The organic geochemistry of glycerol dialkyl glycerol tetraether lipids: A review
Tóm tắt
Từ khóa
Tài liệu tham khảo
Agogue, 2008, Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic, Nature, 456, 788, 10.1038/nature07535
Ahmed, 2000, Bound lipids in kerogens from the Monterey Formation, Naples Beach, USA, 189
Auguet, 2009, Global ecological patterns in uncultured Archaea, The ISME Journal, 4, 182, 10.1038/ismej.2009.109
Bai, 1997, A method for determination of archaeal ether-linked glycerolipids by high performance liquid chromatography with fluorescence detection as their 9-anthroyl derivatives, Chemosphere, 35, 263, 10.1016/S0045-6535(97)00154-9
Ballantyne, 2010, Significantly higher Arctic surface temperatures during the Pliocene indicated by multiple independent temperature proxies, Geology, 38, 603, 10.1130/G30815.1
Bannert, 2011, Comparison of lipid biomarker and gene abundance characterizing the archaeal ammonia-oxidizing community in flooded soils, Biology and Fertility of Soils, 47, 839, 10.1007/s00374-011-0552-6
Bechtel, 2010, Distribution of branched and isoprenoid tetraether lipids in an oligotrophic and a eutrophic Swiss lake: insights into sources and GDGT-based proxies, Organic Geochemistry, 41, 822, 10.1016/j.orggeochem.2010.04.022
Belicka, 2009, The sequestration of terrestrial organic carbon in Arctic Ocean sediments: a comparison of methods and implications for regional carbon budgets, Geochimica et Cosmochimica Acta, 73, 6231, 10.1016/j.gca.2009.07.020
Beman, 2010, Population ecology of nitrifying Archaea and Bacteria in the Southern California Bight, Environmental Microbiology, 12, 1282, 10.1111/j.1462-2920.2010.02172.x
Bendle, 2010, Major changes in Last Glacial and Holocene terrestrial temperatures and sources of organic carbon recorded in the Amazon fan by the MBT/CBT continental paleothermometer, Geochemistry Geophysics Geosystems, 11, Q12007, 10.1029/2010GC003308
Benthien, 2000, Anomalously low alkenone temperatures caused by lateral particle and sediment transport in the Malvinas Current region, western Argentine Basin, Deep Sea Research I, 47, 2369, 10.1016/S0967-0637(00)00030-3
Berg, 2007, A 3-hydroxypropionate/4-hydroxybutyrate autotrophic carbon dioxide assimilation pathway in archaea, Science, 318, 1782, 10.1126/science.1149976
Bice, 2006, A multiple proxy and model study of the Cretaceous upper ocean temperatures and atmospheric CO2 concentrations, Paleoceanography, 21, PA2002, 10.1029/2005PA001203
Biddle, 2006, Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru, Proceedings of the National Academy of Sciences USA, 103, 3846, 10.1073/pnas.0600035103
Bijl, 2009, Early Palaeogene temperature evolution of the Southwest Pacific Ocean, Nature, 461, 776, 10.1038/nature08399
Bijl, 2010, Transient Middle Eocene atmospheric CO2 and temperature variations, Science, 313, 819, 10.1126/science.1193654
Birgel, 2008, A new constraint on the antiquity of anaerobic oxidation of methane: late Pennsylvanian seep limestones from southern Namibia, Geology, 36, 543, 10.1130/G24690A.1
Birgel, 2008, 13C-depleted biphytanic diacids as tracers of past anaerobic oxidation of methane, Organic Geochemistry, 39, 152, 10.1016/j.orggeochem.2007.08.013
Biton, 2010, Sensitivity of Red Sea circulation to monsoonal variability during the Holocene: an integrated data and modelling study, Paleoceanography, 25, PA4209, 10.1029/2009PA001876
Blaga, 2009, Tetraether membrane lipid distributions in lake particulate matter and sediments: a study of 47 European lakes along a North–South transect, Journal of Paleolimnology, 41, 523, 10.1007/s10933-008-9242-2
Blaga, 2010, Branched glycerol dialkyl glycerol tetraethers in lake sediments: can they be used as temperature and pH proxies?, Organic Geochemistry, 41, 1225, 10.1016/j.orggeochem.2010.07.002
Blaga, 2011, Seasonal changes in glycerol dialkyl glycerol tetraether concentrations and fluxes in a perialpine lake: Implications for the use of the TEX86 and BIT proxies, Geochimica et Cosmochimica Acta, 75, 6416, 10.1016/j.gca.2011.08.016
Blank, 2009, Not so old Archaea – the antiquity of biogeochemical processes in the archaeal domain of life, Geobiology, 7, 495, 10.1111/j.1472-4669.2009.00219.x
Blöchl, 1997, Pyrolobus fumarii, gen. and sp. nov., represents a novel group of archaea, extending the upper temperature limit for life to 113°C, Extremophiles, 1, 14, 10.1007/s007920050010
