Thermosetting supramolecular polymerization of compartmentalized DNA fibers with stereo sequence and length control

De Greef, 2009, Supramolecular polymerization, Chem. Rev., 109, 5687, 10.1021/cr900181u Sorrenti, 2017, Non-equilibrium supramolecular polymerization, Chem. Soc. Rev., 46, 5476, 10.1039/C7CS00121E Aida, 2012, Functional supramolecular polymers, Science, 335, 813, 10.1126/science.1205962 Gröschel, 2013, Guided hierarchical co-assembly of soft patchy nanoparticles, Nature, 503, 247, 10.1038/nature12610 Zhuang, 2016, Hierarchical nanowires synthesized by supramolecular stepwise polymerization, Angew. Chem. Int. Ed. Engl., 55, 12522, 10.1002/anie.201607059 Chin, 2018, Covalent-supramolecular hybrid polymers as muscle-inspired anisotropic actuators, Nat. Commun., 9, 2395, 10.1038/s41467-018-04800-w Friedhoff, 1998, Rapid assembly of Alzheimer-like paired helical filaments from microtubule-associated protein tau monitored by fluorescence in solution, Biochemistry, 37, 10223, 10.1021/bi980537d Council, 1994 Whitesides, 2002, Self-assembly at all scales, Science, 295, 2418, 10.1126/science.1070821 O'Leary, 2011, Multi-hierarchical self-assembly of a collagen mimetic peptide from triple helix to nanofibre and hydrogel, Nat. Chem., 3, 821, 10.1038/nchem.1123 Leikin, 1995, Temperature-favoured assembly of collagen is driven by hydrophilic not hydrophobic interactions, Nat. Struct. Biol., 2, 205, 10.1038/nsb0395-205 Wallace, 1985, The role of hydrophobic bonding in collagen fibril formation: a quantitative model, Biopolymers, 24, 1705, 10.1002/bip.360240905 Aliprandi, 2016, Controlling and imaging biomimetic self-assembly, Nat. Chem., 8, 10, 10.1038/nchem.2383 Cui, 2007, Block copolymer assembly via kinetic control, Science, 317, 647, 10.1126/science.1141768 Korevaar, 2012, Pathway complexity in supramolecular polymerization, Nature, 481, 492, 10.1038/nature10720 Matern, 2019, Revising complex supramolecular polymerization under kinetic and thermodynamic control, Angew. Chem. Int. Ed. Engl., 58, 16730, 10.1002/anie.201905724 Petzetakis, 2011, Cylindrical micelles from the living crystallization-driven self-assembly of poly(lactide)-containing block copolymers, Chem. Sci., 2, 955, 10.1039/C0SC00596G Hifsudheen, 2017, The helix to super-helix transition in the self-assembly of π-systems: superseding of molecular chirality at hierarchical level, Angew. Chem. Int. Ed. Engl., 56, 12634, 10.1002/anie.201707392 Gröschel, 2012, Precise hierarchical self-assembly of multicompartment micelles, Nat. Commun., 3, 710, 10.1038/ncomms1707 Zhang, 2019, Hierarchical self-assembly of cholesterol-DNA nanorods, Bioconjug. Chem., 30, 1845, 10.1021/acs.bioconjchem.9b00322 Tantakitti, 2016, Energy landscapes and functions of supramolecular systems, Nat. Mater., 15, 469, 10.1038/nmat4538 Chen, 2011, Directed self-assembly of a colloidal kagome lattice, Nature, 469, 381, 10.1038/nature09713 Gilroy, 2010, Monodisperse cylindrical micelles by crystallization-driven living self-assembly, Nat. Chem., 2, 566, 10.1038/nchem.664 Nazemi, 2016, Monodisperse cylindrical micelles and block Comicelles of controlled length in aqueous media, J. Am. Chem. Soc., 138, 4484, 10.1021/jacs.5b13416 Qiu, 2015, Micelle assembly. Multidimensional hierarchical self-assembly of amphiphilic cylindrical block comicelles, Science, 347, 1329, 10.1126/science.1261816 Vyborna, 2015, DNA-grafted supramolecular polymers: helical ribbon structures formed by self-assembly of pyrene-DNA chimeric oligomers, Angew. Chem. Int. Ed. Engl., 54, 7934, 10.1002/anie.201502066 Engelen, 2018, Accelerating DNA-based computing on a supramolecular polymer, J. Am. Chem. Soc., 140, 9758, 10.1021/jacs.8b06146 Wijnands, 2019, DNA-functionalized supramolecular polymers: dynamic multicomponent assemblies with emergent properties, Bioconjug. Chem., 30, 1905, 10.1021/acs.bioconjchem.9b00095 Freeman, 2018, Reversible self-assembly of superstructured networks, Science, 362, 808, 10.1126/science.aat6141 Wijnands, 2018, Controlling protein activity by dynamic recruitment on a supramolecular polymer platform, Nat. Commun., 9, 65, 10.1038/s41467-017-02559-0 Appukutti, 2018, High definition polyphosphoesters: between nucleic acids and plastics, Polym. Chem., 9, 2210, 10.1039/C8PY00251G Cole, 2017, Protein-like structure and activity in synthetic polymers, J. Polym. Sci. Part