Whole-genome sequencing for analysis of an outbreak of meticillin-resistant Staphylococcus aureus: a descriptive study

The Lancet Infectious Diseases - Tập 13 Số 2 - Trang 130-136 - 2013
Simon R. Harris1, Edward J. P. Cartwright2,3, M. Estée Török2,4,3, Matthew T. G. Holden1, Nicholas M. Brown2,4, Amanda Ogilvy‐Stuart4, Matthew J. Ellington2, Michael A. Quail1, Stephen D. Bentley1, Julian Parkhill1, Sharon J. Peacock2,4,3,5,1
1Wellcome Trust Sanger Institute, Cambridge, UK
2Cambridge Microbiology and Public Health Laboratory, Cambridge, UK
3Department of Medicine, University of Cambridge, Cambridge, UK
4Cambridge University Hospitals National Health Service Foundation Trust, Cambridge, UK
5Department of Pathology, University of Cambridge, Cambridge, UK

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Jain, 2011, Veterans Affairs initiative to prevent meticillin-resistant Staphylococcus aureus infections, N Engl J Med, 364, 1419, 10.1056/NEJMoa1007474

Johnson, 2012, Mandatory surveillance of meticillin-resistant Staphylococcus aureus (MRSA) bacteraemia in England: the first 10 years, J Antimicrob Chemother, 67, 802, 10.1093/jac/dkr561

Ellington, 2010, Decline of EMRSA-16 amongst meticillin-resistant Staphylococcus aureus causing bacteraemias in the UK between 2001 and 2007, J Antimicrob Chemother, 65, 446, 10.1093/jac/dkp448

Grundmann, 2010, Geographic distribution of Staphylococcus aureus causing invasive infections in Europe: a molecular-epidemiological analysis, PLoS Med, 7, e1000215, 10.1371/journal.pmed.1000215

Fridkin, 2005, Meticillin-resistant Staphylococcus aureus disease in three communities, N Engl J Med, 352, 1436, 10.1056/NEJMoa043252

Pan, 2005, Population dynamics of nasal strains of meticillin-resistant Staphylococcus aureus and their relation to community-associated disease activity, J Infect Dis, 192, 811, 10.1086/432072

Tenover, 2008, Characterization of Staphylococcus aureus isolates from nasal cultures collected from individuals in the United States in 2001 to 2004, J Clin Microbiol, 46, 2837, 10.1128/JCM.00480-08

Gonzalez, 2006, Community-associated strains of meticillin-resistant Staphylococccus aureus as the cause of healthcare-associated infection, Infect Control Hosp Epidemiol, 27, 1051, 10.1086/507923

Harris, 2010, Evolution of MRSA during hospital transmission and intercontinental spread, Science, 327, 469, 10.1126/science.1182395

Köser, 2012, A neonatal MRSA outbreak investigation using rapid whole genome sequencing, N Engl J Med, 363, 2267, 10.1056/NEJMoa1109910

2011

Quail, 2012, Optimal enzymes for amplifying sequencing libraries, Nat Methods, 9, 10, 10.1038/nmeth.1814

Eyre, 2012, A pilot study of rapid benchtop sequencing of Staphylococcus aureus and Clostridium difficile for outbreak detection and surveillance, BMJ Open, 2, e001124, 10.1136/bmjopen-2012-001124

Moran, 2006, Meticillin-resistant S aureus infections among patients in the emergency department, N Engl J Med, 355, 666, 10.1056/NEJMoa055356

Jones, 2006, Family outbreaks of invasive community-associated meticillin-resistant Staphylococcus aureus infection, Clin Infect Dis, 42, e76, 10.1086/503265

Talan, 2011, Comparison of Staphylococcus aureus from skin and soft-tissue infections in US emergency department patients, 2004 and 2008, Clin Infect Dis, 53, 144, 10.1093/cid/cir308