Blumenberg, 2004, Membrane lipid patterns typify distinct anaerobic methanotrophic consortia, Proceedings of the National Academy of Sciences USA, 101, 11111, 10.1073/pnas.0401188101
Blumenberg, 2007, Biosignatures present in a hydrothermal massive sulfide from the Mid-Atlantic Ridge, Geobiology, 5, 435, 10.1111/j.1472-4669.2007.00126.x
Bornemann, 2008, Isotopic evidence for a glaciation event during the early Late Cretaceous super-greenhouse episode, Science, 319, 189, 10.1126/science.1148777
Boyd, 2011, Temperature and pH controls on glycerol dibiphytanyl glycerol tetraether lipid composition in the hyperthermophilic crenarchaeon Acidilobus sulfurireducens, Extremophiles, 15, 59, 10.1007/s00792-010-0339-y
Brassell, 2004, Recognition of alkenones in a Lower Aptian porcellanite from the west-central Pacific, Organic Geochemistry, 35, 181, 10.1016/j.orggeochem.2003.09.003
Brinkhuis, 2006, Episodic fresh surface waters in the Eocene Arctic Ocean, Nature, 441, 606, 10.1038/nature04692
Brochier-Armanet, 2008, Mesophilic Crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota, Nature Reviews in Microbiology, 6, 245, 10.1038/nrmicro1852
Brocks, 2008, Okenane, a biomarker for purple sulfur bacteria (Chromatiaceae), and other new carotenoid derivatives from the 1640 Ma Barney Creek Formation, Geochimica et Cosmochimica Acta, 72, 1396, 10.1016/j.gca.2007.12.006
Brocks, 2008, Assessing biomarker syngeneity using branched alkanes with quaternary carbon (BAQCs) and other plastic contaminants, Geochimica et Cosmochimica Acta, 72, 871, 10.1016/j.gca.2007.11.028
Burgess, 2008, Middle Eocene climate cyclicity in the southern Pacific: implications for global ice volume, Geology, 36, 651, 10.1130/G24762A.1
Burgess, 2012, Comparative geochemical and microbiological characterization of two thermal pools in the Uzon Caldera, Kamchatka, Russia, Microbial Ecology, 63, 471, 10.1007/s00248-011-9979-4
Burhan, 2002, Fossil bacterial ecosystem at methane seeps: origin of organic matter from Be’eri sulfur deposit, Israel, Geochimica et Cosmochimica Acta, 66, 4085, 10.1016/S0016-7037(02)00979-1
Canganella, 1998, Thermococcus guaymasensis sp. nov. and Thermococcus aggregans sp. nov., two novel thermophilic archaea isolated from the Guaymas Basin hydrothermal vent site, International Journal of Systematic Bacteriology, 48, 1181, 10.1099/00207713-48-4-1181
Carrillo-Hernandez, T., 2004. Caractérisation Moléculaire et Isotopique de Biomarqueurs de Milieu de Dépôt Ancient très Immatures (Jurassique Supérieur de la Plate-forme-Russe). PhD Thesis, University of Strasbourg, 299 pp.
Carrillo-Hernandez, T., Schaeffer, P., Adam, P., Albrecht, P., Derenne, S., Largeau, C., 2003. Remarkably well-preserved archaeal and bacterial membrane lipids in 140 million year old sediments from the Russian platform (Kashpir Oil Shales, Upper Jurassic). In: 21st International Meeting on Organic Geochemistry, Krakow, pp. 77–78 (Abstract).
Castañeda, 2010, Millennial-scale sea surface temperature changes in the Eastern Mediterranean (Nile River Delta Region) over the last 27,000 years, Paleoceanography, 25, PA1208, 10.1029/2009PA001740
Chappe, B., 1982. Fossiles Moléculaires d’Archaebacteries. PhD Thesis, University of Strasbourg, 164 pp.
Chappe, 1979, Fossil evidence for a novel series of archaeabacterial lipids, Naturwissenschaften, 66, 522, 10.1007/BF00404868
Chappe, 1980, Molecular fossils of Archaebacteria as selective degradation products of kerogen, 265
Chappe, 1982, Polar lipids of archaebacteria in sediments and petroleum, Science, 217, 65, 10.1126/science.217.4554.65
Comita, 1994, Structural elucidation of a unique macrocyclic membrane lipid from a new, extremely thermophilic, deep-sea hydrothermal vent Archaebacterium, Methanococcus jannaschii, Journal of Biological Chemistry, 24, 15234
Coolen, 2007, Putative ammonia-oxidizing Crenarchaeota in suboxic waters of the Black Sea: a basin-wide ecological study using 16S ribosomal and functional genes and membrane lipids, Environmental Microbiology, 9, 1001, 10.1111/j.1462-2920.2006.01227.x
Das, S.K., Bendle, J., Routh, J., in press. Evaluating branched tetraether lipid-based paleotemperature proxies in an urban, hyper-eutrophic polluted lake in South Africa. Organic Geochemistry.
