Transcriptional Profiling of the Human Monocyte-to-Macrophage Differentiation and Polarization: New Molecules and Patterns of Gene Expression

Journal of Immunology - Tập 177 Số 10 - Trang 7303-7311 - 2006
Fernando O. Martínez1,2, Siamon Gordon3, Massimo Locati1,2, Alberto Mantovani1,2
1Istituto Clinico Humanitas, Rozzano, Italy
2†Institute of General Pathology, University of Milan, Milan, Italy; and
3Sir William Dunn School of Pathology, University of Oxford, Oxford, United Kingdom

Tóm tắt

Abstract

Comprehensive analysis of the gene expression profiles associated with human monocyte-to-macrophage differentiation and polarization toward M1 or M2 phenotypes led to the following main results: 1) M-CSF-driven monocyte-to-macrophage differentiation is associated with activation of cell cycle genes, substantiating the underestimated proliferation potential of monocytes. 2) M-CSF leads to expression of a substantial part of the M2 transcriptome, suggesting that under homeostatic conditions a default shift toward M2 occurs. 3) Modulation of genes involved in metabolic activities is a prominent feature of macrophage differentiation and polarization. 4) Lipid metabolism is a main category of modulated transcripts, with expected up-regulation of cyclo-oxygenase 2 in M1 cells and unexpected cyclo-oxygenase 1 up-regulation in M2 cells. 5) Each step is characterized by a different repertoire of G protein-coupled receptors, with five nucleotide receptors as novel M2-associated genes. 6) The chemokinome of polarized macrophages is profoundly diverse and new differentially expressed chemokines are reported. Thus, transcriptome profiling reveals novel molecules and signatures associated with human monocyte-to-macrophage differentiation and polarized activation which may represent candidate targets in pathophysiology.

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Tài liệu tham khảo

Grage-Griebenow, E., H. D. Flad, M. Ernst. 2001. Heterogeneity of human peripheral blood monocyte subsets. J. Leukocyte Biol. 69: 11-20.

Hume, D. A., I. L. Ross, S. R. Himes, R. T. Sasmono, C. A. Wells, T. Ravasi. 2002. The mononuclear phagocyte system revisited. J. Leukocyte Biol. 72: 621-627.

Gordon, S.. 2003. Alternative activation of macrophages. Nat. Rev. Immunol. 3: 23-35.

Mantovani, A., A. Sica, S. Sozzani, P. Allavena, A. Vecchi, M. Locati. 2004. The chemokine system in diverse forms of macrophage activation and polarization. Trends Immunol. 25: 677-686.

Mantovani, A., A. Sica, M. Locati. 2005. Macrophage polarization comes of age. Immunity 23: 344-346.

Goerdt, S., C. E. Orfanos. 1999. Other functions, other genes: alternative activation of antigen-presenting cells. Immunity 10: 137-142.

Dalton, D. K., S. Pitts-Meek, S. Keshav, I. S. Figari, A. Bradley, T. A. Stewart. 1993. Multiple defects of immune cell function in mice with disrupted interferon-γ genes. Science 259: 1739-1742.

Nathan, C. F., H. W. Murray, M. E. Wiebe, B. Y. Rubin. 1983. Identification of interferon-γ as the lymphokine that activates human macrophage oxidative metabolism and antimicrobial activity. J. Exp. Med. 158: 670-689.

Goerdt, S., O. Politz, K. Schledzewski, R. Birk, A. Gratchev, P. Guillot, N. Hakiy, C. D. Klemke, E. Dippel, V. Kodelja, C. E. Orfanos. 1999. Alternative versus classical activation of macrophages. Pathobiology 67: 222-226.

Mills, C. D., K. Kincaid, J. M. Alt, M. J. Heilman, A. M. Hill. 2000. M-1/M-2 macrophages and the Th1/Th2 paradigm. J. Immunol. 164: 6166-6173.

Mosser, D. M.. 2003. The many faces of macrophage activation. J. Leukocyte Biol. 73: 209-212.

Mantovani, A., S. Sozzani, M. Locati, P. Allavena, A. Sica. 2002. Macrophage polarization: tumor-associated macrophages as a paradigm for polarized M2 mononuclear phagocytes. Trends Immunol. 23: 549-555.

