Zebrafish miR-462-731 is required for digestive organ development
Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics - Tập 34 - Trang 100679 - 2020
Tài liệu tham khảo
Bielczyk-Maczynska, 2015, The ribosome biogenesis protein Nol9 is essential for definitive hematopoiesis and pancreas morphogenesis in zebrafish, PLoS Genet., 11, 10.1371/journal.pgen.1005677
Bolger, 2014, Trimmomatic: a flexible trimmer for Illumina sequence data, Bioinformatics., 30, 2114, 10.1093/bioinformatics/btu170
Chen, 2005, Loss of function of def selectively up-regulates Delta113p53 expression to arrest expansion growth of digestive organs in zebrafish, Genes Dev., 19, 2900, 10.1101/gad.1366405
Di Leva, 2013, Estrogen mediated-activation of miR-191/425 cluster modulates tumorigenicity of breast cancer cells depending on estrogen receptor status, PLoS Genet., 9, 10.1371/annotation/92dfa670-d431-4d68-b70b-706df1f93e46
Elyakim, 2010, hsa-miR-191 is a candidate oncogene target for hepatocellular carcinoma therapy, Cancer Res., 70, 8077, 10.1158/0008-5472.CAN-10-1313
Farber, 2001, Genetic analysis of digestive physiology using fluorescent phospholipid reporters, Science., 292, 1385, 10.1126/science.1060418
Fromont-Racine, 2003, Ribosome assembly in eukaryotes, Gene., 313, 17, 10.1016/S0378-1119(03)00629-2
He, 2017, Ribosome biogenesis protein Urb1 acts downstream of mTOR complex 1 to modulate digestive organ development in zebrafish, J. Genet. Genomics, 44, 567, 10.1016/j.jgg.2017.09.013
Her, 2003, In vivo studies of liver-type fatty acid binding protein (L-FABP) gene expression in liver of transgenic zebrafish (Danio rerio), FEBS Lett., 538, 125, 10.1016/S0014-5793(03)00157-1
Howarth, 2013, Defining hepatic dysfunction parameters in two models of fatty liver disease in zebrafish larvae, Zebrafish., 10, 199, 10.1089/zeb.2012.0821
Hu, 2016, Liver-enriched gene 1, a glycosylated secretory protein, binds to FGFR and mediates an anti-stress pathway to protect liver development in zebrafish, PLoS Genet., 12, 10.1371/journal.pgen.1005881
Huang, 2008, Mypt1-mediated spatial positioning of Bmp2-producing cells is essential for liver organogenesis, Development., 135, 3209, 10.1242/dev.024406
Huang, 2015, The zebrafish miR-462/miR-731 cluster is induced under hypoxic stress via hypoxia-inducible factor 1alpha and functions in cellular adaptations, FASEB J., 29, 4901, 10.1096/fj.14-267104
Huang, 2019, Zebrafish miR-462-731 regulates hematopoietic specification and pu.1-dependent primitive myelopoiesis, Cell Death Differ., 26, 1531, 10.1038/s41418-018-0234-0
Jacob, 2015, DNA hypomethylation induces a DNA replication-associated cell cycle arrest to block hepatic outgrowth in uhrf1 mutant zebrafish embryos, Development., 142, 510, 10.1242/dev.115980
Kang, 2018, miR-191 inhibition induces apoptosis through reactivating secreted frizzled-related protein-1 in cholangiocarcinoma, Cell. Physiol. Biochem., 49, 1933, 10.1159/000493654
Kimmel, 1995, Stages of embryonic development of the zebrafish, Dev. Dyn., 203, 253, 10.1002/aja.1002030302
Korzh, 2001, Developmental analysis of ceruloplasmin gene and liver formation in zebrafish, Mech. Dev., 103, 137, 10.1016/S0925-4773(01)00330-6
Kuusela, 2016, Tankyrase inhibition aggravates kidney injury in the absence of CD2AP, Cell Death Dis., 7, 10.1038/cddis.2016.217
Lancman, 2013, Specification of hepatopancreas progenitors in zebrafish by hnf1ba and wnt2bb, Development., 140, 2669, 10.1242/dev.090993
Laudadio, 2012, A feedback loop between the liver-enriched transcription factor network and miR-122 controls hepatocyte differentiation, Gastroenterology., 142, 119, 10.1053/j.gastro.2011.09.001