De la Torre, 2008, Cultivation of a thermophilic ammonia oxidizing archaeon synthesizing crenarchaeol, Environmental Microbiology, 10, 810, 10.1111/j.1462-2920.2007.01506.x
De Lemos Scofield, A., 1990. Nouveaux Marqueurs Biologiques de Sédiments et Pétroles Riches en Soufre: identification et Mode de Formation. Ph.D. Thesis, University of Strasbourg, pp. 193.
De Rosa, 1988, The lipids of archaeabacteria, Progress in Lipid Research, 27, 153, 10.1016/0163-7827(88)90011-2
De Rosa, 1980, Effects of temperature on ether lipid composition of Caldariella acidophila, Phytochemistry, 19, 827, 10.1016/0031-9422(80)85120-X
De Rosa, 1983, Isoprenoid ethers; backbone of complex lipids of Sulfolobus solfataricus, Biochimica et Biophysica Acta, 753, 249, 10.1016/0005-2760(83)90014-0
De Rosa, 1986, A range of ether core lipids from the methanogenic archaebacterium Methanosarcinia barkerii, Biochimica et Biophysica Acta, 875, 487, 10.1016/0005-2760(86)90068-8
DeLong, 1992, Archaea in coastal marine environments, Proceedings of the National Academy of Sciences USA, 89, 5685, 10.1073/pnas.89.12.5685
DeLong, 2006, Archaeal mysteries of the deep revealed, Proceedings of the National Acadamy of Sciences USA, 103, 6417, 10.1073/pnas.0602079103
DeLong, 1998, Dibiphytanyl ether lipids in nonthermophilic Crenarchaeotes, Applied and Environmental Microbiology, 64, 1133, 10.1128/AEM.64.3.1133-1138.1998
D’Hondt, 1996, Late Cretaceous oceans and the cool tropics paradox, Science, 271, 1838, 10.1126/science.271.5257.1838
Donders, 2009, Coupled land–sea Miocene climate changes from the Southern North Sea Basin, NW Europe: a palynological and organic geochemical approach, Earth and Planetary Science Letters, 281, 215, 10.1016/j.epsl.2009.02.034
Dumitrescu, 2006, Instability in tropical sea surface temperatures during the early Aptian, Geology, 34, 833, 10.1130/G22882.1
Eberle, 2010, Seasonal variability in Arctic temperatures during early Eocene time, Earth and Planetary Science Letters, 292, 265
Eglinton, 1996, Gas chromatographic isolation of individual compounds from complex matrices for radiocarbon dating, Analytical Chemistry, 68, 904, 10.1021/ac9508513
Elvert, 2005, Spatial variations of methanotrophic consortia at cold methane seeps: implications from a high-resolution molecular and isotopic approach, Geobiology, 3, 195, 10.1111/j.1472-4669.2005.00051.x
Escala, 2007, Rapid screening of glycerol dialkyl glycerol tetraethers in continental Eurasia samples using HPLC/APCI-ion trap mass spectrometry, Organic Geochemistry, 38, 161, 10.1016/j.orggeochem.2006.08.013
Escala, 2009, Analytical considerations for the use of the paleothermometer Tetraether Index86 and the branched vs isoprenoid tetraether index regarding the choice of cleanup and instrumental conditions, Analytical Chemistry, 81, 2701, 10.1021/ac8027678
Fallet, 2011, Variability in foraminiferal and organic paleotemperature signatures in the Mozambique Channel (SW Indian Ocean), Geochimica et Cosmochimica Acta, 75, 5834, 10.1016/j.gca.2011.08.009
Fawcett, 2011, Extended megadroughts in the Southwestern United States during Pleistocene interglacials, Nature, 470, 518, 10.1038/nature09839
Ferrante, 1986, Structural characterization of the lipids of Methanococcus voltae, including a novel N-acetylglusoamine 1-phosphate diether, Journal of Biological Chemistry, 261, 17062, 10.1016/S0021-9258(19)75999-7
Fietz, 2011, Constraints in the application of the Branched and Isoprenoid Tetraether index as a terrestrial input proxy, Journal of Geophysical Research, 116, C10032, 10.1029/2011JC007062
Fischer, 2005, Targeted genomic detection of biosynthetic pathways: anaerobic production of hopanoid biomarkers by a common sedimentary microbe, Geobiology, 3, 33, 10.1111/j.1472-4669.2005.00041.x
Fitz, 1992, Biosynthesis of 15,16-dimethyltriacontanedioic acid (diabolic acid) from (16-2H3)- and (14-2H2)-palmitic acids, Journal of the Chemical Society, Chemical Communications, 1533, 10.1039/c39920001533
Forster, 2007, Tropical warming and intermittent cooling during the Cenomanian/Turonian Oceanic Anoxic Event (OAE 2): sea surface temperature records from the equatorial Atlantic, Paleoceanography, 22, PA1219, 10.1029/2006PA001349