Stein, M., S. Keshav, N. Harris, S. Gordon. 1992. Interleukin 4 potently enhances murine macrophage mannose receptor activity: a marker of alternative immunologic macrophage activation. J. Exp. Med. 176: 287-292.

Munder, M., K. Eichmann, M. Modolell. 1998. Alternative metabolic states in murine macrophages reflected by the nitric oxide synthase/arginase balance: competitive regulation by CD4+ T cells correlates with Th1/Th2 phenotype. J. Immunol. 160: 5347-5354.

Zhu, Z., T. Zheng, R. J. Homer, Y. K. Kim, N. Y. Chen, L. Cohn, Q. Hamid, J. A. Elias. 2004. Acidic mammalian chitinase in asthmatic Th2 inflammation and IL-13 pathway activation. Science 304: 1678-1682.

Raes, G., P. De Baetselier, W. Noel, A. Beschin, F. Brombacher, G. Hassanzadeh Gh. 2002. Differential expression of FIZZ1 and Ym1 in alternatively versus classically activated macrophages. J. Leukocyte Biol. 71: 597-602.

Scotton, C. J., F. O. Martinez, M. J. Smelt, M. Sironi, M. Locati, A. Mantovani, S. Sozzani. 2005. Transcriptional profiling reveals complex regulation of the monocyte IL-1β system by IL-13. J. Immunol. 174: 834-845.

MacMicking, J., Q. W. Xie, C. Nathan. 1997. Nitric oxide and macrophage function. Annu. Rev. Immunol. 15: 323-350.

Martinez, F. O., M. Sironi, A. Vecchi, F. Colotta, A. Mantovani, M. Locati. 2004. IL-8 induces a specific transcriptional profile in human neutrophils: synergism with LPS for IL-1 production. Eur. J. Immunol. 34: 2286-2292.

Bolstad, B. M., F. Collin, K. M. Simpson, R. A. Irizarry, T. P. Speed. 2004. Experimental design and low-level analysis of microarray data. Int. Rev. Neurobiol. 60: 25-58.

Irizarry, R. A., B. M. Bolstad, F. Collin, L. M. Cope, B. Hobbs, T. P. Speed. 2003. Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Res. 31: e15

Raychaudhuri, S., J. M. Stuart, R. B. Altman. 2000. Principal components analysis to summarize microarray experiments: application to sporulation time series. Pac. Symp. Biocomput. 5: 452-463.

Reiner, A., D. Yekutieli, Y. Benjamini. 2003. Identifying differentially expressed genes using false discovery rate controlling procedures. Bioinformatics 19: 368-375.

Yeung, K. Y., D. R. Haynor, W. L. Ruzzo. 2001. Validating clustering for gene expression data. Bioinformatics 17: 309-318.

Eisen, M. B., P. T. Spellman, P. O. Brown, D. Botstein. 1998. Cluster analysis and display of genome-wide expression patterns. Proc. Natl. Acad. Sci. USA 95: 14863-14868.

Dennis, G., Jr, B. T. Sherman, D. A. Hosack, J. Yang, W. Gao, H. C. Lane, R. A. Lempicki. 2003. DAVID: Database for Annotation, Visualization, and Integrated Discovery. Genome Biol. 4: P3

Nikitin, A., S. Egorov, N. Daraselia, I. Mazo. 2003. Pathway studio–the analysis and navigation of molecular networks. Bioinformatics 19: 2155-2157.

Pattyn, F., F. Speleman, A. De Paepe, J. Vandesompele. 2003. RTPrimerDB: the real-time PCR primer and probe database. Nucleic Acids Res. 31: 122-123.

Payton, M., S. Coats. 2002. Cyclin E2, the cycle continues. Int. J. Biochem. Cell Biol. 34: 315-320.

Doree, M., T. Hunt. 2002. From Cdc2 to Cdk1: when did the cell cycle kinase join its cyclin partner?. J. Cell Sci. 115: 2461-2464.

Vidal, A., A. Koff. 2000. Cell-cycle inhibitors: three families united by a common cause. Gene 247: 1-15.

