Transcriptome analysis reveals key transcription factors and pathways of polian vesicle associated with cell proliferation in Vibrio splendidus-challenged Apostichopus japonicus

Adcock, 1997, Transcription factors as activators of gene transcription: AP-1 and NF-kappa B, Monaldi Arch. Chest Dis., 52, 178 Baccetti, 1968, The fine structure of the polian vesicles of holothurians, Z. Zellforsch. Mikrosk. Anat., 90, 148, 10.1007/BF00496708 Chen, 2019, CDK14 involvement in proliferation migration and invasion of esophageal cancer, Ann. Transl. Med., 7, 681, 10.21037/atm.2019.11.105 Close, 2002, Expression of the zinc finger Egr1 gene during zebrafish embryonic development, Mech. Dev., 118, 269, 10.1016/S0925-4773(02)00283-6 Conand, 2017, Expansion of global sea cucumber fisheries buoys exports, Rev. Biol. Trop., 65, 1, 10.15517/rbt.v65i1-1.31661 Cuenot,n.d., L. Cuenot , Tudes sur le sang et les glandes lymphatiques dans la série animale (2 partie: Invertebres). Arch. Zool. Exp. Gen. 9, 593–670. n.d. D'Ancona, 1989, Engagement of Polian vesicles during Holothuria polii response to erythrocyte injection, J. Invertebr. Pathol., 54, 300, 10.1016/0022-2011(89)90113-4 Ezhova, 2016, Ultrastructural evidence of the excretory function in the asteroid axial organ (Asteroidea, Echinodermata), Dokl. Biol. Sci., 468, 129, 10.1134/S0012496616030091 Foletta, 1998, Transcriptional regulation in the immune system: all roads lead to AP-1, J. Leukoc. Biol., 63, 139, 10.1002/jlb.63.2.139 Franceschini, 2013, STRING v9.1: protein-protein interaction networks, with increased coverage and integration, Nucleic Acids Res., 41, 808, 10.1093/nar/gks1094 Guo, 2021, Transcriptome analysis reveals roles of polian vesicle in sea cucumber Apostichopus japonicus response to Vibrio splendidus infection, Comp. Biochem. Physiol. D: Genomics Proteomics, 40 Han, 2020, Notch3 is involved in the proliferation of renal cancer cells via regulation of cell cycle progression and HIF2α, Oncol. Lett., 20, 10.3892/ol.2020.12242 Holm, 2008, Induced cell proliferation in putative haematopoietic tissues of the sea star, Asterias rubens (L.), J. Exp. Biol., 211, 2551, 10.1242/jeb.018507 Hua, 2009, Phagocytosis and agglutination of coelomocytes in sea cucumber Apostichopus japonicus with relation to water temperature, J. Dalian Fish Univ. (Chinese), 24, 189 Huang, 2017, Mitogen-activated protein kinase 7 promotes cell proliferation, migration and invasion in SOSP-M human osteosarcoma cell line, Tumori, 103, 483, 10.5301/tj.5000399 Jemaà, 2014, Adult somatic progenitor cells and hematopoiesis in oysters, J. Exp. Biol., 217, 3067 Johnson, 1997, K-ras is an essential gene in the mouse with partial functional overlap with N-ras, Genes Dev., 11, 2468, 10.1101/gad.11.19.2468 Kang, 1996, Ras protein and signal transduction, Chin. Bull. Life Sci., 8, 24 Karin, 2001, AP-1: linking hydrogen peroxide and oxidative stress to the control of cell proliferation and death, IUBMB Life, 52, 17, 10.1080/15216540252774711 Kimpara, 2021, EGR1 addiction in diffuse large B-cell lymphoma, Mol. Cancer Res., 19, 1258, 10.1158/1541-7786.MCR-21-0267 Kozian, 1997, Transcriptional regulation of the ras-related protein TC21/R-Ras2 in endothelial cells, FEBS Lett., 414, 239, 10.1016/S0014-5793(97)01038-7 Li, 2015, Shikonin suppresses skin carcinogenesis via inhibiting cell proliferation, Plos One, 10 Li, 2019, Localization and characterization of hematopoietic tissues in adult sea cucumber, Apostichopus japonicus, Fish Shellfish Immunol., 84, 1, 10.1016/j.fsi.2018.09.058 Lin, 2011, Crustacean hematopoiesis and the astakine cytokines, Blood, 117, 6417, 10.1182/blood-2010-11-320614 Lin, 2010, Kruppel-like factor 2 regulates endothelial barrier function, Arterioscler. Thromb. Vasc. Biol., 30, 1952, 10.1161/ATVBAHA.110.211474 Livak, 2002, Analysis of relative gene expression data using real-time quantitative PCR, Methods, 25, 402, 10.1006/meth.2001.1262 Mitsuma, 2005, Transcriptional regulation of FKLF-2 (KLF13) gene in erythroid cells, Biochim. Biophys. Acta, 1727, 125, 10.1016/j.bbaexp.2004.12.007 Parrales, 2010, Thrombin stimulates RPE cell proliferation by promoting c-fos-mediated cyclin D1 expression, J. Cell. Physiol., 222, 302, 10.1002/jcp.21951 Ryckaert, 2010, Heat shock proteins protect platyfish (Xiphophorus maculatus) from Yersinia ruckeri induced mortality, Fish Shellfish Immunol., 28, 228, 10.1016/j.fsi.2009.09.005 Shannon, 2003, Cytoscape: a software environment for integrated models of biomolecular interaction networks, Genome Res., 13, 2498, 10.1101/gr.1239303 Shaulian, 2002, AP-1 as a regulator of cell life and death, Nat. Cell Biol., 4, 131, 10.1038/ncb0502-e131 Shi, 2020, Transcriptome analysis of sea cucumber (Apostichopus japonicus) polian vesicles in response to evisceration, Fish Shellfish Immunol., 97, 108, 10.1016/j.fsi.2019.12.016 Song, 2019, The axial organ and the pharynx are sites of hematopoiesis in the sea urchin, Front. Immunol., 10, 870, 10.3389/fimmu.2019.00870 Taguchi, 2016, Differential count and time-course analysis of the cellular composition of coelomocyte aggregate of the japanese sea cucumber Apostichopus japonicus, Fish Shellfish Immunol., 58, 203, 10.1016/j.fsi.2016.06.060 Wang, 1991, A novel target cell for c-fos-induced oncogenesis: development of chondrogenic tumours in embryonic stem cell chimeras, EMBO J., 10, 2437, 10.1002/j.1460-2075.1991.tb07783.x Wang, 2022, Transcriptome analysis reveals the molecular response to salinity challenge in larvae of the Giant freshwater prawn Macrobrachium rosenbergii, Front. Physiol., 13 Wang, 2023, Comparative analysis for immune response of coelomic fluid from coelom and polian vesicle in Apostichopus japonicus to Vibrio splendidus infection, Fish Shellfish Immunol. Rep., 4 Xiong, 2015, Notch signaling pathway and its role in ovarian cancer cells, Chin. J. Woman Child Health Res., 26, 3 Zhang, 2017, Transcription factor EGR1 promotes differentiation of bovine skeletal muscle satellite cells by regulating MyoG gene expression, J. Cell. Physiol., 233, 350, 10.1002/jcp.25883 Zhang, 2020, The MAP3K13-TRIM25-FBXW7α axis affects c-myc protein stability and tumor development, Cell Death Differ., 27, 420, 10.1038/s41418-019-0363-0