Forster, 2007, A mid-Cretaceous sea surface temperature record of the tropical Atlantic Ocean, Geology, 35, 919, 10.1130/G23874A.1
Francis, 2005, Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean, Proceedings of the National Academy of Sciences USA, 102, 14683, 10.1073/pnas.0506625102
Fredrickson, 1989, Fast atom bombardment (tandem) mass spectrometric analysis of intact polar ether lipids extractable from the extremely halophilic archaebacterium Halobacterium cutirubrum, Biological Mass Spectrometry, 18, 96, 10.1002/bms.1200180203
Fuhrman, 1992, Novel major archaebacterial group from marine plankton, Nature, 356, 148, 10.1038/356148a0
Gabriel, 2000, Molecular modeling of archaebacterial bipolar tetraether lipid membranes, Chemistry and Physics of Lipids, 105, 193, 10.1016/S0009-3084(00)00126-2
Galand, 2010, Inter-annual recurrence of archaeal assemblages in the coastal NW Mediterranean Sea (Blanes Bay Microbial Observatory), Limnology and Oceanography, 55, 2117, 10.4319/lo.2010.55.5.2117
Galliker, P., Grather, O., Rummler, M., Fitz, W., Arigoni, D., 1998. New structural and biosynthetic aspects of the unusual core lipids from Archaebacteria: In: Krautler, B., Arigoni, D., Golding, B.T. (Eds), Vitamin B12 B12-Proteins. Lectures Presented at the 4th European Symposium on Vitamin B12 and B12-Proteins, pp. 447–458.
Gao, 2012, The importance of solar insolation on the temperature variations for the past 110kyr on the Chinese Loess Plateau, Palaeogeography, Palaeoclimatology, Palaeoecology, 317–318, 128, 10.1016/j.palaeo.2011.12.021
Gliozzi, 1983, Effect of isoprenoid cyclization on the transition temperature of lipids in thermophilic archaeabacteria, Biochimica et Biophysica Acta, 735, 234, 10.1016/0005-2736(83)90298-5
Golyshina, 2009, Acidiplasma aeolicum gen. nov., sp. nov., a euryarchaeon of the family Ferroplasmaceae isolated from a hydrothermal pool, and transfer of Ferroplasma cupricumulans to Acidiplasma cupricumulans comb. nov., International Journal of Systematic and Evolutionary Microbiology, 59, 2815, 10.1099/ijs.0.009639-0
Gonzalez, 2006, Metabolically active Crenarchaeota in Altamira Cave, Naturwissenschaften, 93, 42, 10.1007/s00114-005-0060-3
Gräther, 1995, Detection of regioisomeric macrocyclic tetraethers in the lipids of Methanobacterium thermoautotrophicum and other archaeal organisms, Journal of the Chemical Society, Chemical Communications, 23, 405, 10.1039/C39950000405
Hafenbradl, 1996, Ferroglobus placidus gen. nov., sp. nov., a novel hyperthermophilic archaeum that oxidizes Fe2+ at neutral pH under anoxic conditions, Archives of Microbiology, 166, 308, 10.1007/s002030050388
Hallam, 2006, Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota, Plos Biology, 4, 520, 10.1371/journal.pbio.0040095
Harvey, 1986, The effect of organic matter and oxygen on the degradation of bacterial membrane lipids in marine sediments, Geochimica et Cosmochimica Acta, 50, 795, 10.1016/0016-7037(86)90355-8
Heathcock, 1985, Stereo structure of the archaebacterial C40 diol, Science, 229, 862, 10.1126/science.3927485
Herfort, 2006, Characterization of transport and deposition of terrestrial organic matter in the southern North Sea using the BIT index, Limnology and Oceanography, 51, 2196, 10.4319/lo.2006.51.5.2196
Herfort, 2006, Application of the TEX86 temperature proxy in the southern North Sea, Organic Geochemistry, 37, 1715, 10.1016/j.orggeochem.2006.07.021
Herfort, 2007, Ecology and physiology of marine Archaea in the North Sea, FEMS Microbial Ecology, 62, 242, 10.1111/j.1574-6941.2007.00397.x
Herndl, 2005, Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean, Applied and Environmental Microbiology, 71, 2303, 10.1128/AEM.71.5.2303-2309.2005
Hinrichs, 1999, Methane-consuming archaebacteria in marine sediments, Nature, 398, 802, 10.1038/19751
Hoefs, 1997, Ether lipids of planktonic archaea in the marine water column, Applied and Environmental Microbiology, 63, 3090, 10.1128/AEM.63.8.3090-3095.1997
Hoffmann-Sell, 2011, Archaeal lipids in Neogene dolomites (Monterey and Sisquoc Formations, California) – Planktic versus benthic archaeal sources, Organic Geochemistry, 42, 593, 10.1016/j.orggeochem.2011.04.008
