Tobacco microbial screening and application in improving the quality of tobacco in different physical states

Alagić S, Selekcija IS, Palić R, Stojanović G, Nikolić M (2002) Chemical composition and antimicrobial activity of the essential oil of the oriental tobacco Yaka. J Essent Oil Res 14(3):230–232. https://doi.org/10.1080/10412905.2002.9699832 Baker RR, Coburn S, Liu C, Tetteh J (2005) Pyrolysis of saccharide tobacco ingredients: a TGA-FTIR investigation. J Anal Appl Pyrolysis 74(1–2):171–180. https://doi.org/10.1016/j.jaap.2004.09.005 Bano I, Tanveer S, Ali B (2022) Plant growth promoting potential of rhizobacteria isolated from Cannabis Sativa L. Pak-Euro J Med Life Sci 5(2):291–300. https://doi.org/10.31580/pjmls.v5i2.2568 Banožić M, Jokić S, Ačkar Đ, Blažić M, Šubarić D (2020) Carbohydrates-key players in tobacco aroma formation and quality determination. Molecules 25(7):1734. https://doi.org/10.3390/molecules25071734 Belda I, Ruiz J, Esteban-Fernández A, Navascués E, Marquina D, Santos A, Moreno-Arribas MV (2017) Microbial contribution to wine aroma and its intended use for wine quality improvement. Molecules 22(2):189. https://doi.org/10.3390/molecules22020189 Bergey DH (1994) Bergey’s manual of determinative bacteriology. Lippincott Williams & Wilkins, Philadelphia Berrada I, Benkhemmar O, Swings J, Bendaou N, Amar M (2012) Selection of halophilic bacteria for biological control of tomato gray mould caused by Botrytis cinerea. Phytopathol Mediterr. stable/43872349 Chopyk J, Chattopadhyay S, Kulkarni P, Smyth EM, Hittle LE, Paulson JN, Pop M, Buehler SS, Clark PI, Mongodin EF (2017) Temporal variations in cigarette tobacco bacterial community composition and tobacco-specific nitrosamine content are influenced by brand and storage conditions. Front Microbiol 8:358. https://doi.org/10.3389/fmicb.2017.00358 Dai J, Dong A, Xiong G, Liu Y, Qiu D (2020) Production of highly active extracellular amylase and cellulase from Bacillus subtilis ZIM3 and a recombinant strain with a potential application in tobacco fermentation. Front Microbiol 11:1539. https://doi.org/10.3389/fmicb.2020.01539 Devanthi PVP, Gkatzionis K (2019) Soy sauce fermentation: microorganisms, aroma formation, and process modification. Food Res Int 120:364–374. https://doi.org/10.1016/j.foodres.2019.03.010 Di Giacomo M, Paolino M, Silvestro D, Vigliotta G, Imperi F, Visca P, Alifano P, Parente D (2007) Microbial community structure and dynamics of dark fire-cured tobacco fermentation. Appl Environ Microbiol 73(3):825–837. https://doi.org/10.1128/AEM.02378-06 Ding Y, Zhu L, Liu S, Yu H, Dai Y (2013) Analytical method of free and conjugated neutral aroma components in tobacco by solvent extraction coupled with comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry. J Chromatogr A 1280:122–127. https://doi.org/10.1016/j.chroma.2013.01.028 Dome K, Podgorbunskikh E, Bychkov A, Lomo-ky O (2020) Changes in the crystallinity degree of starch having different types of crystal structure after mechanical pretreatment. Polymers 12(3):641. https://doi.org/10.3390/polym12030641 English CF, Bell EJ, Berger AJ (1967) Isolation of thermophiles from broadleaf tobacco and effect of pure culture inoculation on cigar aroma and mildness. Appl Microbiol 15(1):117. https://doi.org/10.1128/am.15.1.117-119.1967 Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evol Int J Organic Evol 39(4):783–791. https://doi.org/10.1111/j.1558-5646.1985.tb00420.x Gong XW, Yang JK, Duan YQ, Dong JY, Zhe W, Le W, Li QH, Zhang KQ (2009) Isolation and characterization of Rhodococcus sp Y22 and its potential application to tobacco processing. Res Microbiol 160(3):200–204. https://doi.org/10.1016/j.resmic.2009.02.004 Han T, You C, Zhang L, Feng C, Zhang C, Wang J, Kong F (2016) Biocontrol potential of antagonist Bacillus subtilis Tpb55 against tobacco black shank. Biocontrol 61(2):195–205. https://doi.org/10.1007/s10526-015-9705-0 He S, Tang M, Sun H, Ye Y, Cao X, Wang J (2019) Potential of water dropwort (Oenanthe javanica DC.) powder as an ingredient in beverage: functional, thermal, dissolution and dispersion properties after superfine grinding. Powder Technol 353:516–525. https://doi.org/10.1016/j.powtec.2019.05.048 Huang J, Yang J, Duan Y, Gu W, Gong X, Zhe W, Su C, Zhang K-Q (2010) Bacterial diversities on unaged and aging flue-cured tobacco leaves estimated by 16S rRNA sequence analysis. Appl Microbiol Biotechnol 88(2):553–562. https://doi.org/10.1007/s00253-010-2763-4 Jiang Y, Chen X, Zhao G, Liu J, Xie Y, Li Y, Gu H, Zou C (2021) Endophytic fungal community of tobacco leaves and their potential role in the formation of cherry-red tobacco. Front Microbiol 12:658116. https://doi.org/10.3389/fmicb.2021.658116 Johnson RR, Nicholson JA (1965) The structure, chemistry, and synthesis of solanone a new anomalous terpenoid ketone from tobacco1. J Organic Chem 30(9):2918–2921. https://doi.org/10.1021/jo01020a009 Joyce OT, Chakraborty SK, Tripathi MK, Kotwaliwale N, Chandra P (2018) Quality characteristics of sauerkraut fermented by using a Lactobacillus paracasei starter culture grown in tofu whey. Food Sci Technol Int 24(3):187–197. https://doi.org/10.1177/1082013217741798 Jung J, Jeong H, Kim HJ, Lee D-W, Lee SJ (2016) Complete genome sequence of Bacillus oceanisediminis 2691, a reservoir of heavy-metal resistance genes. Mar Genomics 30:73–76. https://doi.org/10.1016/j.margen.2016.07.002 Kumar S, Stecher G, Tamura K (2016) MEGA7: molecular evolutionary genetics analysis version 70 for bigger datasets. Mol Biol Evol 33(7):1870–1874. https://doi.org/10.1093/molbev/msw054 Li P, Wu M, Xie J (2003) Changes in levels of amino acids and basic components in burley tobacco produced by roasting. Beitr Tabakforsch Int 20(7):459–466. https://doi.org/10.2478/cttr-2013-0761 Li J, Zhao Y, Qin Y, Shi H (2020) Influence of microbiota and metabolites on the quality of tobacco during fermentation. BMC Microbiol 20(1):1–15. https://doi.org/10.1186/s12866-020-02035-8 Liu J, Ma G, Chen T, Hou Y, Yang S, Zhang K-Q, Yang J (2015) Nicotine-degrading microorganisms and their potential applications. Appl Microbiol Biotechnol 99:3775–3785. https://doi.org/10.1007/s00253-015-6525-1 Liu F, Wu Z, Zhang X, Xi G, Zhao Z, Lai M, Zhao M (2021) Microbial community and metabolic function analysis of cigar tobacco leaves during fermentation. MicrobiologyOpen 10(2):e1171. https://doi.org/10.1002/mbo3.1171 Luo B, An X, Yang J, Liu L, Zhang H, Hu Q, Zhang R, Nie S, Wu S, Cao H (2021) Isolation and utilization of tobacco-based cellulose nanofiber (TCNF) for high performance