Transcriptome assemblies of two deep-sea octocorals Calyptrophora lyra and Chrysogorgia stellata from West Pacific seamount, Godin Guyot

Altschul, 1990, Basic local alignment search tool, J. Mol. Biol., 215, 403, 10.1016/S0022-2836(05)80360-2 Bolger, 2014, Trimmomatic: a flexible trimmer for Illumina sequence data, Bioinformatics, 30, 2114, 10.1093/bioinformatics/btu170 Buchfink, 2015, Fast and sensitive protein alignment using DIAMOND, Nat. Methods, 12, 59, 10.1038/nmeth.3176 Cairns, 2018, Primnoidae (Cnidaria: Octocorallia: Calcaxonia) of the Okeanos explorer expeditions (CAPSTONE) to the Central Pacific, Zootaxa, 4532, 1, 10.11646/zootaxa.4532.1.1 Cairns, 2009, A generic revision and phylogenetic analysis of the Primnoidae (Cnidaria: Octocorallia), Smithson. Contrib. Zool., 629, 1, 10.5479/si.00810282.629 Clark, 2010, The ecology of seamounts: structure, function, and human impacts, Annu. Rev. Mar. Sci., 2, 253, 10.1146/annurev-marine-120308-081109 Emms, 2019, OrthoFinder: phylogenetic orthology inference for comparative genomics, Genome Biol., 20, 238, 10.1186/s13059-019-1832-y Grabherr, 2011, Trinity: reconstructing a full-length transcriptome without a genome from RNA-Seq data, Nat. Biotechnol., 29, 644, 10.1038/nbt.1883 Haas, 2013, De novo transcript sequence reconstruction from RNA-seq using the trinity platform for reference generation and analysis, Nat. Protoc., 8, 1494, 10.1038/nprot.2013.084 Kitchingman, 2007, How many seamounts are there and where are they located?, 26 Li, 2006, Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences, Bioinformatics, 22, 1658, 10.1093/bioinformatics/btl158 Morato, 2010, Seamounts are hotspots of pelagic biodiversity in the open ocean, Proc. Natl. Acad. Sci. U. S. A., 107, 9707, 10.1073/pnas.0910290107 Morgan, 2015, Benthic megafaunal community structure of cobalt-rich manganese crusts on Necker ridge, Deep Sea Res. Part I Oceanogr. Res. Pap., 104, 92, 10.1016/j.dsr.2015.07.003 Nutting, 1908, Descriptions of the Alcyonaria collected by the US Bureau of fisheries steamer albatross in the vicinity of the Hawaiian islands in 1902, Proc. U. S. Natl. Mus., 34, 543, 10.5479/si.00963801.34-1624.543 Pante, 2012, Deep-sea origin and in-situ diversification of chrysogorgiid octocorals, PLoS One, 7, 10.1371/journal.pone.0038357 Rogers, 2018, The biology of seamounts: 25 years on, Adv. Mar. Biol., 79, 137, 10.1016/bs.amb.2018.06.001 Rogers, 2007, Corals on seamounts, 3343 Shen, 2021, Community structure of benthic megafauna on a seamount with cobalt-rich ferromanganese crusts in the northwestern Pacific Ocean, Deep Sea Res. Part I Oceanogr. Res. Pap., 178, 10.1016/j.dsr.2021.103661 Tamura, 2021, MEGA11: molecular evolutionary genetics analysis version 11, Mol. Biol. Evol., 38, 3022, 10.1093/molbev/msab120 Waterhouse, 2017, BUSCO applications from quality assessments to gene prediction and phylogenomics, Mol. Biol. Evol., 35, 543, 10.1093/molbev/msx319 Watling, 2007, A review of the genus Iridogorgia (Octocorallia: Chrysogorgiidae) and its relatives, chiefly from the North Atlantic Ocean, J. Mar. Biol. Assoc. UK, 87, 393, 10.1017/S002531540705535X Xu, 2020, Morphology and phylogenetic analysis of five deep-sea golden gorgonians (Cnidaria, Octocorallia, Chrysogorgiidae) in the Western Pacific Ocean, with the description of a new species, ZooKeys, 989, 1, 10.3897/zookeys.989.53104