Transcriptome profiling of the spl5 mutant reveals that SPL5 has a negative role in the biosynthesis of serotonin for rice disease resistance

Andi S, Taguchi F, Toyoda K, Shiraishi T, Ichinose Y (2001) Effect of methyl jasmonate on harpin-induced hypersensitive cell death, generation of hydrogen peroxide and expression of PAL mRNA in tobacco suspension cultured BY-2 cells. Plant Cell Physiol 42:446–449 Badigannavar AM, Kale DM, Eapen S, Murty GSS (2002) Inheritance of disease lesion mimic leaf trait in groundnut. J Hered 93:50–52 Berri S, Abbruscato P, Faivre-Rampant O, Brasileiro AC, Fumasoni I, Satoh K, Kikuchi S, Mizzi L, Morandini P, Pè ME, Piffanelli P (2009) Characterization of WRKY co-regulatory networks in rice and Arabidopsis. BMC Plant Biol 9:120 Brosi R, Groning K, Behrens SE, Luhrmann R, Kramer A (1993) Interaction of mammalian splicing factor SF3a with U2 snRNP and relation of its 60-kD subunit to yeast PRP9. Science 262:102–105 Chen X, Hao L, Pan J, Zheng X, Jiang G, Jin Y, Gu Z, Qian Q, Zhai W, Ma B (2012) SPL5, a cell death and defense-related gene, encodes a putative splicing factor 3b subunit 3 (SF3b3) in rice. Mol Breeding 30:939–949 Chen X, Fu S, Zhang P, Gu Z, Liu J, Qian Q, Ma B (2013) Proteomic analysis of a disease-resistance-enhanced lesion mimic mutant spotted leaf 5 in rice. Rice 6:1 Chern M, Fitzgerald HA, Canlas PE, Navarre DA, Ronald PC (2005) Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light. Mol Plant Microbe Interact 18:511–520 Choi HW, Kim YJ, Hwang BK (2011) The hypersensitive induced reaction and leucine-rich repeat proteins regulate plant cell death associated with disease and plant immunity. Am Phytopathol Soc 24:68–78 Das BK, Xia L, Palandjian L, Gozani O, Chyung Y, Reed R (1999) Characterization of a protein complex containing spliceosomal proteins SAPs 49, 130, 145, and 155. Mol Cell Biol 19:6796–6802 Durrant WE, Dong X (2004) Systemic acquired resistance. Annu Rev Phytopathol 42:185–209 Elaine R, Radwanski L, Robert L (1995) Tryptophan biosynthesis and metabolism: biochemical and molecular genetics. Plant Cell 7:921–934 Fujiwara T, Maisonneuve S, Isshiki M, Mizutani M, Chen L, Wong HL, Kawasaki T, Shimamoto K (2010) Sekiguchi lesiongene encodes a cytochrome P450 monooxygenase that catalyzes conversion of tryptamine to serotonin in rice. J Biol Chem 285:11308–11313 Hu XB, Zhang HJ, Li GJ, Yang YX, Zheng Z, Song FM (2009) Ectopic expression of a rice protein phosphatase 2C gene OsBIPP2C2 in tobacco improves disease resistance. Plant Cell 28:985–995 Huang QN, Yang Y, Shi YF, Chen J, Wu JL (2010) Recent advances in research on spotted-leaf mutants of rice (Oryza sativa). Rice 24:108–115 Hwang DH, Kim ST, Kim SG, Kang KY (2007) Comprehensive analysis of the expression of twenty-seven β-1, 3-glucanase genes in rice (Oryza sativa L.). Mol Cells 23:207–214 Ishihara A, Hashimoto Y, Tanaka C, Dubouzet JG, Nakao T, Matsuda F, Nishioka T, Miyagawa H, Wakasa K (2008) The tryptophan pathway is involved in the defense responses of rice against pathogenic infection via serotonin production. Plant J 54:481–495 Ishihara A, Nakao T, Mashimo Y, Murai M, Ichimaru N, Tanaka C, Nakajima H, Wakasa K, Miyagawa H (2011) Probing the role of tryptophan-derived secondary metabolism in defense responses against Bipolaris oryzae infection in rice leaves by a suicide substrate of tryptophan decarboxylase. Phytochemistry 72:7–13 Iwata N, Omura T, Satoh H (1978) Linkage studies in rice (Oryza sativa L.) on some