Höld, 1998, Changes in the molecular structure of a type II-S kerogen (Monterey Formation, USA) during sequential chemical degradation as monitored by flash pyrolysis, Organic Geochemistry, 29, 1403, 10.1016/S0146-6380(98)00158-2
Hollibaugh, 2011, Metatranscriptomic analysis of ammonia-oxidizing organisms in an estuarine bacterioplankton assemblage, The ISME Journal, 5, 866, 10.1038/ismej.2010.172
Hollis, 2009, Tropical sea temperatures in the high-latitude South Pacific during the Eocene, Geology, 37, 99, 10.1130/G25200A.1
Hollis, 2012, Early Paleogene temperature history of the Southwest Pacific Ocean: reconciling proxies and models, Earth and Planetary Science Letters, 349–350, 53, 10.1016/j.epsl.2012.06.024
Hönisch, 2012, The geological record of ocean acidification, Science, 335, 1058, 10.1126/science.1208277
Hopmans, 2000, Analysis of intact tetraether lipids in archaeal cell material and sediments by high performance liquid chromatography/atmospheric pressure chemical ionization mass spectrometry, Rapid Communications in Mass Spectrometry, 14, 585, 10.1002/(SICI)1097-0231(20000415)14:7<585::AID-RCM913>3.0.CO;2-N
Hopmans, 2004, A novel proxy for terrestrial organic matter in sediments based on branched and isoprenoid tetraether lipids, Earth and Planetary Science Letters, 24, 107, 10.1016/j.epsl.2004.05.012
Hren, 2010, Biomarker reconstruction of the early Eocene paleotopography and paleoclimate of the northern Sierra Nevada, Geology, 38, 7, 10.1130/G30215.1
Huber, 2011, The early Eocene equable climate problem revisited, Climate of the Past, 7, 603, 10.5194/cp-7-603-2011
Huber, 1998, Sulfur-inhibited Thermosphaera aggregans sp. nov., a new genus of hyperthermophilic archaea isolated after its prediction from environmentally derived 16S rRNA sequences, International Journal of Systematic Bacteriology, 48, 31, 10.1099/00207713-48-1-31
Huguet, 2006, An improved method to determine the absolute abundance of glycerol dibiphytanyl glycerol tetraether lipids, Organic Geochemistry, 37, 1036, 10.1016/j.orggeochem.2006.05.008
Huguet, 2006, Marine crenarchaeotal membrane lipids in decapods: implications for the TEX86 paleothermometer, Geochemistry Geophysics Geosystems, 10.1029/2006GC001305
Huguet, 2006, Application of the TEX86 temperature proxy in the reconstruction of glacial–interglacial sea surface temperature in the Arabian Sea, Paleoceanography, 21, PA3003, 10.1029/2005PA001215
Huguet, 2007, A study of the TEX86 paleothermometer in the water column and sediments of the Santa Barbara Basin, California, Paleoceanography, 10.1029/2006PA001310
Huguet, 2007, Twentieth century proxy records of temperature and soil organic matter input in the Drammensfjord, southern Norway, Organic Geochemistry, 38, 1838, 10.1016/j.orggeochem.2007.06.015
Huguet, 2008, Selective preservation of soil organic matter in oxidized marine sediments (Madeira Abyssal Plain), Geochimica et Cosmochimica Acta, 72, 6061, 10.1016/j.gca.2008.09.021
Huguet, 2009, Effects of long-term oxic degradation on the U37K′, TEX86 and BIT organic proxies, Organic Geochemistry, 40, 1188, 10.1016/j.orggeochem.2009.09.003
Huguet, 2010, Occurrence and distribution of extractable glycerol dialkyl glycerol tetraethers in podzols, Organic Geochemistry, 41, 291, 10.1016/j.orggeochem.2009.10.007
Huguet, 2010, Occurrence and distribution of glycerol dialkyl glycerol tetraethers in a French peat bog, Organic Geochemistry, 41, 559, 10.1016/j.orggeochem.2010.02.015
Huguet, 2010, Changes in intact membrane lipid content of archaeal cells as an indication of metabolic status, Organic Geochemistry, 41, 930, 10.1016/j.orggeochem.2010.04.012
Huguet, 2010, Comparison of extraction methods for quantitative analysis of core and intact polar glycerol dialkyl glycerol tetraethers (GDGTs) in environmental samples, Limnology and Oceanography Methods, 8, 127, 10.4319/lom.2010.8.127
Huguet, 2011, Coherent millennial scale patterns in U37K′ and TEX86H temperature records during the penultimate interglacial-to-glacial cycle in the western Mediterranean, Paleoceanography, 26, PA2218, 10.1029/2010PA002048
