The theory of ion transport through membrane channels

Progress in Biophysics and Molecular Biology - Tập 46 - Trang 51-96 - 1985
Kim Cooper1, Eric Jakobsson2, Peter Wolynes3
1Department of Physiology, Rush Medical College, Chicago, Illinois, U.S.A.
2Department of Physiology and Biophysics, University of Illinois, Urbana, Illinois, U.S.A.
3Department of Chemistry, University of Illinois, Urbana, Illinois, U.S.A.

Tài liệu tham khảo

Adams, 1980, The permeability of endplate channels to monovalent and divalent metal cations, J. gen. Physiol., 75, 493, 10.1085/jgp.75.5.493 Andersen, 1983, Ion movement through Gramicidin A channels: single-channel measurements at very high potentials, Biophys. J., 41, 119, 10.1016/S0006-3495(83)84414-2 Andersen, 1983, Ion movement through Gramicidin A channels: interfacial polarization effects on single-channel current measurements, Biophys. J., 41, 135, 10.1016/S0006-3495(83)84415-4 Andersen, 1975, Potential energy barriers to ion transport within lipid bilayers, Biophys. J., 15, 795, 10.1016/S0006-3495(75)85856-5 Brahm, 1977, Temperature-dependent changes of chloride transport kinetics in human red cells, J. gen. Physiol., 70, 283, 10.1085/jgp.70.3.283 Chandrasekhar, 1943, Stochastic problems in physics and astronomy, Rev. mod. Phys., 15, 1, 10.1103/RevModPhys.15.1 Coronado, 1980, Ionic selectivity, saturation, and block in a K+-selective channel from sarcoplasmic reticulum, J. gen. Physiol., 76, 425, 10.1085/jgp.76.4.425 d'Agliano, 1973, Reaction kinetics at solid surfaces, Vol. XXIV, 200 Dani, 1981, Water transport and ion water interaction in the Gramicidin channel, Biophys. J., 35, 501, 10.1016/S0006-3495(81)84805-9 deLevie, 1972, Transport of ions of one kind through thin membranes. I. General and equilibrium considerations, J. memb. Biol., 9, 241, 10.1007/BF01868055 deLevie, 1972, Transport of ions of one kind through thin membranes. II. Nonequilibrium steady-state behavior, J. memb. Biol., 10, 171, 10.1007/BF01867852 Dwyer, 1980, The permeability of the end plate channel to organic cations in frog muscle, J. gen. Physiol., 75, 469, 10.1085/jgp.75.5.469 Einstein, 1926 Eisenberg, 1979 Ermak, 1975, A computer simulation of charged particles in solution. I. Technique and equilibrium properties, J. chem. Phys., 62, 4189, 10.1063/1.430300 Ermak, 1975, A computer simulation of charged particles in solution. II. Polyion diffusion coefficient, J. chem. Phys., 62, 4197, 10.1063/1.430301 Ermak, 1980, Numerical integration of the Langevin equation: Monte Carlo Simulation, J. comp. Physics, 35, 169, 10.1016/0021-9991(80)90084-4 Ermak, 1974, Equilibrium electrostatic effects on the behavior of polyions in solution: polyion-mobile ion interaction, Chem. Phys. Lett, 24, 243, 10.1016/0009-2614(74)85442-4 Eyring, 1936, Viscosity, plasticity, and diffusion as examples of absolute reaction rates, J. chem. Phys., 4, 283, 10.1063/1.1749836 Eyring, 1982 Eyring, 1969 Eyring, 1931, Uber einfache Gasreaktionen, Z. Phys. Chem., 12, 279 Finkelstein, 1981, The Gramicidin A channel: a review of its permeability characteristics with special reference to the single-file aspect of transport, J. memb. Biol., 59, 155, 10.1007/BF01875422 Fischer, 1981, Molecular dynamics study of ion transport in transmembrane protein channels, Biophys. Chem., 13, 105, 10.1016/0301-4622(81)80009-9 Frankenhaeuser, 1960, Sodium permeability in toad and in squid nerve, J. Physiol., 152, 159, 10.1113/jphysiol.1960.sp006477 Frehland, 1979, Theory of single-file noise, BBA, 553, 326, 10.1016/0005-2736(79)90236-0 Gates, 1984, Brownian dynamic simulation of ion movement through channels, Biophys. J., 45, 64a Ginsburg, 1976, Use of current-voltage diagrams in locating peak energy barriers in cell membranes, J. memb. Biol., 29, 10.1007/BF01868962 Glasstone, 1941 Hall, 1973, A barrier model for current flow in lipid bilayer membranes, J. memb. Biol., 11, 75, 10.1007/BF01869814 Hladby, 1974, The energy barriers to ion transport by nonactin across thin lipid membranes, Biochim. Biophys. Acta, 352, 71, 10.1016/0005-2736(74)90180-1 Hill, 1977 Hill, 1971, Cooperative effects in models of steady-state transport across membranes. IV. One-site, two-site and multi-site models, Biophys. J., 11, 685, 10.1016/S0006-3495(71)86248-3 Hille, 1975, Ionic selectivity, saturation, and block in sodium channels: a four-barrier model, J. gen. Physiol., 66, 535, 10.1085/jgp.66.5.535 Hille, 1977, Ionic basis of resting and action potentials, Handbook of Physiol., 99 Hille, 1982, Membrane excitability: action potential and ionic channels, Vol. IV Hille, 1984 Hille, 