The seed biochemical signature as a potent marker for water logging tolerance in maize

Alscher, 2002, Role of superoxide dismutases (SODs) in controlling oxidative stress in plants, J. Exp. Bot., 53, 1331, 10.1093/jexbot/53.372.1331 Argandona, 1991, Water stress on proline content and enzyme activities in barley seedlings, Phytochemistry, 30, 1093, 10.1016/S0031-9422(00)95178-1 Aschi-Smiti, 2003, Assessment of enzyme induction and aerenchyma formation as mechanisms for flooding tolerance in Trifolium subterraneum ‘Park, Ann. Bot., 91, 195, 10.1093/aob/mcf022 Asha, 2021, Response of morphological and biochemical traits of maize genotypes under waterlogging stress, J. Phytol., 13, 0108, 10.25081/jp.2021.v13.7081 Bates, 1973, Rapid determination of free proline for water-stress studies, Plant Soil, 39, 205, 10.1007/BF00018060 Chance, 1955, Assay of catalases and peroxidases, Methods Enzymol., 2, 764, 10.1016/S0076-6879(55)02300-8 Chugh, 2012, Response of antioxidative and ethanolic fermentation enzymes in maize seedlings of tolerant and sensitive genotypes under short term waterlogging, Indian J. Exp. Biol., 50, 577 Chugh, 2011, Role of antioxidant and anaerobic metabolism enzymes in providing tolerance to maize (Zea mays L.) seedlings against waterlogging, Indian J. Biochem. Biophys., 48, 346 Copeland, 1985, Hexose kinases from the plant cytosolic fraction of soybean nodules, Plant Physiol., 79, 114, 10.1104/pp.79.1.114 Dai, 2022, Selenate increased plant growth and arsenic uptake in As-hyperaccumulator Pteris vittata via glutathione-enhanced arsenic reduction and translocation, J. Hazard. Mater., 424, 10.1016/j.jhazmat.2021.127581 Dey, 1985, Changes in the forms of invertase during germination of mung bean seeds, Phytochemistry, 25, 51, 10.1016/S0031-9422(00)94499-6 Dikilitas, 2020, Role of proline and glycine betaine in overcoming abiotic stresses, 1 Doria, 2009, Phytic acid prevents oxidative stress in seeds: evidence from a maize (Zea mays L.) low phytic acid mutant, J. Exp. Bot., 60, 967, 10.1093/jxb/ern345 Dubois, 1956, Colorimetric method for determination of sugars and related substances, Anal. Chem., 28, 350, 10.1021/ac60111a017 Duhan, 2020, Mechanism of waterlogging stress tolerance in pigeonpea plants: biochemical and anatomical adaptation under waterlogging, 89 El Moukhtari, 2020, How does proline treatment promote salt stress tolerance during crop plant development?, Front. Plant Sci., 11, 1127, 10.3389/fpls.2020.01127 Ellis, 1999, Arabidopsis roots and shoots have different mechanisms for hypoxic stress tolerance, Plant Physiol., 119, 57, 10.1104/pp.119.1.57 Esterbauer, 1978, Seasonal variation of glutathione and glutathione reductase in needles of Picea abies, Plant Physiol., 61, 119, 10.1104/pp.61.1.119 Ghosh, 2021, Proline, a multifaceted signalling molecule in plant responses to abiotic stress: understanding the physiological mechanisms, Plant Biol. Gibbs, 2003, Mechanisms of anoxia tolerance in plants. I. Growth, survival and anaerobic catabolism, Funct. Plant Biol., 30, 1, 10.1071/PP98095 Goyal, 2020, Foliar treatment of potassium nitrate modulates the fermentative and sucrose metabolizing pathways in contrasting maize genotypes under water logging stress, Physiol. Mol. Biol. Plants, 26, 899, 10.1007/s12298-020-00779-1 Graf, 1987, Phytic acid. A natural antioxidant, J. Biol. Chem., 