mutants for physiological leaf spots. J Fac Agr Kyushu Univ 22:243–251 Jerwin R, Muluneh T, Akira A, Kentaro Y, Shunichi K, Hiroki T, Kakoto Y, Hiroyuki K, Hiromasa S, Rym F, Shailendra S, Jesusa U, Masahiro Y, Ryohei T (2012) Mutation in OsLMS, a gene encoding a protein with two double-stranded RNA binding motifs, causes lesion mimic phenotype and early senescence in rice (Oryza sativa L.). Genes Genet 87:169–179 Johal GS, Hulbert S, Briggs SP (1995) Disease lesion mimics of maize: a model for cell death in plants. Bio Essays 17:685–692 Jung YH, Lee JH, Agrawal GK, Rakwal R, Kim JA, Shim JK, Lee SK, Jeon JS, Koh HJ, Lee YH, Iwahashi H, Jwa NS (2005) The rice (oryza sativa) blast lesion mimic mutant, blm, may confer resistance to blast pathogens by triggering multiple defense-associated signaling pathways. Plant Physiol Biochem 43:397–406 Kang K, Kim YS, Park S, Back K (2009) Senescence-induced serotonin biosynthesis and its role in delaying senescence in rice leaves. Plant Physiol 150:1380–1393 Kang K, Park S, Natsagdorj U, Kim YS, Back K (2011) Methanol is an endogenous elicitor molecule for the synthesis of tryptophan and tryptophan-derived secondary metabolites upon senescence of detached rice leaves. Plant J 66:247–257 Kim JA, Cho K, Singh R, Jung YH, Jeong SH, Kim SH, Lee JE, Cho YS, Agrawal GK, Rakwal R, Tamogami S, Kersten B, Jeon JS, An G, Jwa NS (2009) Rice OsACDR1 (Oryza sativa accelerated cell death and resistance 1 is a potential positive regulator of fungal disease resistance. Mol Cells 28:431–439 Kim SH, Song M, Lee KJ, Hwang SG, Jang CS, Kim JB, Kim SH, Ha BK, Kang SY, Kim DS (2012) Genome-wide transcriptome profiling of ROS scavenging and signal transduction pathways in rice (Oryza sativa L.) in response to different types of ionizing radiation. Mol Biol Rep 39:11231–11248 Lee SC, Kang BG, Oh SE (1999) Induction of ascorbate peroxidase isoenzymes by ethylene and hydrogen peroxide during growth of cultured soybean cells. Mol Cells 9:166–171 Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔ C T Method. Methods 25:402–408 Lorrain S, Vailleau F, Balague C, Roby D (2003) Lesion mimic mutants: keys for deciphering cell death and defense pathways in plants. Trends Plant Sci 8:263–271 Mizobuchi R, Hirabayashi H, Kaji R, Nishizawa Y, Yoshimura A, Satoh H, Ogawa T, Okamoto M (2002) Isolation and characterization of rice lesion mimic mutants with enhanced resistance to rice blast and bacterial blight. Plant Sci 163:345–353 Moeder W, Yoshioka K (2008) Lesion mimic mutants: A classical, yet still fundamental approach to study programmed cell death. Plant Signal Behav 3(10):764–767 Morel JB, Dangl JL (1997) The hypersensitive response and the induction of cell death in plants. Cell Death Differ 4:671–683 Mori M, Tomita C, Sugimoto K, Hasegawa M, Hayashi N, Dubouzet JG, Ochiai H, Sekimoto H, Hirochika H, Kikuchi S (2007) Isolation and molecular characterization of a Spotted leaf 18 mutant by modified activation-tagging in rice. Plant Mol Biol 63:847–860 Murch SJ, Campbell SSB, Saxena P (2001) The role of serotonin and melatonin in plant morphogenesis: regulation of auxin-induced root organogenesis in in vitro-cultured explants of St. John’s wort (Hypericum perforatum L.). Cell Dev Biol Plant 37:786–793 Nair SK, Tomar SMS (2001) Genetical and anatomical analyses of a leaf flecking mutant in wheat. Euphytica 121:53–58 Pelagio-Flores R, Ortız-Castro R, Mendez-Bravo A, Macıas-Rodrıguez L, Lopez-Bucio J (2011) Serotonin, a