Alnæs, M., Blechta, J., Hake, J., Johansson, A., Kehlet, B., Logg, A., Richardson, C., Ring, J., Rognes, M.E., Wells, G.N.: The FEniCS Project Version 1.5. Arch. Numer. Softw. 3(100) (2015). https://doi.org/10.11588/ans.2015.100.20553
Bauer, W., Cotter, C.J.: Energy-enstrophy conserving compatible finite element schemes for the rotating shallow water equations with slip boundary conditions. J. Comput. Phys. 373, 171–187 (2018). https://doi.org/10.1016/j.jcp.2018.06.071
Bazilevs, Y., Hughes, T.J.: Weak imposition of Dirichlet boundary conditions in fluid mechanics. Comput. Fluids 36(1), 12–26 (2007). https://doi.org/10.1016/j.compfluid.2005.07.012
Brezzi, F., Fortin, M.: Mixed and hybrid finite element methods, SIAM Rev. 3 (1993). https://doi.org/10.1137/1035113
Brugnano, L., Frasca Caccia, G., Iavernaro, F.: Energy conservation issues in the numerical solution of the semilinear wave equation. Appl. Math. Comput. 270, 842–870 (2015). https://doi.org/10.1016/j.amc.2015.08.078
Brugnoli, A., Alazard, D., Pommier-Budinger, V., Matignon, D.: Interconnection of the Kirchhoff plate within the port-Hamiltonian framework. In: IEEE Conference on Decision and Control, vol. 58, pp. 6857–6862 (2019). https://doi.org/10.1109/CDC40024.2019.9029487
Brugnoli, A., Alazard, D., Pommier-Budinger, V., Matignon, D.: Port-Hamiltonian formulation and symplectic discretization of plate models Part I: Mindlin model for thick plates. Appl. Math. Model. 75, 940–960 (2019). https://doi.org/10.1016/j.apm.2019.04.035
Brugnoli, A., Alazard, D., Pommier-Budinger, V., Matignon, D.: Port-Hamiltonian formulation and symplectic discretization of plate models Part II: Kirchhoff model for thin plates. Appl. Math. Model. 75, 961–981 (2019). https://doi.org/10.1016/j.apm.2019.04.036
Brugnoli, A., Cardoso-Ribeiro, F.L., Haine, G., Kotyczka, P.: Partitioned finite element method for power-preserving structured discretization with mixed boundary conditions. In: Proceedings of the 21st IFAC. World Congress, ??? (2020)
Cardoso-Ribeiro, F.L., Matignon, D., Lefèvre, L.: A structure-preserving Partitioned Finite Element Method for the 2D wave equation. IFAC-PapersOnLine 51(3), 119–124 (2018). https://doi.org/10.1016/j.ifacol.2018.06.033
Cardoso-Ribeiro, F.L., Matignon, D., Lefèvre, L.: A partitioned finite element method for power-preserving discretization of open systems of conservation laws. IMA J. Math. Control Inf. 38(2), 493–533 (2020). https://doi.org/10.1093/imamci/dnaa038
Cockburn, B., Gopalakrishnan, J., Lazarov, R.: Unified hybridization of discontinuous Galerkin, mixed, and continuous Galerkin methods for second order elliptic problems. SIAM J. Numer. Anal. 47(2), 1319–1365 (2009). https://doi.org/10.1137/070706616
Duck, F.: Tissue non-linearity. J. Eng. Med. 224(2), 155–170 (2010). https://doi.org/10.1243/09544119JEIM574
Duindam, V., Macchelli, A., Stramigioli, S., Bruyninckx, H.: Modeling and Control of Complex Physical Systems: The Port-Hamiltonian Approach (2009). https://doi.org/10.1007/978-3-642-03196-0
Eldred, C., Dubos, T., Kritsikis, E.: A quasi-Hamiltonian discretization of the thermal shallow water equations. J. Comput. Phys. 379, 1–31 (2019). https://doi.org/10.1016/j.jcp.2018.10.038
Gawthrop, P.J., Bevan, G.P.: Bond-graph modeling. IEEE Control Syst. Mag. 27(2), 24–45 (2007). https://doi.org/10.1109/MCS.2007.338279
Golo, G., Talasila, V., Van der Schaft, A., Maschke, B.: Hamiltonian discretization of boundary control systems. Automatica 40(5), 757–771 (2004). https://doi.org/10.1016/j.automatica.2003.12.017
Hairer, E., Lubich, C.: Symmetric multistep methods over long times. Numer. Math. 97(4), 699–723 (2004). https://doi.org/10.1007/s00211-004-0520-2
Hairer, E., Lubich, C., Wanner, G.: Geometric numerical integration illustrated by the Störmer-Verlet method. Acta Numer. 12, 399–450 (2003). https://doi.org/10.1017/S0962492902000144
Hairer, E., Lubich, C., Wanner, G.: Geometric Numerical Integration - Structure-Preserving Algorithms for Ordinary Differential Equations (2006). https://doi.org/10.1007/3-540-30666-8
Joly, P.: Variational methods for time-dependent wave propagation problems. In: Topics in Computational Wave Propagation, pp. 201–264 (2003)
Kotyczka, P.: Numerical Methods for Distributed Parameter Port-Hamiltonian Systems (2019). https://doi.org/10.14459/2019md1510230
Kotyczka, P., Lefèvre, L.: Discrete-time port-Hamiltonian systems: a definition based on symplectic integration. Syst. Control Lett. 133, 104530 (2018)
