The role of Synechococcus in vertical flux in the Costa Rica upwelling dome

Progress in Oceanography - Tập 112 - Trang 49-59 - 2013
Michael R. Stukel1, Moira Décima1, Karen E. Selph2, Darcy A.A. Taniguchi1, Michael R. Landry1
1Scripps Institution of Oceanography, University of California at San Diego, La Jolla, CA, United States
2Department of Oceanography, University of Hawaii at Manoa, Honolulu, HI 96822, United States

Tài liệu tham khảo

Amacher, 2009, Molecular approach to determine contributions of the protist community to particle flux, Deep-Sea Research I, 56, 2206, 10.1016/j.dsr.2009.08.007 Brown, 1999, Picophytoplankton dynamics and production in the Arabian Sea during the 1995 Southwest Monsoon, Deep-Sea Research II, 46, 1745, 10.1016/S0967-0645(99)00042-9 Buesseler, 1998, The decoupling of production and particulate export in the surface ocean, Global Biogeochemical Cycles, 12, 297, 10.1029/97GB03366 Buesseler, 2008, VERTIGO (VERtical Transport in the Global Ocean): a study of particle sources and flux attenuation in the North Pacific, Deep-Sea Research II, 55, 1522, 10.1016/j.dsr2.2008.04.024 Calbet, 1999, Mesozooplankton influences on the microbial food web: direct and indirect trophic interactions in the oligotrophic open ocean, Limnology and Oceanography, 44, 1370, 10.4319/lo.1999.44.6.1370 Caron, 1991, Grazing and utilization of chroococcoid cyanobacteria and heterotrophic bacteria by protozoa in laboratory cultures and a coastal plankton community, Marine Ecology Progress Series, 76, 205, 10.3354/meps076205 Christaki, 2001, Nanoflagellate predation on auto- and heterotrophic picoplankton in the oligotrophic Mediterranean Sea, Journal of Plankton Research, 23, 1297, 10.1093/plankt/23.11.1297 Conover, 1966, Assimilation of organic matter by zooplankton, Limnology and Oceanography, 11, 338, 10.4319/lo.1966.11.3.0338 Conover, 1986, Probable loss of chlorophyll-derived pigments during passage through the gut of zooplankton, and some of the consequences, Limnology and Oceanography, 31, 878, 10.4319/lo.1986.31.4.0878 Dagg, 1987, Ingestion, gut passage, and egestion by the copepod Neocalanus plumchrus in the laboratory and in the Subarctic Pacific Ocean, Limnology and Oceanography, 32, 178, 10.4319/lo.1987.32.1.0178 Décima, M., Landry, M.R., Rykaczewski, R.R., 2011. Broad-scale patterns in mesozooplankton biomass and grazing in the eastern equatorial Pacific. Deep-Sea Research II. Dore, 2002, Seasonal and interannual variability in sources of nitrogen supporting export in the oligotrophic subtropical North Pacific Ocean, Limnology and Oceanography, 47, 1595, 10.4319/lo.2002.47.6.1595 Downs, 1985, Carbon: pheopigment ratios of zooplankton fecal pellets as an index of herbivorous feeding, Limnology and Oceanography, 30, 1024, 10.4319/lo.1985.30.5.1024 Durbin, 2007, Reassessment of the gut pigment method for estimating in situ zooplankton ingestion, Marine Ecology Progress Series, 331, 305, 10.3354/meps331305 Fiedler, 2002, The annual cycle and biological effects of the Costa Rica Dome, Deep-Sea Research I, 49, 321, 10.1016/S0967-0637(01)00057-7 Frias-Lopez, 2009, Use of stable isotope-labelled cells to identify active grazers of picocyanobacteria in ocean surface waters, Environmental Microbiology, 11, 512, 10.1111/j.1462-2920.2008.01793.x Garrison, 2000, Microbial food web structure in the Arabian Sea: a US JGOFS study, Deep-Sea Research II, 47, 1387, 10.1016/S0967-0645(99)00148-4 Goericke, 2000, Distribution and sources of cyclic pheophorbides in the marine environment, Limnology and Oceanography, 45, 200, 10.4319/lo.2000.45.1.0200 Gorsky, 