Variance components and animal rankings for milk yield and fat yield in a multibreed dairy cattle population using genomic-polygenic, genomic and polygenic models

Bourdon, 2000, 540 Department of Livestock Development, 2015 Eaglen, 2013, Direct and maternal genetic relationships between calving ease, gestation length, milk production, fertility, type, and lifespan of Holstein-Friesian primiparous cows, J. Dairy Sci., 96, 4015, 10.3168/jds.2012-6229 Gao, 2012, Comparison on genomic predictions using three GBLUP methods and two single-step blending methods in the Nordic Holstein population, Genet. Sel. Evol., 44, 8, 10.1186/1297-9686-44-8 Gianola, 2009, Additive genetic variability and the Bayesian alphabet, Genetics, 183, 347, 10.1534/genetics.109.103952 Gilmour, 2006 Goddard, 2007, Genomic selection, J. Anim. Breed Genet., 124, 323, 10.1111/j.1439-0388.2007.00702.x Goddard, 2010, Genomic selection in livestock populations, Genet. Res. Camb., 92, 413, 10.1017/S0016672310000613 Habier, 2007, The impact of genetic relationship information on genome-assisted breeding values, Genetics, 77, 2389, 10.1534/genetics.107.081190 Haile-Mariam, 2013, Comparison of heritabilities of dairy traits in Australian Holstein-Friesian cattle from genomic and pedigree data and implications for genomic evaluations, J. Anim. Breed Genet., 30, 20, 10.1111/j.1439-0388.2012.01001.x Hayes, 2009, Accuracy of genomic breeding values in multi-breed dairy cattle populations, Genet. Sel. Evol., 41, 51, 10.1186/1297-9686-41-51 Jattawa, 2015, Comparison of genetic evaluations for milk yield and fat yield using a polygenic model and three genomic-polygenic models with different sets of SNP genotypes in Thai multibreed dairy cattle, Livest. Sci., 181, 58, 10.1016/j.livsci.2015.10.008 Koonawootrittriron, 2001, Prediction of 100-d and 305-d milk yields in a multibreed dairy herd in Thailand using monthly test-day records, Thai J. Agric. Sci., 34, 163 Koonawootrittriron, 2009, Genetic trends in a Holstein x other breeds multibreed dairy population in Central Thailand, Livest. Sci., 122, 186, 10.1016/j.livsci.2008.08.013 Legarra, 2010 Lillehammer, 2010, Effects of alternative genomic selection breeding schemes on genetic gain in dairy cattle Office of Agricultural Economics, 2014 Office of Agricultural Economics, 2015 Pollott, 2009, Genetic parameters of a biological lactation model: early lactation and secretion rate traits of dairy heifers, Animal, 3, 1085, 10.1017/S1751731109004650 Ritsawai, 2014, Fraction of cattle breeds and their influence on milk production of Thai dairy cattle, 25 Sargent, 1968, Test interval method of calculating dairy herd improvement association records, J. Dairy Sci., 51, 170, 10.3168/jds.S0022-0302(68)86943-7 SAS, 2003 Schaeffer, 2006, Strategy for applying genome-wide selection in dairy cattle, J. Anim. Breed. Genet., 123, 218, 10.1111/j.1439-0388.2006.00595.x Schopen, 2009, Genetic parameters for major milk proteins in Dutch Holstein-Friesians, J. Dairy Sci., 92, 1182, 10.3168/jds.2008-1281 Stoop, 2008, Genetic parameters for major milk fatty acids and milk production traits of Dutch Holstein-Friesians, J. Dairy Sci., 91, 385, 10.3168/jds.2007-0181 2014 Veerkamp, 2010, Estimation of heritability for dairy traits, combining pedigree with dense SNP information on some animals Veerkamp, 2011, Genomic and pedigree-based genetic parameters for scarcely recorded traits when some animals are genotyped, J. Dairy Sci., 94, 4189, 10.3168/jds.2011-4223 Vitezica, 2011, Bias is genomic predictions for populations under selection, Genet. Res. Camb., 93, 357, 10.1017/S001667231100022X Zhang, 2012, Progress of genome wide association study in domestic animals, J. Anim. Sci. Biotechnol., 3, 26, 10.1186/2049-1891-3-26