reconstructed tobacco sheet (RTS). Carbohydr Polym 261:117865. https://doi.org/10.1016/j.carbpol.2021.117865 Malhotra R, Noorwez S, Satyanarayana T (2000) Production and partial characterization of thermostable and calcium-independent α-amylase of an extreme thermophile Bacillus thermooleovorans NP54. Lett Appl Microbiol 31(5):378–384. https://doi.org/10.1046/j.1472-765x.2000.00830.x Mitsui K, David F, Dumont E, Ochiai N, Tamura H, Sandra P (2015) LC fractionation followed by pyrolysis GC-MS for the in-depth study of aroma compounds formed during tobacco combustion. J Anal Appl Pyrolysis 116:68–74. https://doi.org/10.1016/j.jaap.2015.10.004 Nawaz MZ, Subin Sasidharan R, Alghamdi HA, Dang H (2022) Understanding interaction patterns within Deep-Sea microbial communities and their potential applications. Mar Drugs 20(2):108. https://doi.org/10.3390/md20020108 Nei M, Kumar S (2000) Molecular evolution and phylogenetics. Oxford University Press, Oxford Palic R, Stojanovic G, Alagic S, Nikolic M, Lepojevic Z (2002) Chemical composition and antimicrobial activity of the essential oil and CO2 extracts of the oriental tobacco. Prilep Flavour Fragrance J 17(5):323–326. https://doi.org/10.1002/ffj.1084 Pereira LS, MrF C, Botelho BG, Sena MM (2016) Calibration transfer from powder mixtures to intact tablets: a new use in pharmaceutical analysis for a known tool. Talanta 147:351–357. https://doi.org/10.1016/j.talanta.2015.10.006 Qin Y, Gong H (2016) NIR models for predicting total sugar in tobacco for samples with different physical states. Infrared Phys Technol 77:239–243. https://doi.org/10.1016/j.infrared.2016.06.005 Ramachandraiah K, Chin KB (2016) Evaluation of ball-milling time on the physicochemical and antioxidant properties of persimmon by-products powder. Innov Food Sci Emerg Technol 37:115–124. https://doi.org/10.1016/j.ifset.2016.08.005 Roemer E, Schorp MK, Piadé JJ, Seeman JI, Leyden DE, Haussmann HJ (2012) Scientific assessment of the use of sugars as cigarette tobacco ingredients: a review of published and other publicly available studies. Crit Rev Toxicol 42(3):244–278. https://doi.org/10.3109/10408444.2011.650789 Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4(4):406–425. https://doi.org/10.1093/oxfordjournals.molbev.a040454 Shen G, Zhang S, Liu X, Jiang Q, Ding W (2018) Soil acidification amendments change the rhizosphere bacterial community of tobacco in a bacterial wilt affected field. Appl Microbiol Biotechnol 102(22):9781–9791. https://doi.org/10.1007/s00253-018-9347-0 Song Z, Li T, Gong C (2009) A review on starch changes in tobacco leaves during flue-curing. Front Agric China 3(4):435–439. https://doi.org/10.1007/s11703-009-0076-0 Su C, Gu W, Zhe W, Zhang K-Q, Duan Y, Yang J (2011) Diversity and phylogeny of bacteria on Zimbabwe tobacco leaves estimated by 16S rRNA sequence analysis. Appl Microbiol Biotechnol 92(5):1033–1044. https://doi.org/10.1007/s00253-011-3367-3 Su C, Zhang K-Z, Cao X-Z, Yang J-G (2020) Effects of saccharomycopsis fibuligera and saccharomyces cerevisiae inoculation on small fermentation starters in Sichuan-style Xiaoqu liquor. Food Res Int 137:109425. https://doi.org/10.1016/j.foodres.2020.109425 Sun Y, Ye H, Hu B, Wang W, Lei S, Wang X, Zhou L, Zeng X (2015) Changes in crystal structure of