1999, Picoplankton and nanoplankton aggregation by appendicularians: fecal pellet contents of Megalocercus huxleyi in the equatorial Pacific, Journal of Geophysical Research – Oceans, 104, 3381, 10.1029/98JC01850 Hirose, 2008, Growth and grazing mortality rates of Prochlorococcus, Synechococcus and eukaryotic picophytoplankton in a bay of the Uwa Sea, Japan, Journal of Plankton Research, 30, 241, 10.1093/plankt/fbm101 Jeong, 2005, Feeding by red-tide dinoflagellates on the cyanobacterium Synechococcus, Aquatic Microbial Ecology, 41, 131, 10.3354/ame041131 Johnson, 1982, The utilization of chroococcoid cyanobacteria by marine protozooplankters but not by calanoid copepods, Annales De L Institut Oceanographique, 58, 297 Kleppel, 1984, Phytoplankton pigments in the gut contents of planktonic copepods from coastal waters off southern California, Marine Biology, 78, 193, 10.1007/BF00394700 Knauer, 1979, Fluxes of particulate carbon, nitrogen, and phosphorus in the upper water column of the Northeast Pacific, Deep-Sea Research, 26, 97, 10.1016/0198-0149(79)90089-X Lamborg, 2008, The flux of bio- and lithogenic material associated with sinking particles in the mesopelagic “twilight zone” of the northwest and North Central Pacific Ocean, Deep-Sea Research II, 55, 1540, 10.1016/j.dsr2.2008.04.011 Landry, 2008, Depth-stratified phytoplankton dynamics in Cyclone Opal, a subtropical mesoscale eddy, Deep-Sea Research II, 55, 1348, 10.1016/j.dsr2.2008.02.001 Landry, 1984, Dynamics of microbial plankton communities: experiments in Kaneohe Bay, Hawaii, Marine Ecology Progress Series, 16, 127, 10.3354/meps016127 Landry, 2009, Lagrangian studies of phytoplankton growth and grazing relationships in a coastal upwelling ecosystem off Southern California, Progress in Oceanography, 83, 208, 10.1016/j.pocean.2009.07.026 Landry, 2011, Phytoplankton growth, grazing and production balances in the HNLC equatorial Pacific, Deep-Sea Research II, 58, 524, 10.1016/j.dsr2.2010.08.011 Latasa, 1997, Pigment-specific growth and grazing rates of phytoplankton in the central equatorial Pacific, Limnology and Oceanography, 42, 289, 10.4319/lo.1997.42.2.0289 Li, 1983, Autotrophic picoplankton in the tropical ocean, Science, 219, 292, 10.1126/science.219.4582.292 Liu, 2002, Phytoplankton growth, and microzooplankton grazing in the subarctic Pacific Ocean and the Bering Sea during summer 1999, Deep-Sea Research I, 49, 363, 10.1016/S0967-0637(01)00056-5 Lochte, 1988, Bacteria and cyanobacteria associated with phytodetritus in the deep sea, Nature, 333, 67, 10.1038/333067a0 Lomas, 2011, Evidence for aggregation and export of cyanobacteria and nano-eukaryotes from the Sargasso Sea euphotic zone, Biogeosciences, 8, 203, 10.5194/bg-8-203-2011 Menden-Deuer, 2000, Carbon to volume relationships for dinoflagellates, diatoms, and other protist plankton, Limnology and Oceanography, 45, 569, 10.4319/lo.2000.45.3.0569 Michaels, 1988, Primary production, sinking fluxes and the microbial food web, Deep-Sea Research, 35, 473, 10.1016/0198-0149(88)90126-4 Monger, 1993, Flow cytometric analysis of marine bacteria with Hoechst 33342, Applied and Environmental Microbiology, 59, 905, 10.1128/AEM.59.3.905-911.1993 Penry, 1991, Chlorophyl a degradation by Calanus pacificus: dependence on ingestion rate and digestive acclimation to food resources, Limnology and Oceanography, 36, 147, 10.4319/lo.1991.36.1.0147 Pfannkuche, 1993, Open ocean pelago-benthic coupling: cyanobacteria as tracers of sedimenting salp feces, Deep-Sea Research I, 40, 727, 10.1016/0967-0637(93)90068-E Poulton, 2006, Phytoplankton carbon fixation, chlorophyll-biomass