A: Polym. Chem., 55, 191, 10.1002/pola.28378 Gody, 2013, Rapid and quantitative one-pot synthesis of sequence-controlled polymers by radical polymerization, Nat. Commun., 4, 2505, 10.1038/ncomms3505 Lutz, 2013, Sequence-controlled polymers, Science, 341, 1238149, 10.1126/science.1238149 Appukutti, 2020, Sequence isomerism in uniform polyphosphoesters programmes self-assembly and folding, Chem. Commun. (Camb), 56, 5307, 10.1039/D0CC01319F Edwardson, 2014, An efficient and modular route to sequence-defined polymers appended to DNA, Angew. Chem. Int. Ed. Engl., 53, 4567, 10.1002/anie.201310937 Chidchob, 2016, Synergy of two assembly languages in DNA nanostructures: self-assembly of sequence-defined polymers on DNA cages, J. Am. Chem. Soc., 138, 4416, 10.1021/jacs.5b12953 Bousmail, 2018, Cyanine-mediated DNA nanofiber growth with controlled dimensionality, J. Am. Chem. Soc., 140, 9518, 10.1021/jacs.8b04157 Golder, 2018, Stereochemical sequence dictates unimolecular diblock copolymer assembly, J. Am. Chem. Soc., 140, 1596, 10.1021/jacs.7b12696 Garcia, 2018, Chirality effects on peptide self-assembly unraveled from molecules to materials, Chem, 4, 1862, 10.1016/j.chempr.2018.05.016 Goodman, 2014 Israelachvili, 2011, 1 Ryu, 2005, Transformation of isotropic fluid to nematic gel triggered by dynamic bridging of supramolecular nanocylinders, J. Am. Chem. Soc., 127, 14170, 10.1021/ja055583x Gidi, 2018, Efficient one-step PEG-Silane passivation of glass surfaces for single-molecule fluorescence studies, ACS Appl. Mater. Interfaces, 10, 39505, 10.1021/acsami.8b15796 Wehner, 2020, Supramolecular polymerization through kinetic pathway control and living chain growth, Nat. Rev. Chem., 4, 38, 10.1038/s41570-019-0153-8 Ogi, 2016, Impact of alkyl spacer length on aggregation pathways in kinetically controlled supramolecular polymerization, J. Am. Chem. Soc., 138, 670, 10.1021/jacs.5b11674 Kotch, 2006, Self-assembly of synthetic collagen triple helices, Proc. Natl. Acad. Sci. U. S. A., 103, 3028, 10.1073/pnas.0508783103 Davies, 2006, Self-assembly of surfactant vesicles that transform into viscoelastic wormlike micelles upon heating, J. Am. Chem. Soc., 128, 6669, 10.1021/ja060021e Majhi, 2002, Temperature-induced micelle-vesicle transitions in DMPC-SDS and DMPC-DTAB mixtures studied by calorimetry and dynamic light scattering, J. Phys. Chem. B, 106, 10753, 10.1021/jp025849b Venkata Rao, 2017, Thermally bisignate supramolecular polymerization, Nat. Chem., 9, 1133, 10.1038/nchem.2812 Chang, 2018, High-performance pH-switchable supramolecular thermosets via cation-π interactions, Adv. Mater., 30, 1704234, 10.1002/adma.201704234 Legros, 2015, Crystallisation-driven self-assembly of poly(2-isopropyl-2-oxazoline)-block-poly(2-methyl-2-oxazoline) above the LCST, Soft Matter, 11, 3354, 10.1039/C5SM00313J Trinh, 2019, “Printing” DNA strand patterns on small molecules with control of valency, directionality, and sequence, Angew. Chem. Ed. Engl., 58, 3042, 10.1002/anie.201809251 Trinh, 2018, DNA-imprinted polymer nanoparticles with monodispersity and prescribed DNA-strand patterns, Nat. Chem., 10, 184, 10.1038/nchem.2893 Chidchob, 2019, Spatial presentation of cholesterol units on a DNA cube as a determinant of membrane protein-mimicking functions, J. Am. Chem. Soc., 141, 1100, 10.1021/jacs.8b11898 Markova, 2013, J- vs. H-type assembly: pentamethine cyanine (Cy5) as a near-IR chiroptical reporter, Chem. Commun. (Camb), 49, 5298, 10.1039/c3cc42103a Aggeli, 2001, Hierarchical self-assembly of chiral rod-like molecules as a model for peptide beta-sheet tapes, ribbons, fibrils, and fibers, Proc. Natl. Acad. Sci. U. S. A., 98, 11857, 10.1073/pnas.191250198 Jones, 2019, Braiding, branching and chiral amplification of nanofibres in supramolecular gels, Nat. Chem., 11, 375, 10.1038/s41557-019-0222-0 Coates, 1995, Oscillating stereocontrol: a strategy for the synthesis of thermoplastic elastomeric polypropylene, Science, 267, 217, 10.1126/science.267.5195.217 Worch, 2019, Stereochemical enhancement of polymer properties, Nat. Rev. Chem., 3, 514, 10.1038/s41570-019-0117-z Harney, 2006, Discrete, multiblock isotactic–atactic stereoblock polypropene microstructures of differing block architectures through programmable stereomodulated living Ziegler–Natta polymerization, Angew. Chem. Int. Ed. Engl., 45, 2400, 10.1002/anie.200600027