1978, Potassium channels as multi-ion single-file pores, J. gen. Physiol., 72, 409, 10.1085/jgp.72.4.409 Jordan, 1981, Energy barriers for passage of ions through channels. Exact solution of two electrostatics problems, Biophys. Chem., 13, 203, 10.1016/0301-4622(81)80002-6 Jordan, 1979, Kinetics of transport of hydrophobic ions through lipid membranes inducing diffusion polarization in the aqueous phase, Biophys. Chem., 10, 273, 10.1016/0301-4622(79)85016-4 Karplus, 1983, Dynamics of proteins, elements and function, Ann. Rev. Biochem., 53, 263, 10.1146/annurev.bi.52.070183.001403 Kistler, 1982, Structure and function of an acetylcholine receptor, Biophys. J., 37, 371, 10.1016/S0006-3495(82)84685-7 Katz, 1949, Les constantes electrique de la membrane du muscle, Arch. sci. Physiol., 3, 285 Labarca, 1981, A K+-selective, three-state channel from fragmented sarcoplasmic reticulum of frog leg muscle, J. memb. Biol., 61, 31, 10.1007/BF01870750 Lauger, 1973, Ion transport through pores: a rate-theory analysis, BBA, 311, 423, 10.1016/0005-2736(73)90323-4 Lauger, 1975, Shot noise in ion channels, BBA, 413, 1, 10.1016/0005-2736(75)90053-X Lauger, 1978, Transport noise in membranes: current and voltage fluctuations at equilibrium, BBA, 507, 337, 10.1016/0005-2736(78)90427-3 Lauger, 1982, Microscopic calculation of ion-transport rates in membrane channels, Biophys. Chem., 15, 89, 10.1016/0301-4622(82)80021-5 Lauger, 1982, Jumping frequencies in membrane channels: comparison between stochastic molecular dynamics simulation and rate theory, Biophys. Chem., 16, 209, 10.1016/0301-4622(82)87004-X Lauger, 1973, Theoretical Analysis of Ion Conductance in Lipid Bilayer Membranes, Vol. 2 Lauger, 1980, Fluctuations of barrier structure in ionic channels, BBA, 602, 167, 10.1016/0005-2736(80)90299-0 Lecar, 1981, Single-channel conductances and models of transport, 109 Levitt, 1973, Kinetics of diffusion and convection in 3.2 Å pores: exact solution by computer simulation, Biophys. J., 13, 186, 10.1016/S0006-3495(73)85979-X Levitt, 1978, Electrostatic calculations for an ion channel. I. Energy and potential profiles and interactions between ions, Biophys. J., 22, 209, 10.1016/S0006-3495(78)85485-X Levitt, 1978, Electrostatic calculations for an ion channel. II. Kinetic behavior of the Gramacidin A channel, Biophys. J., 22, 221, 10.1016/S0006-3495(78)85486-1 Levitt, 1982, Comparison of Nernst-Planck and Reaction-Rate models for multiply occupied channels, Biophys. J., 37, 575, 10.1016/S0006-3495(21)00377-5 Levitt, 1974, A new theory of transport for cell membrane pores. II. Exact results and computer simulation (molecular dynamics), BBA, 373, 132, 10.1016/0005-2736(74)90112-6 Lewis, 1979, Mechanism of ion permeation through channels in a postsynaptic membrane, Vol. 3, 133 Mackay, 1984, Structure and dynamics of ion transport through Gramicidin-A, Biophys. J., 10.1016/S0006-3495(84)84016-3 McCamman, 1980, Simulation of protein dynamics, Ann. Rev. phys. Chem., 31, 29, 10.1146/annurev.pc.31.100180.000333 McConnel, 1980 McQuarrie, 1976 Montroll, 1958, The application of the theory of stochastic processes to chemical kinetics, Adv. chem. Phys., 1, 361 Myers, 1972, Ion transfer across lipid membranes in the presence of Gramicidin A. II. The ion selectivity, BBA, 274, 313, 10.1016/0005-2736(72)90179-4 Nernst, 1888, Zur kinetik der in losung befindlichen korper, Z. Physik Chemie, 2, 613, 10.1515/zpch-1888-0174 Oosting, 1979, Signal transmission in the nervous system, Rep. Prog. Phys., 42, 1481, 10.1088/0034-4885/42/9/001 Pedley, 1983, Calculation of unstirred layer thickness in membrane transport experiments: a survey, Q. Rev. Biophys., 16, 115, 10.1017/S0033583500005060 Planck, 1890, I. Ueber die erregung von electricitat und warme in electrolyten, Ann. Phys. u. Chem., 39, 161, 10.1002/andp.18902750202 Reif, 1965 Royer, 1982 Simon, 1969, A computer simulation of the unwinding of a DNA-like helix, J. stat. Phys., 1, 41, 10.1007/BF01007240 Takeuchi, 1977, Junctional transmission. I. Postsynaptic mechanisms, Vol. 1, 295 Uhlenbeck, 1930, On the theory of the Brownian motion, Phys. Rev., 36, 823, 10.1103/PhysRev.36.823 Urban, 1979, Ion transport in the simplest single file pore, BBA, 554, 410, 10.1016/0005-2736(79)90381-X Urry, 1980, The Malonyl Gramicidin channel: NMR-derived rate constants and comparison of calculated and experimental single-channel currents, J. memb. Biol., 55, 29, 10.1007/BF01926368 van Kampen, 1982 Welch, 1982, The role of protein fluctuations in enzyme action: a review, Prog. Biophys. molec. Biol., 39, 109, 10.1016/0079-6107(83)90015-9