Usage of electrostatic eliminator reduces human keratin contamination significantly in gel-based proteomics analysis

Journal of Proteomics - Tập 74 - Trang 1022-1029 - 2011
Bo Xu1, Ying Zhang1, Zongjiang Zhao1, Yutaka Yoshida1, Sameh Magdeldin1,2, Hidehiko Fujinaka1,3, Tamer Ahmed Ismail1,4, Eishin Yaoita1, Tadashi Yamamoto1
1Department of Structural Pathology, Institute of Nephrology, Graduate School of Medical and Dental Sciences, Niigata University, Niigata, Japan
2Department of Physiology, Faculty of Veterinary Medicine, Suez Canal University, Egypt
3Institute of clinical Research, Niigata National Hospital, Kashiwazaki, Japan
4Department of Physiology, Faculty of Veterinary Medicine, Zagazig University, Egypt

Tài liệu tham khảo

Capelo, 2009, Overview on modern approaches to speed up protein identification workflows relying on enzymatic cleavage and mass spectrometry-based techniques, Anal Chim Acta, 650, 151, 10.1016/j.aca.2009.07.034 Granvogl, 2007, Sample preparation by in-gel digestion for mass spectrometry-based proteomics, Anal Bioanal Chem, 389, 991, 10.1007/s00216-007-1451-4 Ding, 2003, Unmatched masses in peptide mass fingerprints caused by cross-contamination: an updated statistical result, Proteomics, 3, 1313, 10.1002/pmic.200300452 Thurgood, 2010, Proteomic analysis of proteins selectively associated with hydroxyapatite, brushite, and uric acid crystals precipitated from human urine, J Proteome Res, 9, 5402, 10.1021/pr1006312 Stamenkovic, 1986, Distribution of intermediate filament proteins in normal and diseased human glomeruli, Am J Pathol, 125, 465 Fleming, 1987, The distribution of cytokeratin antigens in the kidney and in renal tumours, Histopathology, 11, 157, 10.1111/j.1365-2559.1987.tb02619.x Tsugita, 2000, Proteome analysis of mouse brain: two-dimensional electrophoresis profiles of tissue proteins during the course of aging, Electrophoresis, 21, 1853, 10.1002/(SICI)1522-2683(20000501)21:9<1853::AID-ELPS1853>3.0.CO;2-Y Zhang, 2010, Glomerular proteins related to slit diaphragm and matrix adhesion in the foot processes are highly tyrosine phosphorylated in the normal rat kidney, Nephrol Dial Transplant, 25, 1785, 10.1093/ndt/gfp697 Xu, 2005, Two-dimensional electrophoretic profiling of normal human kidney: differential protein expression in glomerulus, cortex and medulla, J Electrophoresis, 49, 5, 10.2198/jelectroph.49.5 Jin, 2008, Analysis of expression and comparative profile of normal placental tissue proteins and those in preeclampsia patients using proteomic approaches, Anal Chim Acta, 629, 158, 10.1016/j.aca.2008.09.015 Griffin, 2010, Label-free, normalized quantification of complex mass spectrometry data for proteomic analysis, Nat Biotechnol, 28, 83, 10.1038/nbt.1592 Alvarado, 2010, A comparative study of in-gel digestions using microwave and pressure-accelerated technologies, J Biomol Tech, 21, 148