What would be the diversity patterns of medium- to large-bodied mammals if the fragmented Atlantic Forest was a large metacommunity?
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Allen, 2011, Why the leopard got its spots: relating pattern development to ecology in felids, Proc. R. Soc. B, 278, 1373, 10.1098/rspb.2010.1734
Almeida-Neto, 2008, A consistent metric for nestedness analysis in ecological systems: reconciling concept and measurement, Oikos, 117, 1227, 10.1111/j.0030-1299.2008.16644.x
Andrén, 1994, Effects of habitat fragmentation on birds and mammals in landscapes with different proportions of suitable habitat: a review, Oikos, 71, 355, 10.2307/3545823
Bascompte, 2003, The nested assembly of plant–animal mutualistic networks, Proc. Natl. Acad. Sci., 100, 9383, 10.1073/pnas.1633576100
Baselga, 2010, Multiplicative partition of true diversity yields independent alpha and beta components; additive partition does not, Ecology, 91, 1974, 10.1890/09-0320.1
Baselga, 2010, Partitioning the turnover and nestedness components of beta diversity, Glob. Ecol. Biogeogr., 19, 134, 10.1111/j.1466-8238.2009.00490.x
Baselga, 2012, The relationship between species replacement, dissimilarity derived from nestedness, and nestedness, Glob. Ecol. Biogeogr., 21, 1223, 10.1111/j.1466-8238.2011.00756.x
Bogoni, 2013, The Influence of Landscape and Microhabitat on the Diversity of Large- and Medium-Sized Mammals in Atlantic Forest Remnants in a Matrix of Agroecosystem and Silviculture, ISRN Forestry, 2013, 1, 10.1155/2013/282413
Bogoni, 2016, Landscape features lead to shifts in communities of medium to large-bodied mammals in subtropical Atlantic Forest, J. Mammal., 97, 713, 10.1093/jmammal/gyv215
Bogoni, 2016, Contributions of the mammal community, habitat structure, and spatial distance to dung beetle community structure, Biodivers. Conserv., 25, 1661, 10.1007/s10531-016-1147-1
Bolker, 2008
Borcard, 2004, Dissecting the spatial structure of ecological data at multiple scales, Ecology, 85, 1826, 10.1890/03-3111
Borcard, 2011
Bornholdt, 2013, Taxonomic revision of the genus Galictis (Carnivora: Mustelidae): species delimitation, morphological diagnosis, and refined mapping of geographical distribution, Zool. J. Linnean Soc., 167, 449, 10.1111/j.1096-3642.2012.00859.x
Bowman, 2002, Dispersal distance of mammals is proportional to home range size, Ecology, 83, 2049, 10.1890/0012-9658(2002)083[2049:DDOMIP]2.0.CO;2
Brown, 2004, Toward a metabolic theory of ecology, Ecology, 85, 1771, 10.1890/03-9000
Canale, 2012, Pervasive defaunation of forest remnants in a tropical biodiversity hotspot, PLoS ONE, 7, 10.1371/journal.pone.0041671
Caryl, 2013, Permeability of the urban matrix to arboreal gliding mammals: sugar gliders in Melbourne, Australia, Austral Ecol., 38, 609, 10.1111/aec.12006
Ceballos, 2015, Accelerated modern human–induced species losses: entering the sixth mass extinction, Sci. Adv., 1, 10.1126/sciadv.1400253
Chao, 2015, Estimating diversity and entropy profiles via discovery rates of new species, Methods Ecol. Evol., 6, 873, 10.1111/2041-210X.12349
Chao, 2012, Proposing a resolution to debates on diversity partitioning, Ecology, 93, 2037, 10.1890/11-1817.1
Chase, 2014, Spatial scale resolves the niche versus neutral theory debate, J. Veg. Sci., 25, 319, 10.1111/jvs.12159
Chiarello, 2000, Density and populations size of mammals in remnants of Brazilian Atlantic Forest, Conserv. Biol., 14, 1649, 10.1046/j.1523-1739.2000.99071.x
Core Team, 2016
Davidson, 2009, Multiple ecological pathways to extinction in mammals, Proc. Natl. Acad. Sci., 106, 10702, 10.1073/pnas.0901956106
Declerck, 2011, Scale dependency of processes structuring metacommunities of cladocerans in temporary pools of High-Andes wetlands, Ecography, 34, 296, 10.1111/j.1600-0587.2010.06462.x
Dirzo, 2014, Defaunation in the Anthropocene, Science, 345, 401, 10.1126/science.1251817
Dobson, 1990
Dormann, 2008, 8, 8
