Utilization of the IR hybrid dysgenesis system in Drosophila to test in vivo mobilization of synthetic SINEs sharing 3′ homology with the I factor

Abad, 1989, A long interspersed repetitive element – the I factor of Drosophila teissieri – is able to transpose in different Drosophila species, Proc. Natl. Acad. Sci. USA, 86, 8887, 10.1073/pnas.86.22.8887 Akhmanova, 1998, Drosophila melanogaster histone H2B retropseudogene is inserted into a region rich in transposable elements, Genome, 41, 396, 10.1139/g98-035 Ashburner, 1989, Preparation of DNA from single flies, 108 Bennetzen, 2000, Transposable element contributions to plant gene and genome evolution, Plant Mol. Biol., 42, 251, 10.1023/A:1006344508454 Berezikov, 2000, A search for reverse transcriptase-coding sequences reveals new non-LTR retrotransposons in the genome of Drosophila melanogaster, Genome Biol., 1, 10.1186/gb-2000-1-6-research0012 Boeke, 1997, LINEs and Alus – the polyA connection, Nat. Genet., 16, 6, 10.1038/ng0597-6 Bucheton, 1976, Non-mendelian female sterility in Drosophila melanogaster: quantitative variations in the efficiency of inducer and reactive strains, Heredity, 36, 305, 10.1038/hdy.1976.38 Bucheton, 1984, The molecular basis of I-R hybrid dysgenesis in Drosophila melanogaster: identification, cloning, and properties of the I factor, Cell, 38, 153, 10.1016/0092-8674(84)90536-1 Chaboissier, 1995, A genetically tagged, defective I element can be complemented by actively transposing I factors in the germline of I-R dysgenic females in Drosophila melanogaster, Mol. Gen. Genet., 248, 434, 10.1007/BF02191643 Chaboissier, 2000, Retrotransposition of the I factor, a non-long terminal repeat retrotransposon of Drosophila, generates tandem repeats at the 3′ end, Nucleic Acids Res., 28, 2467, 10.1093/nar/28.13.2467 DeFranco, 1980, Two control regions for eukaryotic tRNA gene transcription, Proc. Natl. Acad. Sci. USA, 77, 3365, 10.1073/pnas.77.6.3365 Feng, 1996, Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition, Cell, 87, 905, 10.1016/S0092-8674(00)81997-2 Gilbert, 1999, CORE-SINEs: eukaryotic short interspersed retroposing elements with common sequence motifs, Proc. Natl. Acad. Sci. USA, 96, 2869, 10.1073/pnas.96.6.2869 Gilbert, 2000, Evolutionary inventions and continuity of CORE-SINEs in mammals, J. Mol. Biol., 298, 365, 10.1006/jmbi.2000.3695 Jeffs, 1991, Processed pseudogenes in Drosophila, Proc. R. Soc. Lond. B Biol. Sci., 244, 151, 10.1098/rspb.1991.0064 Jurka, 1997, Sequence patterns indicate an enzymatic involvement in integration of mammalian retroposons, Proc. Natl. Acad. Sci. USA, 84, 1872, 10.1073/pnas.94.5.1872 Jurka, 1998, Mammalians retroposons integrate at kinkable DNA sites, J. Biomol. Struct. Dyn., 15, 1, 10.1080/07391102.1998.10508987 Kazazian, 1998, Mobile elements and disease, Curr. Opin. Genet. Dev., 8, 343, 10.1016/S0959-437X(98)80092-0 Lavige, 1986, I-R system of hybrid dysgenesis in Drosophila melanogaster: further data on the arrest of development of the embryos from SF females, Biol. Cell., 56, 207 Logemann, 1987, Improved method for the isolation of RNA from plant tissues, Anal. Biochem., 163, 16, 10.1016/0003-2697(87)90086-8 Long, 1993, Natural selection and the origin of jingwei, a chimeric processed functional gene in Drosophila, Science, 260, 91, 10.1126/science.7682012 Ogiwara, 1999, Retropositional parasitism of SINEs on LINEs: identification of SINEs and LINEs in elasmobranchs, Mol. Biol. Evol., 16, 1238, 10.1093/oxfordjournals.molbev.a026214 Ohshima, 1996, The 3′ ends of tRNA-derived short interspersed repetitive elements are derived from the 3′ ends of long interspersed repetitive elements, Mol. Cell. Biol., 16, 3756, 10.1128/MCB.16.7.3756 Okada, 1995, Evolution of tRNA-derived SINEs, 61 Picard, 1976, Non-mendelian female sterility in Drosophila melanogaster: hereditary transmission of the I factor, Genetics, 83, 107, 10.1093/genetics/83.1.107 Pirrotta, 1988, Vectors for P-mediated transformation in Drosophila, Biotechnology, 10, 437 Pritchard, 1988, A cloned I-factor is fully functional in Drosophila melanogaster, Mol. Gen. Genet., 214, 533, 10.1007/BF00330491 Seleme, 1999, High-frequency retrotransposition of a marked I factor in Drosophila melanogaster correlates with a dynamic expression pattern of the ORF1 protein in the cytoplasm of oocytes, Genetics, 151, 761, 10.1093/genetics/151.2.761 Shedlock, 2000, SINE insertions: powerful tools for molecular systematics, BioEssays, 22, 148, 10.1002/(SICI)1521-1878(200002)22:2<148::AID-BIES6>3.0.CO;2-Z Silverman, 1979, The nucleotide sequence of lysine tRNA-2 from drosophila, Nucleic Acids Res., 6, 435, 10.1093/nar/6.2.435 Spradling, 1982, Genetic transformation of Drosophila with transposable element vectors, Science, 218, 348, 10.1126/science.6289436 Ullu, 1984, Alu sequences are processed 7SL RNA genes, Nature, 312, 171, 10.1038/312171a0 Wei, 2001, Human L1 retrotransposition: cis preference versus trans complementation, Mol. Cell. Biol., 21, 1429, 10.1128/MCB.21.4.1429-1439.2001 Weiner, 1980, An abundant cytoplasmic 7S RNA is complementary to the dominant interspersed middle repetitive DNA sequence family in the human genome, Cell, 22, 209, 10.1016/0092-8674(80)90169-5 Weiner, 2000, Do all SINEs lead to SINEs, Nat. Genet., 24, 332, 10.1038/74135