262, 11647, 10.1016/S0021-9258(18)60858-0 Gupta, 2005, Sugar signalling and gene expression in relation to carbohydrate metabolism under abiotic stresses in plants, J. Biosci., 30, 761, 10.1007/BF02703574 Hartman, 2021, The role of ethylene in metabolic acclimations to low oxygen, New Phytol., 229, 64, 10.1111/nph.16378 Huang, 2003, Responses by coleoptiles of intact rice seedlings to anoxia: K+ net uptake from the external solution and translocation from the caryopses, Ann. Bot., 91, 271, 10.1093/aob/mcf122 Kaur, 2020, Management practices to reduce crop production and nitrogen losses from waterlogging, Crops Soils, 53, 33, 10.1002/crso.20053 Kaur, 2021, Elucidating the morpho-physiological adaptations and molecular responses under long-term waterlogging stress in maize through gene expression analysis, Plant Sci., 304, 10.1016/j.plantsci.2021.110823 Kaur, 2009, Differential response of the antioxidant system in wild and cultivated genotypes of chickpea, Plant Growth Regul., 57, 109, 10.1007/s10725-008-9332-1 Jackson,, 2003, Physiology, Biochemistry and Molecular Biology of Plant Root Systems Subjected to Flooding of the Soil, 193 Kaur, 2021, Timing and intensity of upregulated defensive enzymes is a key factor determining resistance in chickpea to Ascochyta rabiei, Physiol. Mol. Plant Pathol., 114, 10.1016/j.pmpp.2021.101645 Ke, 1994, Ethanolic fermentation of Bartlett'pears as influenced by ripening stage and atmospheric composition, J. Am. Soc. Hortic. Sci., 119, 976, 10.21273/JASHS.119.5.976 Kerr, 1987, Resolution of two molecular forms of sucrose-phosphate synthase from maize, soybean and spinach leaves, Planta, 170, 515, 10.1007/BF00402985 Khan, 2020, Role of sugars, amino acids and organic acids in improving plant abiotic stress tolerance, Pak. J. Bot., 52, 355, 10.30848/PJB2020-2(24) Klok, 2002, Expression profile analysis of the low-oxygen response in Arabidopsis root cultures, Plant Cell, 14, 2481, 10.1105/tpc.004747 Krishnan, 1985, Wheat invertases: characterization of cell wall-bound and soluble forms, Plant Physiol., 78, 241, 10.1104/pp.78.2.241 Kumar, 2021, Phytic acid: Blessing in disguise, a prime compound required for both plant and human nutrition, Food Res. Int., 142, 10.1016/j.foodres.2021.110193 Kumutha, 2008, Role of root carbohydrate reserves and their mobilization in imparting waterlogging tolerance in green gram (Vigna radiata (L.) Wilczek) genotypes, Indian J. Plant Physiol., 13, 339 Kursteiner, 2003, The pyruvate decarboxylase1 gene of Arabidopsis is required during anoxia but not other environmental stresses, Plant Physiol., 132, 968, 10.1104/pp.102.016907 Langston, 1985, Puruvate decarboxylase from Zea mays L, Plant Physiol., 79, 436, 10.1104/pp.79.2.436 Lee, 2007, Simultaneous overexpression of both CuZn superoxide dismutase and ascorbate peroxidase in transgenic tall fescue plants confers increased tolerance to a wide range of abiotic stresses, J. Plant Physiol., 164, 1626, 10.1016/j.jplph.2007.01.003 Leipner, 1999, Effect of growing season on the photosynthetic apparatus and leaf antioxidative defenses in two maize genotypes of different chilling tolerance, Environ. Exp. Bot., 42, 129, 10.1016/S0098-8472(99)00026-X Li, 2011, Generation and scavenging of reactive oxygen species in wheat flag leaves under combined shading and waterlogging