Huguet, 2012, Branched tetraether membrane lipids associated with rhizoliths in loess: Rhizomicrobial overprinting of initial biomarker record, Organic Geochemistry, 43, 12, 10.1016/j.orggeochem.2011.11.006
Ingalls, 2006, Quantifying archaeal community autotrophy in the mesopelagic ocean using natural radiocarbon, Proceedings of the National Acadamy of Sciences USA, 103, 6442, 10.1073/pnas.0510157103
Ionescu, 2009, Archaea in the Gulf of Aqaba, FEMS Microbiology Letters, 69, 425, 10.1111/j.1574-6941.2009.00721.x
Itoh, 1999, Caldivirga maquilingensis gen. nov., sp. nov., a new genus of rod-shaped crenarchaeote isolated from a hot spring in the Philippines, International Journal of Systematic Bacteriology, 49, 1157, 10.1099/00207713-49-3-1157
Itoh, 2003, Caldisphaera lagunensis gen. nov., sp. nov., a novel thermoacidophilic crenarchaeote isolated from a hot spring at Mt Maquiling, Philippines, International Journal of Systematic and Evolutionary Microbiology, 53, 1149, 10.1099/ijs.0.02580-0
Jahn, 2004, Composition of the lipids of Nanoarchaeum equitans and their origin from its host Ignicoccus sp. strain KIN4/I, Archives of Microbiology, 182, 404, 10.1007/s00203-004-0725-x
Jenkyns, 2004, High temperatures in the Late Cretaceous Arctic Ocean, Nature, 432, 888, 10.1038/nature03143
Jenkyns, 2012, Middle Jurassic–Early Cretaceous high-latitude sea-surface temperatures from the Southern Ocean, Climate of the Past, 8, 215, 10.5194/cp-8-215-2012
Jones, 2009, A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses, The ISME Journal, 3, 442, 10.1038/ismej.2008.127
Jung, 2011, Enrichment and characterization of an autotrophic ammonia-oxidizing archaeon of mesophilic crenarchaeal group I.1a from an agricultural soil, Applied and Environmental Microbiology, 77, 8635, 10.1128/AEM.05787-11
Kabel, K., Moros, M., Porsche, C., Neumann, T., Adolphi, F., Andersen, T.J., Siegel, H., Gerth, M., Leipe, T., Jansen, E., Sinninghe Damsté, J.S., in press. Impact of climate change on the Baltic Sea ecosystem over the past 1000 years. Nature Climate Change. http://dx.doi.org/10.1038/nclimate1595.
Kaneko, 2011, Stable hydrogen isotope measurement of archaeal ether-bound hydrocarbons, Organic Geochemistry, 42, 166, 10.1016/j.orggeochem.2010.11.002
Karner, 2001, Archaeal dominance in the mesopelagic zone of the Pacific Ocean, Nature, 409, 507, 10.1038/35054051
Kaur, 2011, Preservation of microbial lipids in geothermal sinters, Astrobiology, 11, 259, 10.1089/ast.2010.0540
Kaur, 2011, Relationship between lipid distribution and geochemical environment within Champagne Pool, Waiotapu, New Zealand, Organic Geochemistry, 42, 1203, 10.1016/j.orggeochem.2011.08.006
Keating-Bitonti, 2011, Warm, not super-hot, temperatures in the early Eocene subtropics, Geology, 39, 771, 10.1130/G32054.1
Keil, 1994, Sorptive preservation of labile organic matter in marine sediments, Nature, 370, 549, 10.1038/370549a0
Kim, 2006, Origin and distribution of terrestrial organic matter in the NW Mediterranean (Gulf of Lions): application of the newly developed BIT index, Geochemistry Geophysics Geosystems, 7, 10.1029/2006GC001306
Kim, 2007, Impact of flood events on the transport of terrestrial organic matter to the ocean: a study of the Têt River (SW France) using the BIT index, Organic Geochemistry, 38, 1593, 10.1016/j.orggeochem.2007.06.010
Kim, 2008, Global core-top calibration of the TEX86 paleothermometer in the ocean, Geochimica et Cosmochimica Acta, 72, 1154, 10.1016/j.gca.2007.12.010
Kim, 2009, Impact of lateral transport on organic proxies in the Southern Ocean, Quaternary Research, 71, 246, 10.1016/j.yqres.2008.10.005
Kim, 2009, An experimental field study to test the stability of lipids used for TEX86 and U37K′ palaeothermometry, Geochimica et Cosmochimica Acta, 73, 2888, 10.1016/j.gca.2009.02.030
Kim, 2009, Delivery of terrestrial organic matter during wet and dry storms on the Têt inner shelf (NW Mediterranean), Palaeogeography Palaeoclimatology Palaeoecology, 273, 228, 10.1016/j.palaeo.2008.04.019
Kim, 2010, Contribution of river-borne soil organic carbon to the Gulf of Lions (NW Mediterranean), Limnonology and Oceanography, 55, 507, 10.4319/lo.2009.55.2.0507