Kotyczka, P., Maschke, B., Lefèvre, L.: Weak form of Stokes-Dirac structures and geometric discretization of port-Hamiltonian systems. J. Comput. Phys. 361, 442–476 (2018). https://doi.org/10.1016/j.jcp.2018.02.006
Lindell, I., Sihvola, A.: General boundary conditions. Bound. Conditions Electromagn. 78(267), 101–141 (2019). https://doi.org/10.1002/9781119632429.ch5
Logg, A., Mardal, K.A., Wells, G.: Automated Solution of Differential Equations by the Finite Element Method: The FEniCS Book, vol. 84. Springer, ??? (2012). https://doi.org/10.1007/978-3-642-23099-8
McDonald, F., McLachlan, R.I., Moore, B.E., Quispel, G.R.: Travelling wave solutions of multisymplectic discretizations of semi-linear wave equations. J. Differ. Equ. Appl. 22(7), 913–940 (2016). https://doi.org/10.1080/10236198.2016.1162161
McLachlan, R.: Symplectic integration of Hamiltonian wave equations. Numer. Math. 66, 465–492 (1993). https://doi.org/10.1007/BF01385708
McLachlan, R.I., Stern, A.: Multisymplecticity of hybridizable discontinuous Galerkin methods. Found. Comput. Math. 20(1), 35–69 (2020). https://doi.org/10.1007/s10208-019-09415-1
Nitsche, J.: Über ein Variationsprinzip zur Lösung von Dirichlet-Problemen bei Verwendung von Teilräumen, die keinen Randbedingungen unterworfen sind. In: Abhandlungen aus dem Mathematischen Seminar der Universität Hamburg, vol. 36, pp. 9–15 (1971). https://doi.org/10.1007/BF02995904
Ophir, J., Céspedes, I., Ponnekanti, H., Yazdi, Y., Li, X.: Elastography: a quantitative method for imaging the elasticity of biological tissues. Ultrason. Imag. 13(2), 111–134 (1991). https://doi.org/10.1177/016173469101300201
Polyanin, A.D.: Handbook of Linear Partial Differential Equations for Engineers and Scientists, vol. 40 (2002). https://doi.org/10.5860/choice.40-0964
Raviart, P.A., Thomas, J.M.: A mixed finite element method for 2nd order elliptic problems. In: Mathematical Aspects of Finite Element Methods, pp. 292–315. Springer, Berlin (1977). https://doi.org/10.1007/bfb0064470
Reich, S.: Multi-symplectic Runge-Kutta collocation methods for Hamiltonian wave equations. J. Comput. Phys. 157(2), 473–499 (2000). https://doi.org/10.1006/jcph.1999.6372
Sadjina, S., Kyllingstad, L.T., Skjong, S., Pedersen, E.: Energy conservation and power bonds in co-simulations: non-iterative adaptive step size control and error estimation. Eng. Comput. 33(3), 607–620 (2017). https://doi.org/10.1007/s00366-016-0492-8
Sánchez, M.A., Ciuca, C., Nguyen, N.C., Peraire, J., Cockburn, B.: Symplectic Hamiltonian HDG methods for wave propagation phenomena. J. Comput. Phys. 350, 951–973 (2017). https://doi.org/10.1016/j.jcp.2017.09.010
Scovazzi, G., Carnes, B.: Weak boundary conditions for wave propagation problems in confined domains: formulation and implementation using a variational multiscale method. Comput. Methods Appl. Mech. Eng. 221, 117–131 (2012). https://doi.org/10.1016/j.cma.2012.01.018
Serhani, A., Matignon, D., Haine, G.: Partitioned finite element method for port-Hamiltonian systems with boundary damping: anisotropic heterogeneous 2D wave equations. IFAC-PapersOnLine 52, 96–101 (2019). https://doi.org/10.1016/j.ifacol.2019.08.017
Süli, E., Mayers, D.F.: An Introduction to Numerical Analysis (2003)
Trenchant, V., Fares, Y., Ramirez, H., Gorrec, Y.L., Ouisse, M.: A port-Hamiltonian formulation of a 2D boundary controlled acoustic system. IFAC-PapersOnLine 28(13), 235–240 (2015). https://doi.org/10.1016/j.ifacol.2015.10.245
Trenchant, V., Ramirez, H., Le Gorrec, Y., Kotyczka, P.: Structure preserving spatial discretization of 2D hyperbolic systems using staggered grids finite difference. In: Proceedings of the American Control Conference, pp. 2491–2496 (2017). https://doi.org/10.23919/ACC.2017.7963327
Van Der Schaft, A., Jeltsema, D.: In: Port-Hamiltonian Systems Theory: An Introductory Overview, pp. 2–3 (2014). https://doi.org/10.1561/2600000002
Van Der Schaft, A.J., Maschke, B.M.: Hamiltonian formulation of distributed-parameter systems with boundary energy flow. J. Geom. Phys. 42(1–2), 166–194 (2002). https://doi.org/10.1016/S0393-0440(01)00083-3
Vu, N.M.T., Lefèvre, L., Nouailletas, R., Brémond, S.: Symplectic spatial integration schemes for systems of balance equations. J. Process Control 51, 1–17 (2017). https://doi.org/10.1016/j.jprocont.2016.12.005
Zhai, Z., Chen, Q.: Solution characters of iterative coupling between energy simulation and CFD programs. Energy Build. 35(5), 493–505 (2003). https://doi.org/10.1016/S0378-7788(02)00156-1