chickpea starch samples during processing treatments: an X-ray diffraction and starch moisture analysis study. Carbohydr Polym 121:169–174. https://doi.org/10.1016/j.carbpol.2014.12.048 Talhout R, Opperhuizen A, Amsterdam J (2006) Sugars as tobacco ingredient: Effects on mainstream smoke composition. Food Chem Toxicol 44(11):1789–1798. https://doi.org/10.1016/j.fct.2006.06.016 Tao J, Chen Q, Chen S, Lu P, Chen Y, Jin J, Li J, Xu Y, He W, Long T (2022) Metagenomic insight into the microbial degradation of organic compounds in fermented plant leaves. Environ Res 214:113902. https://doi.org/10.1016/j.envres.2022.113902 Torikaiu K, Uwano Y, Nakamori T, Tarora W, Takahashi H (2005) Study on tobacco components involved in the pyrolytic generation of selected smoke constituents. Food Chem Toxicol 43(4):559–568. https://doi.org/10.1016/j.fct.2004.12.011 Tsuchiya Y, Nakamura T, Izumi Y, Okazaki K, Shinano T, Kubo Y, Katsuhara M, Sasaki T, Yamamoto Y (2021) Physiological role of aerobic fermentation constitutively expressed in an aluminum-tolerant cell line of tobacco (nicotiana tabacum). Plant Cell Physiol 62(9):1460–1477. https://doi.org/10.1093/pcp/pcab131 Vigliotta G, Di Giacomo M, Carata E, Massardo DR (2007) Nitrite metabolism in Debaryomyces hansenii TOB-Y7, a yeast strain involved in tobacco fermentation. Appl Microbiol Biotechnol 75(3):633–645. https://doi.org/10.1007/s00253-007-0867-2 Wang S, Xu P, Tang H, Meng J, Liu X, Huang J, Chen H, Du Y, Blankespoor H (2004) Biodegradation and detoxification of nicotine in tobacco solid waste by a Pseudomonas sp. Biotechnol Lett 26(19):1493–1496. https://doi.org/10.1023/B:BILE.0000044450.16235.65 Wang X, Xu L, Yin Z, Xia X (2010) Research on effective extraction of nicotine from tobacco waste by microbial enzyme reaction. Chin J Environ Eng 4(12):2875–2878 Wang R, Zhang H, Sun L, Qi G, Chen S, Zhao X (2017) Microbial community composition is related to soil biological and chemical properties and bacterial wilt outbreak. Sci Rep 7(1):343. https://doi.org/10.1038/s41598-017-00472-6 Wang F, Zhao H, Xiang H, Wu L, Men X, Qi C, Chen G, Zhang H, Wang Y, Xian M (2018a) Species diversity and functional prediction of surface bacterial communities on aging flue-cured tobaccos. Curr Microbiol 75(10):1306–1315. https://doi.org/10.1007/s00284-018-1525-x Wang J-A, Yang G-H, Li C-X (2018b) Zonal distribution of neutral aroma components in flue-cured tobacco leaves. Phytochem Lett 24:125–130. https://doi.org/10.1016/j.phytol.2018.01.014 Wei X, Deng X, Cai D, Ji Z, Wang C, Yu J, Li J, Chen S (2014) Decreased tobacco-specific nitrosamines by microbial treatment with Bacillus amyloliquefaciens DA9 during the air-curing process of burley tobacco. J Agric Food Chem 62(52):12701–12706. https://doi.org/10.1021/jf504084z Wu X, Zhu P, Li D, Zheng T, Cai W, Li J, Zhang B, Zhu B, Zhang J, Du G (2021) Bioaugmentation of Bacillus amyloliquefaciens-Bacillus kochii co-cultivation to improve sensory quality of flue-cured tobacco. Arch Microbiol 203(9):5723–5733. https://doi.org/10.1007/s00203-021-02556-4 Wu X, Cai W, Zhu P, Peng Z, Zheng T, Li D, Li J, Zhou G, Du G, Zhang J (2022) Profiling the role of microorganisms in quality improvement of the aged flue-cured tobacco. BMC Microbiol 22(1):1–16. https://doi.org/10.1186/s12866-022-02597-9 