stress, Funct. Plant Biol., 39, 71, 10.1071/FP11165 Li, 2021, Physiological responses of two contrasting kiwifruit (Actinidia spp.) Rootstocks against waterlogging stress, Plants, 10, 2586, 10.3390/plants10122586 Liang, 2013, Proline mechanisms of stress survival, Antioxid. Redox Signaling, 19, 998, 10.1089/ars.2012.5074 Liu, 2022, Transcription factors AcERF74/75 respond to waterlogging stress and trigger alcoholic fermentation-related genes in kiwifruit, Plant Sci., 314, 10.1016/j.plantsci.2021.111115 Liu, 2001, Mitochondrial aldehyde dehydrogenase activity is required for male fertility in maize, Plant Cell, 13, 1063, 10.1105/tpc.13.5.1063 Liu, 2007, Glucose-6-phosphate dehydrogenase plays a pivotal role in nitric oxide-involved defense against oxidative stress under salt stress in red kidney bean roots, Plant Cell Physiol., 48, 511, 10.1093/pcp/pcm020 Lone, 2018, Breeding strategies for improving growth and yield under waterlogging conditions in maize: a review, Maydica, 61, 1 Loreti, 2001, Why and how do plant cells sense sugars?, Ann. Bot., 88, 803, 10.1006/anbo.2001.1526 Loreti, 2020, The many facets of hypoxia in plants, Plants, 9, 745, 10.3390/plants9060745 Loreti, 2003, Sugar modulation of α-amylase genes under anoxia, Ann. Bot., 91, 143, 10.1093/aob/mcf117 Lowry, 1951, Protein measurement with the Folin phenol reagent, J. Biol. Chem., 193, 265, 10.1016/S0021-9258(19)52451-6 Mahmood, 2021, Morpho-physio-biochemical and molecular responses of maize hybrids to salinity and waterlogging during stress and recovery phase, Plants, 10, 1345, 10.3390/plants10071345 Marklund, 1974, Involvement of the superoxide anion radical in the autoxidation of pyrogallol and a convenient assay for superoxide dismutase, Eur. J. Biochem., 47, 469, 10.1111/j.1432-1033.1974.tb03714.x Mignolli, 2021, Root submergence enhances respiration and sugar accumulation in the stem of flooded tomato plants, Plant Cell Environ., 44, 3643, 10.1111/pce.14152 Nakano, 1987, Purification of ascorbate peroxidase in spinach chloroplasts; its inactivation in ascorbate-depleted medium and reactivation by monodehydroascorbate radical, Plant Cell Physiol., 28, 131 Nelson, 1944, A photometric adaptation of the Somogyi method for the determination of glucose, J. Biol. Chem., 153, 375, 10.1016/S0021-9258(18)71980-7 Noctor, 1998, Ascorbate and glutathione: keeping active oxygen under control, Annu. Rev. Plant Biol., 49, 249, 10.1146/annurev.arplant.49.1.249 Oˆba, 1982, [84]Pyruvate decarboxylase from sweet potato roots, Methods Enzymol., 90, 528, 10.1016/S0076-6879(82)90180-X Perata, 1998, Carbohydrate metabolism and anoxia tolerance in cereal grains, Acta Bot. Neerlandica, 47, 269 Perata, 1997, Sugar repression of a gibberellin-dependent signaling pathway in barley embryos, Plant Cell, 9, 2197, 10.2307/3870579 Raboy, 2002, Progress in breeding low phytate crops, J. Nutr., 132, 503S, 10.1093/jn/132.3.503S Rajjou, 2008, Seed longevity: survival and maintenance of high germination ability of dry seeds, C.R. Biol., 331, 796, 10.1016/j.crvi.2008.07.021 Ram, 2002, Submergence tolerance in rainfed lowland rice: physiological basis and prospects for cultivar improvement through marker-aided breeding, Field Crops Res., 76, 131, 10.1016/S0378-4290(02)00035-7 Ricard, 1998, Evidence for the critical role of sucrose synthase for anoxic tolerance of maize