Kim, 2010, New indices and calibrations derived from the distribution of crenarchaeal isoprenoid tetraether lipids: implications for past sea surface temperature reconstructions, Geochimica et Cosmochimica Acta, 74, 4639, 10.1016/j.gca.2010.05.027
Kim, 2011, Large ancient organic matter contributions to Arctic marine sediments (Svalbard), Limnology and Oceanography, 56, 1463, 10.4319/lo.2011.56.4.1463
Kim, 2012, Cultivation of an ammonia-oxidizing archaeon of thaumarchaeotal group I.1b from an agricultural soil, Environmental Microbiology, 14, 1528, 10.1111/j.1462-2920.2012.02740.x
Kim, 2012, Tracing soil organic carbon in the lower Amazon River and its tributaries using GDGT distributions and bulk organic matter properties, Geochimica et Cosmochimica Acta, 90, 163, 10.1016/j.gca.2012.05.014
Kim, 2012, Pronounced subsurface cooling of North Atlantic waters off Northwest Africa during Dansgaard–Oeschger interstadials, Earth and Planetary Science Letters, 339–340, 95, 10.1016/j.epsl.2012.05.018
King, 1998, Archaea in Black Sea water column particulate matter and sediments – evidence from ether lipid derivatives, Organic Geochemistry, 28, 677, 10.1016/S0146-6380(98)00037-0
Knappy, C.S., 2010. Mass Spectrometric Studies of Ether Lipids in Archaea and Sediments. PhD Thesis, University of York, 406 pp.
Knappy, 2012, Novel glycerol dialkanol triols in sediments: transformation products of glycerol dibiphytanyl glycerol tetraether lipids or biosynthetic intermediates?, Chemical Communications, 48, 841, 10.1039/C1CC15841D
Knappy, 2009, Rapid discrimination of Archaeal tetraether lipid cores by liquid chromatography–tandem mass spectrometry, Journal of the American Society for Mass Spectrometry, 20, 51, 10.1016/j.jasms.2008.09.015
Knappy, 2011, The major lipid cores of the archaeon Ignisphaera aggregans: implications for the phylogeny and biosynthesis of glycerol monoalkyl glycerol tetraether isoprenoid lipids, Extremophiles, 15, 517, 10.1007/s00792-011-0382-3
Koga, 2005, Recent advances in structural research on ether lipids from archaea including comparative and physiological aspects, Bioscience Biotechnology Biochemistry, 69, 2019, 10.1271/bbb.69.2019
Koga, 2007, Biosynthesis of ether-type polar lipids in Archaea and evolutionary considerations, Microbiology and Molecular Biology Reviews, 71, 97, 10.1128/MMBR.00033-06
Koga, 1998, Did archaeal and bacterial cells arise independently from noncellular precursors? A hypothesis stating that the advent of membrane phospholipid with enantiomeric glycerophosphate backbones caused the separation of the two lines of descent, Journal of Molecular Evolution, 46, 54, 10.1007/PL00006283
Kohnen, 1992, Recognition of paleobiochemicals by a combined molecular sulphur and isotope geochemical approach, Science, 256, 358, 10.1126/science.256.5055.358
Könneke, 2005, Isolation of an autotrophic ammonia-oxidizing marine archaeon, Nature, 437, 543, 10.1038/nature03911
Könneke, 2012, Carbon isotope fractionation by the marine ammonia-oxidizing archaeon Nitrosopumilus maritimus, Organic Geochemistry, 48, 1, 10.1016/j.orggeochem.2012.04.007
Koopmans, 1996, Impact of dia- and catagenesis on sulphur and oxygen sequestration of biomarkers as revealed by artificial maturation of an immature sedimentary rock, Organic Geochemistry, 25, 391, 10.1016/S0146-6380(96)00144-1
Koopmans, 1999, A thermal and chemical degradation approach to decipher pristane and phytane precursors in sedimentary organic matter, Organic Geochemistry, 30, 1089, 10.1016/S0146-6380(99)00088-1
Kusch, 2010, Controls on the age of vascular plant biomarkers in Black Sea sediments, Geochimica et Cosmochimica Acta, 74, 7031, 10.1016/j.gca.2010.09.005
Kuwabara, 2005, Thermococcus coalescens sp. nov., a cell-fusing hyperthermophilic archaeon from Suiyo Seamount, International Journal of Systematic and Evolutionary Microbiology, 55, 2507, 10.1099/ijs.0.63432-0
Kuypers, 2001, Massive expansion of marine archaea during a mid-Cretaceous oceanic anoxic event, Science, 293, 92, 10.1126/science.1058424