tryptophan-derived signal conserved in plants and animals, regulates root system architecture probably acting as a natural auxin inhibitor in Arabidopsis thaliana. Plant Cell Physiol 52(3):490–508 Qiao Y, Jiang W, Lee J, Park B, Choi MS, Piao R, Woo MO, Roh JH, Han L, Paek NC, Seo HS, Koh HJ (2010) SPL28 encodes a clathrin-associated adaptor protein complex 1, medium subunit micro 1 (AP1M1) and is responsible for spotted leaf and early senescence in rice (oryza sativa). New Phytol 185:258–274 Sela-Buurlage MB, Ponstein AS, Bres-Vloemans SA, Melchers LS, van den Elzen PJM, Comelissen BJC (1993) Only specific tobacco (nicotiana tabacum) chitinases and [beta]-1,3-glucanase exhibit antifungal activity. Plant Physiol 101:857–863 Shen X, Liu H, Yuan B, Li X, Xu C, Wang S (2011) OsEDR1 negatively regulates rice bacterial resistance via activation of ethylene biosynthesis. Plant Cell Environ 34:179–191 Staskawicz BJ, Ausubel FM, Baker BJ, Ellis JG, Jones JD (1995) Molecular genetics of plant disease resistance. Science 268:661–667 Sun C, Liu L, Tang J, Lin A, Zhang F, Fang J, Zhang G, Chu C (2011) RLIN1, encoding a putative coproporphyrinogen III oxidase, is involved in lesion initiation in rice. J Genet Genomics 38:29–37 Takahashi A, Kawasaki T, Henmi K, Shii K, Kodama O, Satoh H, Shimamoto K (1999) Lesion mimic mutants of rice with alterations in early signaling events of defense. Plant J 17:535–5453 Takahashi A, Agrawal GK, Yamazaki M, Onosato K, Miyao A, Kawasaki T, Shimamoto K, Hirochika H (2007) Rice Pti1a negatively regulates RAR1-dependent defense responses. Plant Cell 19:2940–2951 Wang L, Pei Z, Tian Y, He C (2005) OsLSD1, a rice zinc finger protein, regulates programmed cell death and callus differentiation. Mol Plant Microbe Interact 18:375–384 Wang XL, Tang X, Liu ZY (2012) Construction of OsWRKY17 specific expression vector in rice. J Age Sci Tech-Iran 13:79–81 Wolter M, Hollricher K, Salaminip F, Schulze-Lefert P (1993) The mlo resistance alleles to powdery mildew infection in barley trigger a developmentally controlled defense mimic phenotype. Mol Gen Genet 239:122–128 Wu C, Bordeos A, Madamba MR, Baraoidan M, Ramos M, Wang GL, Leach JE, Leung H (2008) Rice lesion mimic mutants with enhanced resistance to diseases. Mol Genet Genomics 279:605–619 Yamanouchi U, Yano M, Lin H, Ashikari M, Yamada K (2002) A rice spotted leaf gene, Spl7, encodes a heat stress transcription factor protein. Proc Natl Acad Sci U S A 99:7530–7535 Yang WY (2007) Separation of rice OsWRKY14 and preliminary analysis of gene function. Dissertation, China Agricultural University Yin Z, Chen J, Zeng L, Goh M, Leung H, Khush GS, Wang GL (2000) Characterizing rice lesion mimic mutants and identifying a mutant with broad-spectrum resistance to rice blast and bacterial blight. Mol Plant Microbe Interact 13:869–876 Yoshida S, Forno DA, Cook JH, Gomes KA (1976) Routine procedure for growing rice plants in culture solution. IRRI Laboratory manual for physiological studies of rice, Los Banos, Philippines Zeng L, Qu S, Bordeos A, Yang C, Baraoidan M, Yan H, Xie Q, Nahm BH, Leung H, Wang G (2004) Spotted leaf 11, a negative regulator of plant cell death and defense, encodes a U-box/armadillo repeat protein endowed with E3 ubiquitin ligase activity. Plant Cell 16:2795–2808 Zhang J, Peng YL, Guo ZJ (2008) Constitutive expression of pathogen-inducible OsWRKY31 enhances disease resistance and affects root growth and auxin response in transgenic rice plants. Cell Res 18:508–521