Carlin, J. M., E. C. Borden, G. I. Byrne. 1989. Interferon-induced indoleamine 2,3-dioxygenase activity inhibits Chlamydia psittaci replication in human macrophages. J. Interferon Res. 9: 329-337.

Hissong, B. D., G. I. Byrne, M. L. Padilla, J. M. Carlin. 1995. Upregulation of interferon-induced indoleamine 2,3-dioxygenase in human macrophage cultures by lipopolysaccharide, muramyl tripeptide, and interleukin-1. Cell Immunol. 160: 264-269.

Martinez-Pomares, L., D. M. Reid, G. D. Brown, P. R. Taylor, R. J. Stillion, S. A. Linehan, S. Zamze, S. Gordon, S. Y. Wong. 2003. Analysis of mannose receptor regulation by IL-4, IL-10, and proteolytic processing using novel monoclonal antibodies. J. Leukocyte Biol. 73: 604-613.

Linehan, S. A., P. S. Coulson, R. A. Wilson, A. P. Mountford, F. Brombacher, L. Martinez-Pomares, S. Gordon. 2003. IL-4 receptor signaling is required for mannose receptor expression by macrophages recruited to granulomata but not resident cells in mice infected with Schistosoma mansoni. Lab. Invest. 83: 1223-1231.

Cornicelli, J. A., D. Butteiger, D. L. Rateri, K. Welch, A. Daugherty. 2000. Interleukin-4 augments acetylated LDL-induced cholesterol esterification in macrophages. J. Lipid Res. 41: 376-383.

Barrios-Rodiles, M., K. Chadee. 1998. Novel regulation of cyclooxygenase-2 expression and prostaglandin E2 production by IFN-γ in human macrophages. J. Immunol. 161: 2441-2448.

Hashimoto, S., T. Suzuki, H. Y. Dong, N. Yamazaki, K. Matsushima. 1999. Serial analysis of gene expression in human monocytes and macrophages. Blood 94: 837-844.

Verreck, F. A., T. de Boer, D. M. Langenberg, M. A. Hoeve, M. Kramer, E. Vaisberg, R. Kastelein, A. Kolk, R. de Waal-Malefyt, T. H. Ottenhoff. 2004. Human IL-23-producing type 1 macrophages promote but IL-10-producing type 2 macrophages subvert immunity to (myco)bacteria. Proc. Natl. Acad. Sci. USA 101: 4560-4565.

Cheung, D. L., J. A. Hamilton. 1992. Regulation of human monocyte DNA synthesis by colony-stimulating factors, cytokines, and cyclic adenosine monophosphate. Blood 79: 1972-1981.

Bischof, R. J., D. Zafiropoulos, J. A. Hamilton, I. K. Campbell. 2000. Exacerbation of acute inflammatory arthritis by the colony-stimulating factors CSF-1 and granulocyte macrophage (GM)-CSF: evidence of macrophage infiltration and local proliferation. Clin. Exp. Immunol. 119: 361-367.

Lehrke, M., M. A. Lazar. 2004. Inflamed about obesity. Nat. Med. 10: 126-127.

Pradalier, A., D. Vincent. 2000. Aspirin: allergy or intolerance. Rev. Med. Interne 21: (Suppl. 1):75s-82s.

Sanchez-Borges, M., A. Capriles-Hulett, F. Caballero-Fonseca. 2004. Adverse reactions to selective cyclooxygenase-2 inhibitors (coxibs). Am. J. Ther. 11: 494-500.

Chalfant, C. E., S. Spiegel. 2005. Sphingosine 1-phosphate and ceramide 1-phosphate: expanding roles in cell signaling. J. Cell Sci. 118: 4605-4612.

Duchateau, P. N., C. R. Pullinger, M. H. Cho, C. Eng, J. P. Kane. 2001. Apolipoprotein L gene family: tissue-specific expression, splicing, promoter regions; discovery of a new gene. J. Lipid Res. 42: 620-630.