and diagnostic pigments in the Atlantic Ocean, Deep-Sea Research II, 53, 1593, 10.1016/j.dsr2.2006.05.007 Richardson, 2007, Small phytoplankton and carbon export from the surface ocean, Science, 315, 838, 10.1126/science.1133471 Rodier, 1997, Export flux of particles at the equator in the western and central Pacific Ocean, Deep-Sea Research II, 44, 2085, 10.1016/S0967-0645(97)00092-1 Saito, 2005, Production of cobalt binding ligands in a Synechococcus feature at the Costa Rica upwelling dome, Limnology and Oceanography, 50, 279, 10.4319/lo.2005.50.1.0279 Selph, 2001, Microbial community composition and growth dynamics in the Antarctica Polar Front and seasonal ice zone during late spring 1997, Deep-Sea Research II, 48, 4059, 10.1016/S0967-0645(01)00077-7 Selph, 2011, Spatially-resolved taxon-specific phytoplankton production and grazing dynamics in relation to iron distributions in the equatorial Pacific between 110 and 140°W, Deep-Sea Research II, 58, 358, 10.1016/j.dsr2.2010.08.014 Sherr, B.F., Sherr, E.B., 1993. Preservation and storage of samples for enumeration of heterotrophic protists. In: P.F. Kemp, P.F., Sherr, B.F., Sherr, E.B., Cole, J.J., (Eds.), Handbook of Methods in Aquatic Microbial Ecology. CRC-Press, 207–212. Sherr, 2002, Significance of predation by protists in aquatic microbial food webs, Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology, 81, 293, 10.1023/A:1020591307260 Silver, 1981, Differential feeding and fecal pellet composition of salps and pteropods, and the possible origin of the deep-water flora and olive-green cells, Marine Biology, 62, 263, 10.1007/BF00397693 Silver, 1991, The “particle” flux: origins and biological components, Progress in Oceanography, 26, 75, 10.1016/0079-6611(91)90007-9 Sohrin, 2011, Distribution of Synechococcus in the dark ocean, Aquatic Microbial Ecology, 64, 1, 10.3354/ame01508 Straile, 1997, Gross growth efficiencies of protozoan and metazoan zooplankton and their dependence on food concentration, predator-prey weight ratio, and taxonomic growth, Limnology and Oceanography, 42, 1375, 10.4319/lo.1997.42.6.1375 Strickland, J.D., Parsons, T.R., 1972. A Practical Handbook of Seawater Analysis, second ed. Bulletin of the Fisheries Research Board of Canada, No. 167. Stukel, 2010, Contribution of picophytoplankton to carbon export in the equatorial Pacific: a re-assessment of food-web flux inferences from inverse models, Limnology and Oceanography, 55, 2669, 10.4319/lo.2010.55.6.2669 Taylor, A.G., Goericke, R., Landry, M.R., Selph, K.E., Wick, D.A., Roadman, M.J., 2012. Sharp gradients in phytoplankton community structure across a frontal zone in the California Current Ecosystem. Journal of Plankton Research. Turley, 1995, Bacterial and cyanobacterial flux to the deep NE Atlantic on sedimenting particles, Deep-Sea Research I, 42, 1453, 10.1016/0967-0637(95)00056-C Waite, 2000, Mass sedimentation of picoplankton embedded in organic aggregates, Limnology and Oceanography, 45, 87, 10.4319/lo.2000.45.1.0087 Wilson, 2010, Autotrophic picoplankton in mesozooplankton guts: evidence of aggregate feeding in the mesopelagic zone and export of small phytoplankton, Marine Ecology Progress Series, 412, 11, 10.3354/meps08648 Wyman, 1992, An in vivo method for the estimation of phycoerythrin concentrations in marine cyanobacteria (Synechococcus spp.), Limnology and Oceanography, 37, 1300, 10.4319/lo.1992.37.6.1300 Zhang, 1995, Latitudinal variations in mesozooplankton grazing and metabolism in the central tropical Pacific during the US JGOFS EqPac Study, Deep-Sea Research II, 42, 695, 10.1016/0967-0645(95)00032-L