Li, 2017, MicroRNA-191 acts as a tumor promoter by modulating the TET1-p53 pathway in intrahepatic cholangiocarcinoma, Hepatology., 66, 136, 10.1002/hep.29116
Li, 2017, MiR-145 mediates zebrafish hepatic outgrowth through progranulin A signaling, PLoS One, 12
Lorent, 2004, Inhibition of Jagged-mediated Notch signaling disrupts zebrafish biliary development and generates multi-organ defects compatible with an Alagille syndrome phenocopy, Development., 131, 5753, 10.1242/dev.01411
Lu, 2013, EpCAM is an endoderm-specific Wnt derepressor that licenses hepatic development, Dev. Cell, 24, 543, 10.1016/j.devcel.2013.01.021
Mao, 2001, LDL-receptor-related protein 6 is a receptor for Dickkopf proteins, Nature., 411, 321, 10.1038/35077108
Mao, 2002, Kremen proteins are Dickkopf receptors that regulate Wnt/beta-catenin signalling, Nature., 417, 664, 10.1038/nature756
Mayer, 2003, Nil per os encodes a conserved RNA recognition motif protein required for morphogenesis and cytodifferentiation of digestive organs in zebrafish, Development., 130, 3917, 10.1242/dev.00600
Narla, 2010, Ribosomopathies: human disorders of ribosome dysfunction, Blood., 115, 3196, 10.1182/blood-2009-10-178129
Negishi, 2010, Retinoic acid signaling positively regulates liver specification by inducing wnt2bb gene expression in medaka, Hepatology., 51, 1037, 10.1002/hep.23387
Ober, 2006, Mesodermal Wnt2b signalling positively regulates liver specification, Nature., 442, 688, 10.1038/nature04888
Pack, 1996, Mutations affecting development of zebrafish digestive organs, Development., 123, 321, 10.1242/dev.123.1.321
Qin, 2014, Nom1 mediates pancreas development by regulating ribosome biogenesis in zebrafish, PLoS One, 9
Sadler, 2005, A genetic screen in zebrafish identifies the mutants vps18, nf2 and foie gras as models of liver disease, Development., 132, 3561, 10.1242/dev.01918
Schyth, 2015, Two virus-induced microRNAs known only from teleost fishes are orthologues of microRNAs involved in cell cycle control in humans, PLoS One, 10, 10.1371/journal.pone.0132434
Shin, 2007, Bmp and Fgf signaling are essential for liver specification in zebrafish, Development., 134, 2041, 10.1242/dev.000281
Shin, 2012, Intrinsic and extrinsic modifiers of the regulative capacity of the developing liver, Mech. Dev., 128, 525, 10.1016/j.mod.2012.01.005
Stafford, 2002, Retinoic acid signaling is required for a critical early step in zebrafish pancreatic development, Curr. Biol., 12, 1215, 10.1016/S0960-9822(02)00929-6
Tao, 2009, Liver development in zebrafish (Danio rerio), J. Genet. Genomics, 36, 325, 10.1016/S1673-8527(08)60121-6
Thisse, 2008, High-resolution in situ hybridization to whole-mount zebrafish embryos, Nat. Protoc., 3, 59, 10.1038/nprot.2007.514
Wallace, 2001, Zebrafish hhex regulates liver development and digestive organ chirality, Genesis., 30, 141, 10.1002/gene.1050
Wang, 2012, Ribosome biogenesis factor Bms1-like is essential for liver development in zebrafish, J. Genet. Genomics, 39, 451, 10.1016/j.jgg.2012.07.007
Yao, 2010, Kzp controls canonical wnt8 signaling to modulate dorsoventral patterning during zebrafish gastrulation., J. Biol. Chem, 285, 42086, 10.1074/jbc.M110.161554
Yi, 2018, Yap1/Taz are essential for the liver development in zebrafish, Biochem. Biophys. Res. Commun., 503, 131, 10.1016/j.bbrc.2018.05.196
Yue, 2008, Downregulation of Dkk3 activates beta-catenin/TCF-4 signaling in lung cancer, Carcinogenesis., 29, 84, 10.1093/carcin/bgm267
Zhang, 2014, Heme acts through the Bach1b/Nrf2a-MafK pathway to regulate exocrine peptidase precursor genes in porphyric zebrafish, Dis. Model. Mech., 7, 837, 10.1242/dmm.014951