Unraveling the mystery of subsurface microorganisms in bioremediation

Current Research in Biotechnology - Tập 4 - Trang 302-308 - 2022
Gurpreet Kaur1, Guneet Kaur1, Magdalena Krol1, Satinder Kaur Brar1
1Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario, M3J 1P3, Canada

Tài liệu tham khảo

Afrooz, 2018, Role of microbial cell properties on bacterial pathogen and coliphage removal in biochar-modified stormwater biofilters, Environ. Sci. Water Res. Technol., 4, 2160, 10.1039/C8EW00297E Amend, 2005, Expanding frontiers in deep subsurface microbiology, Geobiol.: Object. Concepts Perspect., 219, 131 Anderson, 2011, Is the genetic landscape of the deep subsurface biosphere affected by viruses?, Front. Microbiol., 2, 219, 10.3389/fmicb.2011.00219 Aulenta, 2021, An underappreciated DIET for anaerobic petroleum hydrocarbon-degrading microbial communities, Microb. Biotechnol., 14, 2, 10.1111/1751-7915.13654 Canadell, 2021, Global carbon and other biogeochemical cycles and feedbacks, Clim. Change Carini, 2019, A “cultural” renaissance: genomics breathes new life into an old craft, MSystems, 4, e00092, 10.1128/mSystems.00092-19 Falkowski, 2008, The microbial engines that drive earth’s biogeochemical cycles, Science, 320, 1034, 10.1126/science.1153213 Ginn, 2002, Processes in microbial transport in the natural subsurface, Adv. Water Resour., 25, 1017, 10.1016/S0309-1708(02)00046-5 Gou, 2020, Enhanced degradation of polycyclic aromatic hydrocarbons in aged subsurface soil using integrated persulfate oxidation and anoxic biodegradation, Chem. Eng. J., 394, 10.1016/j.cej.2020.125040 Griebler, 2009, Microbial biodiversity in groundwater ecosystems, Freshw. Biol., 54, 649, 10.1111/j.1365-2427.2008.02013.x Hazen, T. C. (2018). Bioremediation. In The Microbiology of the Terrestrial Deep Subsurface (pp. 247–266). CRC Press. Hollander, A.K., 2018. Environmental impacts of genetically engineered microbial and viral biocontrol agents. In: Biotechnology for biological control of pests and vectors (pp. 251–266). CRC Press. Hug, 2016, A new view of the tree of life, Nat. Microbiol., 1, 1, 10.1038/nmicrobiol.2016.48 Kadnikov, 2020, Microbial life in the deep subsurface aquifer illuminated by metagenomics, Front. Microbiol., 11, 2146, 10.3389/fmicb.2020.572252 Kumar Gupta, 2020, Fate, transport, and bioremediation of biodiesel and blended biodiesel in subsurface environment: a review, J. Environ. Eng., 146, 03119001, 10.1061/(ASCE)EE.1943-7870.0001619 Ławniczak, 2020, Microbial degradation of hydrocarbons—basic principles for bioremediation: a review, Molecules, 25, 856, 10.3390/molecules25040856 Leung, K.T., Jiang, Z.-H., Almzene, N., Nandakumar, K., Sreekumari, K., Trevors, J.T., 2019. Biodegradation and bioremediation of organic pollutants in soil. Modern Soil Microbiol. 381–402. Long, 2016, Microbial metagenomics reveals climate-relevant subsurface biogeochemical processes, Trends Microbiol., 24, 600, 10.1016/j.tim.2016.04.006 Matsushita, 2020, The potential for CH4 production by syntrophic microbial communities in diverse deep aquifers associated with an accretionary prism and its overlying sedimentary layers, Microb. Environ., 35, ME19103, 10.1264/jsme2.ME19103 Meckenstock, 2015, Biodegradation: Updating the concepts of control for microbial cleanup in contaminated aquifers, Environ. Sci. Technol., 49, 7073, 10.1021/acs.est.5b00715 Meyer, 2022, From Surface to Subsurface: Diversity, Composition, and Abundance of Sessile and Endolithic Bacterial, Archaeal, and Eukaryotic Communities in Sand, Clay and Rock Substrates in the Laurentians (Quebec, Canada), Microorganisms, 10, 129, 10.3390/microorganisms10010129 Mishra, 2022, Biofilm-mediated bioremediation is a powerful tool for the removal of environmental pollutants, Chemosphere, 294, 10.1016/j.chemosphere.2022.133609 Molnar, 2019, Colloid transport in porous media: a review of classical mechanisms and emerging topics, Transp. Porous Media, 130, 129, 10.1007/s11242-019-01270-6 Oudega, 2021, Upscaling transport of bacillus subtilis endospores and coliphage phiX174 in heterogeneous porous media from the column to the field scale, Environ. Sci. Technol., 55, 11060, 10.1021/acs.est.1c01892 Qiao, 2019, Microbial communities associated with sustained anaerobic reductive dechlorination of α-, β-, γ-, and δ-hexachlorocyclohexane isomers to monochlorobenzene and benzene, Environ. Sci. Technol., 54, 255, 10.1021/acs.est.9b05558 Quintella, 2019, Overview of bioremediation with technology assessment and emphasis on fungal bioremediation of oil contaminated soils, J. Environ. Manage., 241, 156, 10.1016/j.jenvman.2019.04.019 Tran, 2021, Biogeochemistry goes viral: towards a multifaceted approach to study viruses and biogeochemical cycling, Msystems, 6, e01138, 10.1128/mSystems.01138-21 Tyagi, 2011, Bioaugmentation and biostimulation strategies to improve the effectiveness of bioremediation processes, Biodegradation, 22, 231, 10.1007/s10532-010-9394-4 Witthayaphirom, 2020, Organic micro-pollutant removals from landfill leachate in horizontal subsurface flow constructed wetland operated in the tropical climate, J. Water Process Eng., 38, 10.1016/j.jwpe.2020.101581 Zhou, 2022, METABOLIC: high-throughput profiling of microbial genomes for functional traits, metabolism, biogeochemistry, and community-scale functional networks, Microbiome, 10, 1, 10.1186/s40168-021-01213-8