Dray, 2007, The ade4 package: implementing the duality diagram for ecologists, J. Stat. Softw., 22, 1, 10.18637/jss.v022.i04
Ellison, 2010, Partitioning diversity, Ecology, 91, 1962, 10.1890/09-1692.1
Galetti, 2013, Ecological and evolutionary consequences of living in a defaunated world, Biol. Conserv., 163, 1, 10.1016/j.biocon.2013.04.020
Galetti, 2009, Priority areas for the conservation of Atlantic forest large mammals, Biol. Conserv., 142, 1229, 10.1016/j.biocon.2009.01.023
Galetti, 2015, Defaunation of large mammals leads to an increase in seed predation in the Atlantic forests, Glob. Ecol. Conserv., 3, 824, 10.1016/j.gecco.2015.04.008
Gonzalez, 2005, Local and regional community dynamics in fragmented landscapes, 147
Google Earth
Gotelli, 1996
Gotelli, 2012, Statistical challenges in null model analysis, Oikos, 121, 171, 10.1111/j.1600-0706.2011.20301.x
Graipel, 2016, Características associadas ao risco de extinção nos mamíferos terrestres da Mata Atlântica, Oecol. Australis, 20, 81, 10.4257/oeco.2016.2001.07
Guimarães, 2006, Improving the analyses of nestedness for large sets of matrices, Environ. Model. Softw., 21, 1512, 10.1016/j.envsoft.2006.04.002
Haddad, 2003, Corridor use by diverse taxa, Ecology, 84, 609, 10.1890/0012-9658(2003)084[0609:CUBDT]2.0.CO;2
Hérault, 2007, Using life-history traits to achieve a functional classification of habitats, Appl. Veg. Sci., 10, 73, 10.1111/j.1654-109X.2007.tb00505.x
Hill, 1973, Diversity and evenness: a unifying notation and its consequences, Ecology, 54, 427, 10.2307/1934352
Hoffmann, 2008, Is there a “true” diversity?, Ecol. Econ., 65, 213, 10.1016/j.ecolecon.2008.01.009
Holt, 2003, On the evolutionary ecology of species' ranges, Evol. Ecol. Res., 5, 159
Holyoak, 2005
Hu, 2007, Species diversity in local neutral communities, Am. Nat., 170, 844, 10.1086/522935
Hubbell, 2001
IBGE
IUCN
Jenkins, 2015, Patterns of vertebrate diversity and protection in Brazil, PLos One, 10, 10.1371/journal.pone.0145064
Johnson, 2004, Model selection in ecology and evolution, Trends Ecol. Evol., 19, 101, 10.1016/j.tree.2003.10.013
Jorge, 2013, Mammal defaunation as surrogate of trophic cascades in a biodiversity hotspot, Biol. Conserv., 163, 49, 10.1016/j.biocon.2013.04.018
Jost, 2006, Entropy and diversity, Oikos, 113, 363, 10.1111/j.2006.0030-1299.14714.x
Jost, 2007, Partitioning diversity into independent alpha and beta components, Ecology, 88, 2427, 10.1890/06-1736.1
Koleff, 2003, Are there latitudinal gradients in species turnover?, Glob. Ecol. Biogeogr., 12, 483, 10.1046/j.1466-822X.2003.00056.x
Koleff, 2003, Measuring beta diversity for presence–absence data, J. Anim. Ecol., 72, 367, 10.1046/j.1365-2656.2003.00710.x
Lande, 1996, Statistics and partitioning of species diversity, and similarity among multiple communities, Oikos, 76, 5, 10.2307/3545743
Legendre, 2013, Beta diversity as the variance of community data: dissimilarity coefficients and partitioning, Ecol. Lett., 16, 951, 10.1111/ele.12141
Legendre, 1998
Legendre, 2005, Analyzing beta diversity: partitioning the spatial variation of community composition data, Ecol. Monogr., 75, 435, 10.1890/05-0549
Legendre, 2015, Should the Mantel test be used in spatial analysis?, Methods Ecol. Evol., 6, 1239, 10.1111/2041-210X.12425
Leibold, 2004, The metacommunity concept: a framework for multi-scale community ecology, Ecol. Lett., 7, 601, 10.1111/j.1461-0248.2004.00608.x
Logue, 2011, Empirical approaches to metacommunities: a review and comparison with theory, Trends Ecol. Evol., 26, 482, 10.1016/j.tree.2011.04.009
Lyra-Jorge, 2008, Comparing methods for sampling large- and medium-sized mammals: camera traps and track plots, Eur. J. Wildl. Res., 54, 739, 10.1007/s10344-008-0205-8
MacKenzie, 2006
Magioli, 2015, Thresholds in the relationship between functional diversity and patch size for mammals in the Brazilian Atlantic Forest, Anim. Conserv., 18, 499, 10.1111/acv.12201
Magioli, 2016, Connectivity maintain mammal assemblages functional diversity within agricultural and fragmented landscapes, Eur. J. Wildl. Res., 10.1007/s10344-016-1017-x