Phillips, R. J., M. Lutz, B. Premack. 2005. Differential signaling mechanisms regulate expression of CC chemokine receptor-2 during monocyte maturation. J. Inflamm. 2: 14

Sallusto, F., P. Schaerli, P. Loetscher, C. Schaniel, D. Lenig, C. R. Mackay, S. Qin, A. Lanzavecchia. 1998. Rapid and coordinated switch in chemokine receptor expression during dendritic cell maturation. Eur. J. Immunol. 28: 2760-2769.

Sozzani, S., P. Allavena, G. D’Amico, W. Luini, G. Bianchi, M. Kataura, T. Imai, O. Yoshie, R. Bonecchi, A. Mantovani. 1998. Differential regulation of chemokine receptors during dendritic cell maturation: a model for their trafficking properties. J. Immunol. 161: 1083-1086.

Greenberg, S., F. Di Virgilio, T. H. Steinberg, S. C. Silverstein. 1988. Extracellular nucleotides mediate Ca2+ fluxes in J774 macrophages by two distinct mechanisms. J. Biol. Chem. 263: 10337-10343.

Di Virgilio, F., P. Chiozzi, D. Ferrari, S. Falzoni, J. M. Sanz, A. Morelli, M. Torboli, G. Bolognesi, O. R. Baricordi. 2001. Nucleotide receptors: an emerging family of regulatory molecules in blood cells. Blood 97: 587-600.

Murata, Y., T. Ohteki, S. Koyasu, J. Hamuro. 2002. IFN-γ and pro-inflammatory cytokine production by antigen-presenting cells is dictated by intracellular thiol redox status regulated by oxygen tension. Eur. J. Immunol. 32: 2866-2873.

Ohteki, T.. 2002. Critical role for IL-15 in innate immunity. Curr. Mol. Med. 2: 371-380.

Peiser, L., S. Gordon. 2001. The function of scavenger receptors expressed by macrophages and their role in the regulation of inflammation. Microbes Infect. 3: 149-159.

Willment, J. A., A. S. Marshall, D. M. Reid, D. L. Williams, S. Y. Wong, S. Gordon, G. D. Brown. 2005. The human β-glucan receptor is widely expressed and functionally equivalent to murine Dectin-1 on primary cells. Eur. J. Immunol. 35: 1539-1547.

Relloso, M., A. Puig-Kroger, O. M. Pello, J. L. Rodriguez-Fernandez, G. de la Rosa, N. Longo, J. Navarro, M. A. Munoz-Fernandez, P. Sanchez-Mateos, A. L. Corbi. 2002. DC-SIGN (CD209) expression is IL-4 dependent and is negatively regulated by IFN, TGF-β, and anti-inflammatory agents. J. Immunol. 168: 2634-2643.

Kanazawa, N., K. Tashiro, Y. Miyachi. 2004. Signaling and immune regulatory role of the dendritic cell immunoreceptor (DCIR) family lectins: DCIR, DCAR, dectin-2 and BDCA-2. Immunobiology 209: 179-190.

Kato, M., S. Khan, N. Gonzalez, B. P. O’Neill, K. J. McDonald, B. J. Cooper, N. Z. Angel, D. N. Hart. 2003. Hodgkin’s lymphoma cell lines express a fusion protein encoded by intergenically spliced mRNA for the multilectin receptor DEC-205 (CD205) and a novel C-type lectin receptor DCL-1. J. Biol. Chem. 278: 34035-34041.

Gratchev, A., P. Guillot, N. Hakiy, O. Politz, C. E. Orfanos, K. Schledzewski, S. Goerdt. 2001. Alternatively activated macrophages differentially express fibronectin and its splice variants and the extracellular matrix protein βIG-H3. Scand. J. Immunol. 53: 386-392.

Blackwell, J. M., S. Searle, H. Mohamed, J. K. White. 2003. Divalent cation transport and susceptibility to infectious and autoimmune disease: continuation of the Ity/Lsh/Bcg/Nramp1/Slc11a1 gene story. Immunol. Lett. 85: 197-203.

Raes, G., R. Van den Bergh, P. De Baetselier, G. H. Ghassabeh, C. Scotton, M. Locati, A. Mantovani, S. Sozzani. 2005. Arginase-1 and Ym1 are markers for murine, but not human, alternatively activated myeloid cells. J. Immunol. 174: 6561 author reply 6561–6562.