roots using a double mutant, Plant Physiol., 116, 1323, 10.1104/pp.116.4.1323 Rouser, 1970, Two dimensional thin layer chromatographic separation of polar lipids and determination of phospholipids by phosphorus analysis of spots, Lipids, 5, 494, 10.1007/BF02531316 Santiago, 2021, Contrasting anther glucose-6-phosphate dehydrogenase activities between two bean varieties suggest an important role in reproductive heat tolerance, Plant Cell Environ., 44, 2185, 10.1111/pce.14057 Sasidharan, 2021, Plant performance and food security in a wetter world, New Phytol., 229, 5, 10.1111/nph.17067 Shiao, 2002, Overexpression of alcohol dehydrogenase or pyruvate decarboxylase improves growth of hairy roots at reduced oxygen concentrations, Biotechnol. Bioeng., 77, 455, 10.1002/bit.10147 Shigeoka, 2002, Regulation and function of ascorbate peroxidase isoenzymes, J. Exp. Bot., 53, 1305, 10.1093/jexbot/53.372.1305 Sinha, 1972, Colorimetric assay of catalase, Anal. Biochem., 47, 389, 10.1016/0003-2697(72)90132-7 Skibbe, 2002, Characterization of the aldehyde dehydrogenase gene families of Zea mays and Arabidopsis, Plant Mol. Biol., 48, 751, 10.1023/A:1014870429630 Smith, 1985, The regulation of the biosynthesis of glutathione in leaves of barley (Hordeum vulgare L.), Plant Sci., 41, 11, 10.1016/0168-9452(85)90059-7 Subbaiah, 2003, Molecular and cellular adaptations of maize to flooding stress, Ann. Bot., 91, 119, 10.1093/aob/mcf210 Sunkar, 2003, Overexpression of a stress-inducible aldehyde dehydrogenase gene from Arabidopsis thaliana in transgenic plants improves stress tolerance, Plant J., 35, 452, 10.1046/j.1365-313X.2003.01819.x Taji, 2002, Important roles of drought-and cold-inducible genes for galactinol synthase in stress tolerance in Arabidopsis thaliana, Plant J., 29, 417, 10.1046/j.0960-7412.2001.01227.x Ventura, 2020, Arabidopsis phenotyping reveals the importance of alcohol dehydrogenase and pyruvate decarboxylase for aerobic plant growth, Sci. Rep., 10, 1, 10.1038/s41598-020-73704-x Wang, 2008, Involvement of glucose-6-phosphate dehydrogenase in reduced glutathione maintenance and hydrogen peroxide signal under salt stress, Plant Signaling Behav., 3, 394, 10.4161/psb.3.6.5404 Waters, 1991, Effects of anoxia on wheat seedlings: II. Influence of O2 supply prior to anoxia on tolerance to anoxia, alcoholic fermentation, and sugar levels, J. Exp. Bot., 42, 1437, 10.1093/jxb/42.11.1437 Yao, 2021, Crucial waterlogging-responsive genes and pathways revealed by comparative physiology and transcriptome in tropical and temperate maize (Zea mays L.) inbred lines, J. Plant Biol., 64, 1, 10.1007/s12374-021-09298-2 Yuan, 1987, Changing activity of glucose-6-phosphate dehydrogenase from pea chloroplasts during photosynthetic induction, Plant Physiol., 85, 598, 10.1104/pp.85.2.598 Zemel, 1982, Phytic acid hydrolysis and soluble zinc and iron in whole wheat bread as affected by calcium containing additives, J. Food Sci., 47, 535, 10.1111/j.1365-2621.1982.tb10118.x Zeng, 1999, Rapid repression of maize invertases by low oxygen. Invertase/sucrose synthase balance, sugar signaling potential, and seedling survival, Plant Physiol., 121, 599, 10.1104/pp.121.2.599 Zhou, 2020, Plant waterlogging/flooding stress responses: from seed germination to maturation, Plant Physiol. Biochem., 148, 228, 10.1016/j.plaphy.2020.01.020