Lai, 2007, Effect of growth temperature on ether lipid biochemistry in Archaeoglobus fulgidus, Extremophiles, 12, 271, 10.1007/s00792-007-0126-6
Lai, 2009, Reconstruction of the archaeal isoprenoid ether lipid biosynthesis pathway in Escherichia coli through digeranylgeranylglyceryl phosphate, Metabolic Engineering, 11, 184, 10.1016/j.ymben.2009.01.008
Langworthy, 1986, Archaebacterial ether lipids and chemotaxonomy, Systematic and Applied Microbiology, 7, 253, 10.1016/S0723-2020(86)80015-7
Langworthy, 1982, Lipids of Archaeabacteria. Zentralblatt für Bakteriologie Mikrobiologie und Hygiene: I, Arbeit Originale, C3, 228
Langworthy, 1983, Iso- and anteiso-branched glycerol diethers of the thermophilic anaerobe Thermodesulfotobacterium commune, Systematic and Applied Microbiology, 4, 1, 10.1016/S0723-2020(83)80029-0
Lanzotti, 1987, Complex lipids of Desulfurococcus mobilis, a sulfate-reducing archaebacterium, Biochimica et Biophysica Acta, 922, 95, 10.1016/0005-2760(87)90142-1
Lanzotti, 1989, Complex lipids of Pyrococcus and AN1, thermophilic members of archaebacteria belonging to Thermococcales, Biochimica et Biophysica Acta, 1004, 44, 10.1016/0005-2760(89)90210-5
Lattuati, 1998, Lipids of Thermococcus hydrothermalis, an archaea isolated from a deep-sea hydrothermal vent, Lipids, 33, 319, 10.1007/s11745-998-0211-0
Lee, 2008, A study of the alkenone, TEX86, and planktonic foraminifera in the Benguela Upwelling System: implications for past sea surface temperature estimates, Geochemistry Geophysics Geosystems, 9, Q10019, 10.1029/2008GC002056
Leider, 2010, Core-top calibration of the lipid-based U37K′ and TEX86 temperature proxies on the southern Italian shelf (SW Adriatic Sea, Gulf of Taranto), Earth and Planetary Science Letters, 300, 112, 10.1016/j.epsl.2010.09.042
Leininger, 2006, Archaea predominate among ammonia-oxidizing prokaryotes in soils, Nature, 442, 806, 10.1038/nature04983
Lengger, 2012, A comparison of extraction and work-up techniques for analysis of core and intact polar tetraether lipids from sedimentary environments, Organic Geochemistry, 47, 34, 10.1016/j.orggeochem.2012.02.009
Lengger, S.K., Hopmans, E.C., Reichart, G.-J., Nierop, K.G.J., Sinninghe Damsté, J.S., Schouten, S., in press. Distribution of core and intact polar glycerol dibiphytanyl glycerol tetraether lipids in the Arabian Sea Oxygen Minimum Zone. II: evidence for selective preservation and degradation in sediments and consequences for the TEX86. Geochimica et Cosmochimica Acta.
Lin, 2010, Intramolecular stable carbon isotopic analysis of archaeal glycosyl tetraether lipids, Rapid Communications in Mass Spectrometry, 24, 2817, 10.1002/rcm.4707
Ling Ho, 2011, Core top TEX86 values in the south and equatorial Pacific, Organic Geochemistry, 42, 94, 10.1016/j.orggeochem.2010.10.012
Lipp, 2009, Structural diversity and fate of intact polar lipids in marine sediments, Geochimica et Cosmochimica Acta, 73, 6816, 10.1016/j.gca.2009.08.003
Lipp, 2008, Significant contribution of Archaea to extant biomass in marine subsurface sediments, Nature, 454, 991, 10.1038/nature07174
Littler, 2011, High sea-surface temperatures during the Early Cretaceous Epoch, Nature Geoscience, 4, 169, 10.1038/ngeo1081
Liu, 2009, Global cooling during the Eocene–Oligocene climate transition, Science, 323, 1187, 10.1126/science.1166368
Liu, 2010, Identification of polar lipid precursors of the ubiquitous branched GDGT orphan lipids in a peat bog in Northern Germany, Organic Geochemistry, 41, 653, 10.1016/j.orggeochem.2010.04.004
Liu, 2011, Distribution of intact and core GDGTs in marine sediments, Organic Geochemistry, 42, 368, 10.1016/j.orggeochem.2011.02.003
Liu, 2012, Mono- and dihydroxyl glycerol dibiphytanyl glycerol tetraethers in marine sediments: identification of both core and intact polar lipid forms, Geochimica et Cosmochimica Acta, 89, 102, 10.1016/j.gca.2012.04.053
Liu, 2012, Isoprenoidal glycerol dialkanol diethers: a series of novel archaeal lipids in marine sediments, Organic Geochemistry, 43, 50, 10.1016/j.orggeochem.2011.11.002
Logemann, 2011, A laboratory experiment of intact polar lipid degradation in sandy sediments, Biogeosciences, 8, 2547, 10.5194/bg-8-2547-2011
Loomis, 2011, