30 .
Hori , H. , and S. Osawa . 1986 . Evolutionary change in 5S rRNA secondary structure and a phylogenic tree of 352 5S rRNA species . BioSystems 19 : 163 - 172 .
Kimura , M. 1980 . A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences . J. Mol. Evol. 16 : 111 - 120 .
Kimura M. 1983. The neutral theory of mnolecular evolution p. 34-50. Cambridge University Press Cambridge.
Komagata , K. , K. Yamada , and H. Ogawa . 1969 . Taxonormic studies on coryneform bacteria. I. Division of bacterial cells . J. Gen. Appl. Microbiol. 15 : 243 - 259 .
Lane , D. J. , D. A. Stahl , G. J. Olsen , D. J. Heller , and N. R. Pace . 1985 . Phylogenetic analysis of the genera Thiobacillus and Thiomicrospira by SS rRNA sequences . J. Bacteriol. 163 : 75 - 81 .
MacDonell , M. T. , and R. R. Colwell . 1985 . Phylogeny of the Vibrionaceae, and recommendation for two new genera, Listonella and Shewanella . Syst. Appl. Microbiol. 6 : 171 - 182 .
Peattie , D. A. 1979 . Direct chemical method for sequencing RNA . Proc. Natl. Acad. Sci. USA 76 : 1760 - 1764 .
Pribula , C. D. , G. E. Fox , and C. R. Woese . 1976 . Nucleotide sequence of Clostridium pasteurianum 5S rRNA . FEBS Lett. 64 : 350 - 352 .
Rogers , M. J. , J. Simmons , R. T. Walker , W. G. Welsburg , C. R. Woese , R. S. Tanner , I. M. Robinson , D. A. Stahl , G. Olsen , R. H. Leach , and J. Maniloff . 1985 . Construction of the mycoplasma evolutionary tree from SS rRNA sequence data . Proc. Natl. Acad. Sci. USA 82 : 1160 - 1164 .
Schleifer , K. H. , and 0. Kandler . 1972 . Peptidoglycan types of bacterial cell walls and theit taxonomic implications . Bacteriol. Rev. 36 : 407 - 477 .
Simoncsits , A. 1980 . 3' Terminal labeling of RNA with beta-32P-pyrophosphate group and its application to the sequence analysis of SS RNA from Streptomyces griseus . Nucleic Acids Res. 8 : 4111 - 4124 .
Sneath P. H. A. and R. R. Sokal. 1973. Numerical taxonomy p. 227-240. W. H. Freeman and Co. San Francisco.
Stackebrandt , E. , B. J. Lewis , and C. R. Woese . 1980 . The phylogenetic structure of the coryneform group of bacteria. Zentralbl. Bakteriol. Parasitenkd . Infektionskr. Hyg. Abt. 1 Orig. Reihe C 1 : 137 - 149 .
Suzuki , K. , and K. Komagata . 1983 . Taxonomic significance of cellular fatty acid composition in some coryneform bacteria . Int. J. Syst. Bacteriol. 33 : 188 - 200 .
Tinoco , I. , Jr. , 0. C. Uhlenbeck , and M. D. Levine . 1971 . Estimation of secondary structure in ribonucleic acids . Nature (London) 230 : 362 - 367 .
Yamada , K. , and K. Komagata . 1972 . Taxonomic studies on coryneform bacteria. IV. Morphological, cultural, biochemical, and physiological characteristics . J. Gen. Appl. Microbiol. 18 : 399 - 416 .
