The perfect storm: Match-mismatch of bio-physical events drives larval reef fish connectivity between Pulley Ridge mesophotic reef and the Florida Keys

Armstrong, 2006, Characterizing the deep insular shelf coral reef habitat of the Hind Bank marine conservation district (US Virgin Islands) using the Seabed autonomous underwater vehicle, Cont. Shelf Res., 26, 194, 10.1016/j.csr.2005.10.004

Ayata, 2010, How does the connectivity between populations mediate range limits of marine invertebrates? A case study of larval dispersal between the Bay of Biscay and the English Channel (North-East Atlantic), Progress Oceanogr., 87, 18, 10.1016/j.pocean.2010.09.022

Ayata, 2009, Modelling larval dispersal and settlement of the reef-building polychaete Sabellaria alveolata: role of hydroclimatic processes on the sustainability of biogenic reefs, Cont. Shelf Res., 29, 1605, 10.1016/j.csr.2009.05.002

Bak, 2005, Coral reef crisis in deep and shallow reefs: 30 years of constancy and change in reefs of Curacao and Bonaire, Coral Reefs, 24, 475, 10.1007/s00338-005-0009-1

Baker, E.K., Puglise, K.A., Harris, P.T. (Eds.). 2016. Mesophotic Coral Ecosystems – A Lifeboat for Coral reefs? e United Nations Environment Programme and GRID-Arendal, Nairobi and Arendal, 98 p.

Bare, 2010, Mesophotic communities of the insular shelf at Tutuila, American Samoa, Coral Reefs, 29, 369, 10.1007/s00338-010-0600-y

Brazeau, 2013, Genetic structure in the Coral, Montastraea cavernosa: assessing genetic differentiation among and within Mesophotic Reefs, PLoS ONE, 8, e65845, 10.1371/journal.pone.0065845

Bridge, 2010, Topography, substratum and benthic macrofaunal relationships on a tropical mesophotic shelf margin, central Great Barrier Reef, Australia, Coral Reefs, 30, 143, 10.1007/s00338-010-0677-3

Bongaerts, 2010, Assessing the ‘deep reef refugia’ hypothesis: focus on Caribbean reefs, Coral Reefs, 29, 309, 10.1007/s00338-009-0581-x

Costantini, 2011, Low connectivity and declining genetic variability along a depth gradient in Corallium rubrum populations, Coral Reefs, 30, 991, 10.1007/s00338-011-0771-1

Cushing, 1969, The regularity of the spawning season of some fishes, Cons. Perm. Int. pour l’Exploration De. La. Mer., 33, 81, 10.1093/icesjms/33.1.81

Emery, 2004, Data analysis

Haller, 2000, Finding finite-time invariant manifolds in two-dimensional velocity fields, Chaos, 10, 99, 10.1063/1.166479

Haller, 2015, Lagrangian coherent structures, Annu. Rev. Fluid Mech., 47, 137, 10.1146/annurev-fluid-010313-141322

Halley, 2005

He, 2003, West Florida shelf circulation and temperature budget for the 1998 fall transition, Cont. Shelf Res., 23, 777, 10.1016/S0278-4343(03)00028-1

Hetland, 1999, A loop current-induced jet along the edge of the West Florida shelf, Geophys. Res. Lett., 26, 2239, 10.1029/1999GL900463

Hixon, 2012, Density dependence and population regulation in marine fish: a large-scale, long-term field manipulation, Ecol. Monogr., 82, 467, 10.1890/11-1525.1

Holstein, 2014, Consistency and inconsistency in multispecies population network dynamics of coral reef ecosystems, Mar. Ecol. Progress. Ser., Feature Artic., 499, 1, 10.3354/meps10647

Holstein, 2015, Modeling vertical coral connectivity and mesophotic refugia, Coral Reefs, 35, 23, 10.1007/s00338-015-1339-2

Kahng, 2014, Recent advances in the ecology of mesophotic coral ecosystems (MCEs), Curr. Opin. Environ. Sustain., 7, 72, 10.1016/j.cosust.2013.11.019

Kahng, 2010, Community ecology of mesophotic coral reef ecosystems, Coral Reefs, 29, 255, 10.1007/s00338-010-0593-6

Karnauskas, 2011, Adaptive significance of the formation of multi species fish spawning aggregations near submerged capes, PLoS One, 6, e22067, 10.1371/journal.pone.0022067

Kough, 2013, Larval connectivity and the international management of fisheries, PLoS One, 8, e64970, 10.1371/journal.pone.0064970

Kourafalou, 2009, Evaluation of global ocean data assimilation experiment products on South Florida nested simulations with the hybrid coordinate ocean model, Ocean Dyn., 59, 47, 10.1007/s10236-008-0160-7

Kourafalou, 2012, Florida current meandering and evolution of cyclonic eddies along the Florida Keys Reef Tract: are they inter-connected?, J. Geophys. Res., 117, C05028, 10.1029/2011JC007383