Magurran, 2004
Marcon
Marcon, 2012, The decomposition of Shannon's entropy and a confidence interval for beta diversity, Oikos, 121, 516, 10.1111/j.1600-0706.2011.19267.x
Marcon, 2014, Generalization of the partitioning of Shannon diversity, PLoS One, 9, 10.1371/journal.pone.0090289
McDonald, 2005, Species compositional similarity and ecoregions: do ecoregion boundaries represent zones of high species turnover?, Biol. Conserv., 126, 24, 10.1016/j.biocon.2005.05.008
Melo, 2009, Environmental drivers of beta-diversity patterns in new-world birds and mammals, Ecography, 32, 226, 10.1111/j.1600-0587.2008.05502.x
Mikkelson, 2005, Niche-based vs. neutral models of ecological communities, Biol. Philos., 20, 557, 10.1007/s10539-005-5583-7
Munguía, 2008, Dispersal limitation and geographical distributions of mammals species, J. Biogeogr., 35, 1879, 10.1111/j.1365-2699.2008.01921.x
Myers, 2000, Biodiversity hotspots for conservation priorities, Nature, 403, 853, 10.1038/35002501
Nichols, 1998, Inference methods for spatial variation in species richness and community composition when not all species are detected, Conserv. Biol., 12, 1390, 10.1111/j.1523-1739.1998.97331.x
Oksanen
Oliveira, 2016, Species and functional diversity accumulate differently in mammals, Glob. Ecol. Biogeogr., 2016
Paglia, 2012, Lista Anotada dos Mamíferos do Brasil
Patterson, 1990, On the temporal development of nests subsets patterns of species composition, Oikos, 59, 330, 10.2307/3545143
Peters, 1983
Pires, 2014, Reconstructing past ecological networks: the reconfiguration of seed-dispersal interactions after megafaunal extinction, Oecologia, 175, 1247, 10.1007/s00442-014-2971-1
Püttker, 2013, Habitat specialization interacts with habitat amount to determine dispersal success of rodents in fragmented landscapes, J. Mammal., 94, 714, 10.1644/12-MAMM-A-119.1
Ribeiro, 2009, The Brazilian Atlantic Forest: how much is left, and how is the remaining forest distributed? Implications for conservation, Biol. Conserv., 142, 1141, 10.1016/j.biocon.2009.02.021
Ricklefs, 2006, Evolutionary diversification and the origin of the diversity-environment relationship, Ecology, 87, S3, 10.1890/0012-9658(2006)87[3:EDATOO]2.0.CO;2
Roemer, 2009, The ecological role of the mammalian mesocarnivore, Bioscience, 59, 165, 10.1525/bio.2009.59.2.9
Rosado, 2016, Eltonian shortfall due to the Grinnellian view: functional ecology between the mismatch of niche concepts, Ecography, 39, 1, 10.1111/ecog.01678
Rouquette, 2013, Species turnover and geographic distance in an urban river network, Divers. Distrib., 19, 1429, 10.1111/ddi.12120
Schmidt, 2011, Locomotion and postural behaviour, Adv. Sci. Res., 5, 23, 10.5194/asr-5-23-2010
Silva, 2014, Local and regional effects on community structure of dung beetles in a mainland-island scenario, PLoS ONE, 9, 10.1371/journal.pone.0111883
Steinitz, 2006, Environment, dispersal and patterns of species similarity, J. Biogeogr., 33, 1044, 10.1111/j.1365-2699.2006.01473.x
Uezu, 2008, Can agroforest woodlots work as stepping stones for birds in the Atlantic Forest region?, Biodivers. Conserv., 17, 1907, 10.1007/s10531-008-9329-0
Vangestel, 2013, Sex-biased dispersal at different geographical scales in a cooperative breeder from fragmented rainforest, PLos One, 8, 10.1371/journal.pone.0071624
Veech, 2010, Toward a unified view of diversity partitioning, Ecology, 91, 1988, 10.1890/09-1140.1
Voss, 2011, Revisionary notes on Neotropical porcupines (Rodentia: Erethizontidae) 3. An annotated checklist of the species of Coendou Lacépède, 1799, Am. Mus. Novit., 3720, 1, 10.1206/3720.2
Whittaker, 1960, Vegetation of the Siskiyou Mountains, Oregon and California, Ecol. Monogr., 30, 279, 10.2307/1943563
Whittaker, 1975
Whittaker, 2001, Scale and species richness: towards a general, hierarchical theory of species diversity, J. Biogeogr., 28, 453, 10.1046/j.1365-2699.2001.00563.x