Trypsin Cleaves Exclusively C-terminal to Arginine and Lysine Residues

Aebersold, 2003, Mass spectrometry-based proteomics., Nature, 422, 198, 10.1038/nature01511

Baldwin, 2004, Protein identification by mass spectrometry: Issues to be considered., Mol. Cell. Proteomics, 3, 1, 10.1074/mcp.R300012-MCP200

Keller, 2002, Experimental protein mixture for validating tandem mass spectral analysis., Omics, 6, 207, 10.1089/153623102760092805

Shevchenko, 2001, Charting the proteomes of organisms with unsequenced genomes by MALDI-quadrupole time-of-flight mass spectrometry and BLAST homology searching., Anal. Chem., 73, 1917, 10.1021/ac0013709

Peng, 2003, Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: The yeast proteome., J. Proteome Res., 2, 43, 10.1021/pr025556v

Nesvizhskii, 2003, A statistical model for identifying proteins by tandem mass spectrometry., Anal. Chem., 75, 4646, 10.1021/ac0341261

Anderson, 2003, A new algorithm for the evaluation of shotgun peptide sequencing in proteomics: Support vector machine classification of peptide MS/MS spectra and SEQUEST scores., J. Proteome Res., 2, 137, 10.1021/pr0255654

Mann, 1994, Error-tolerant identification of peptides in sequence databases by peptide sequence tags., Anal. Chem., 66, 4390, 10.1021/ac00096a002

Syka, 2004, Novel linear quadrupole ion trap/FT mass spectrometer: Performance characterization and use in the comparative analysis of histone H3 post-translational modifications., J. Proteome Res., 10.1021/pr0499794

Wilm, 1996, Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry., Nature, 379, 466, 10.1038/379466a0

Rappsilber, 2003, Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics., Anal. Chem., 75, 663, 10.1021/ac026117i

Marshall, 1998, Fourier transform ion cyclotron resonance mass spectrometry: A primer., Mass Spectrom. Rev., 17, 1, 10.1002/(SICI)1098-2787(1998)17:1<1::AID-MAS1>3.0.CO;2-K

Belov, 2003, Automated gain control and internal calibration with external ion accumulation capillary liquid chromatography-electrospray ionization Fourier transform ion cyclotron resonance., Anal. Chem., 75, 4195, 10.1021/ac0206770

Perkins, 1999, Probability-based protein identification by searching sequence databases using mass spectrometry data., Electrophoresis, 20, 3551, 10.1002/(SICI)1522-2683(19991201)20:18<3551::AID-ELPS3551>3.0.CO;2-2

Creasy, 2002, Error tolerant searching of uninterpreted tandem mass spectrometry data., Proteomics, 2, 1426, 10.1002/1615-9861(200210)2:10<1426::AID-PROT1426>3.0.CO;2-5

Han, 1983, Current developments in chemical cleavage of proteins., Int. J. Biochem., 15, 875, 10.1016/0020-711X(83)90162-3

Hunt, 1986, Protein sequencing by tandem mass spectrometry., Proc. Natl. Acad. Sci. U. S. A., 83, 6233, 10.1073/pnas.83.17.6233

Jensen, 1996, Delayed extraction improves specificity in database searches by matrix-assisted laser desorption/ionization peptide maps., Rapid Commun. Mass Spectrom., 10, 1371, 10.1002/(SICI)1097-0231(199608)10:11<1371::AID-RCM682>3.0.CO;2-5

Clauser, 1999, Role of accurate mass measurement (+/- 10 ppm) in protein identification strategies employing MS or MS/MS and database searching., Anal. Chem., 71, 2871, 10.1021/ac9810516

Andersen, 2003, Proteomic characterization of the human centrosome by protein correlation profiling., Nature, 426, 570, 10.1038/nature02166

Parker, 2003