Leben, 2005, Altimeter-derived loop current metrics

Lee, 1992, Influence of Florida current, gyres and wind-driven circulation on transport of larvae and recruitment in the Florida Keys coral reefs, Cont. Shelf Res., 12, 971, 10.1016/0278-4343(92)90055-O

Lee, 1999, Mean distribution and seasonal variability of coastal currents and temperature in the Florida Keys with implications for larval recruitment, Bull. Mar. Sci., 64, 35

Lesser, 2009, Ecology of mesophotic coral reefs, J. Exp. Mar. Biol. Ecol., 375, 1, 10.1016/j.jembe.2009.05.009

Limouzy-Paris, 1997, Translocation of larval coral reef fishes via sub-mesoscale spin-off eddies from the Florida current, Bull. Mar. Sci., 60, 966

Liu, 2012, Seasonal variability on the West Florida shelf, Progress. Oceanogr., 104, 80, 10.1016/j.pocean.2012.06.001

Menza, 2008, The deeper we go the less we know, Rev. De. Biol. Trop., 56, 11

Menza, 2007, A deep reef in deep trouble, Cont. Shelf Res., 27, 2224, 10.1016/j.csr.2007.05.017

Olascoaga, 2010, Isolation on the West Florida shelf with implications for red tides and pollutant dispersal in the Gulf of Mexico, Nonlinear Process. Geophys., 17, 685, 10.5194/npg-17-685-2010

Paris-Limouzy, 2001

Paris, 2013, Connectivity Modeling System (CMS): a multi-scale tool for the tracking of biotic and abiotic variability in the ocean, Environ. Model. Softw., 42, 47, 10.1016/j.envsoft.2012.12.006

Paris, 2007, Surfing, spinning, or diving from reef to reef: effects on population connectivity, Mar. Ecol. Progress. Ser., 347, 285, 10.3354/meps06985

Paris, 2004, Direct evidence of a biophysical retention mechanism for coral fish larvae, Limnol. Oceanogr., 49, 1964, 10.4319/lo.2004.49.6.1964

Paris, 2002, Multivariate objective analysis of the coastal circulation of Barbados, West Indies: implication for larval transport, Deep-Sea Res. I, 49, 1363, 10.1016/S0967-0637(02)00033-X

Prada, 2013, Long prereproductive selection and divergence by depth in a Caribbean candelabrum coral, PNAS, 110, 3961, 10.1073/pnas.1208931110

Puglise, 2016, Understanding mesophotic coral reef ecosystems: knowledge gaps for management

Reed, 2016, Pulley ridge, gulf of Mexico, USA

Reed, J., Farrington, S., Moe, H., Harter, S., Hanisak, D., David. A., 2014. Characterization of the Mesophotic Benthic Habitat and Fish Assemblages from ROV Dives on Pulley Ridge and Tortugas during 2012 and 2013 R/V Walton Smith Cruises. NOAA CIOERT Cruise Report. Report to NOAA-NOS-NCCOS. 44 pp. (HBOI Technical Report Number 147).

Serrano, 2014, Geographic differences in vertical connectivity in the Caribbean coral Montastraea cavernosa despite high levels of horizontal connectivity at shallow depths, Mol. Ecol., 23, 4226, 10.1111/mec.12861

Sponaugle, 1996, Larval supply and patterns of recruitment for two Caribbean Reef fishes, Stegastes partitus and Acanthurus bahianus. Mar: Freshwater Res., 47, 433

Sponaugle, 2012, Observed and modeled larval settlement of a reef fish to the Florida Keys, Mar. Ecol. Progress. Ser., 453, 201, 10.3354/meps09641

Sponaugle, 2005, Florida current frontal eddies and the settlement of coral reef fishes, Limnol. Oceanogr., 50, 1033, 10.4319/lo.2005.50.4.1033

Suman, 1999, Perceptions and attitudes regarding marine reserves: a comparison of stakeholder groups in the Florida Keys National Marine Sanctuary, Ocean Coast. Manag., 42, 1019, 10.1016/S0964-5691(99)00062-9

Tenggardjaja, 2014, Vertical and horizontal genetic connectivity in Chromis verater, an endemic damselfish found on shallow and mesophotic reefs in the Hawaiian Archipelago and Adjacent Johnston Atoll, PLoS ONE, 9, e115493, 10.1371/journal.pone.0115493

van Oppen, 2011, The role of deep reefs in shallow reef recovery: an assessment of vertical connectivity in a brooding coral from west and east Australia, Mol. Ecol., 20, 1647, 10.1111/j.1365-294X.2011.05050.x

Vaz, 2013, Mesoscale flow variability and its impact on connectivity for the island of Hawaii, Geophys. Res. Lett., 40, 332, 10.1029/2012GL054519

Weisberg, 2005, West florida shelf circulation on synoptic, seasonal, and interannual time scales

Weisberg, 2003, Local and deep-ocean forcing contributions to anomalous water properties on the West Florida shelf, J. Geophys. Res.: Ocean., 108, C6, 10.1029/2002JC001407