ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R

Bioinformatics (Oxford, England) - Tập 35 Số 3 - Trang 526-528 - 2019
Emmanuel Paradis1, Klaus Schliep2
1ISEM, IRD, Univ. Montpellier, CNRS, EPHE, Montpellier, France
2Department of Biology, University of Massachusetts Boston, Boston, MA, USA

Tóm tắt

Abstract Summary After more than fifteen years of existence, the R package ape has continuously grown its contents, and has been used by a growing community of users. The release of version 5.0 has marked a leap towards a modern software for evolutionary analyses. Efforts have been put to improve efficiency, flexibility, support for ‘big data’ (R’s long vectors), ease of use and quality check before a new release. These changes will hopefully make ape a useful software for the study of biodiversity and evolution in a context of increasing data quantity. Availability and implementation ape is distributed through the Comprehensive R Archive Network: http://cran.r-project.org/package=ape. Further information may be found at http://ape-package.ird.fr/.

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Tài liệu tham khảo

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R Core Team, 2017, R: A Language and Environment for Statistical Computing.

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Bioinformatics (Oxford, England)

Tập 35 Số 3

526-528

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