Yan S, Xiangsong C, Xiang X (2019) Improvement of the aroma of lily rice wine by using aroma-producing yeast strain Wickerhamomyces anomalus HN006. AMB Express 9(1):1–14. https://doi.org/10.1186/s13568-019-0811-8 Yan X, Cheng J-R, Wang Y-T, Zhu M-J (2020) Enhanced lignin removal and enzymolysis efficiency of grass waste by hydrogen peroxide synergized dilute alkali pretreatment. Bioresour Technol 301:122756. https://doi.org/10.1016/j.biortech.2020.122756 Yang Y, Chu G, Zhou G, Jiang J, Yuan K, Pan Y, Song Z, Li Z, Xia Q, Lu X (2016) Rapid determination of the volatile components in tobacco by ultrasound-microwave synergistic extraction coupled to headspace solid-phase microextraction with gas chromatography-mass spectrometry. J Sep Sci 39(6):1173–1181. https://doi.org/10.1002/jssc.201501185 Yuan Y, Zou P, Zhou J, Geng Y, Fan J, Clark J, Li Y, Zhang C (2019) Microwave-assisted hydrothermal extraction of non-structural carbohydrates and hemicelluloses from tobacco biomass. Carbohydr Polym 223:115043. https://doi.org/10.1016/j.carbpol.2019.115043 Zhang J, Wang J, Fang C, Song F, Xin Y, Qu L, Ding K (2010) Bacillus oceanisediminis sp. nov., isolated from marine sediment. Int J Syst Evol Microbiol 60(12):2924–2929. https://doi.org/10.1099/ijs.0.019851-0 Zhang Q, Geng Z, Li D, Ding Z (2020) Characterization and discrimination of microbial community and co-occurrence patterns in fresh and strong flavor style flue-cured tobacco leaves. Microbiologyopen 9(2):e965. https://doi.org/10.1002/mbo3.965 Zhang Y, Li R, Shang G, Zhu H, Wang H, Pandiselvam R, Lei D, Ai Z, Liu Y (2022) Effects of multiscale-mechanical fragmentation on techno-functional properties of industrial tobacco waste. Powder Technol 402:117327. https://doi.org/10.1016/j.powtec.2022.117327 Zhao L, Zhu C, Gao Y, Wang C, Li X, Shu M, Shi Y, Zhong W (2012) Nicotine degradation enhancement by Pseudomonas stutzeri ZCJ during aging process of tobacco leaves. World J Microbiol Biotechnol 28(5):2077–2086. https://doi.org/10.1007/s11274-012-1010-9 Zhao X, Chen J, Chen F, Wang X, Zhu Q, Ao Q (2013) Surface characterization of corn stalk superfine powder studied by FTIR and XRD. Colloids Surf B 104:207–212. https://doi.org/10.1016/j.colsurfb.2012.12.003 Zhao X, Zhu H, Chen J, Ao Q (2015a) FTIR, XRD and SEM analysis of ginger powders with different size. J Food Process Preserv 39(6):2017–2026. https://doi.org/10.1111/jfpp.12442 Zhao X, Zhu H, Zhang G, Tang W (2015b) Effect of superfine grinding on the physicochemical properties and antioxidant activity of red grape pomace powders. Powder Technol 286:838–844. https://doi.org/10.1016/j.powtec.2015.09.025 Zheng T, Zhang Q, Wu Q, Li D, Wu X, Li P, Zhou Q, Cai W, Zhang J, Du G (2022) Effects of inoculation with acinetobacter on fermentation of cigar tobacco leaves. Front Microbiol. https://doi.org/10.3389/fmicb.2022.911791 Zhou J, Yu L, Zhang J, Zhang X, Xue Y, Liu J, Zou X (2020) Characterization of the core microbiome in tobacco leaves during aging. Microbiologyopen 9(3):e984. https://doi.org/10.1002/mbo3.984 Zhu X, Tan L, Feng G, Yang J, Gao Y, Dai Y (2015) Research on degradation of cellulose using enzyme treatment in flue-cured tobacco by 13C NMR spectroscopy. Cellulose 22(4):2693–2702. https://doi.org/10.1007/s10570-015-0676-1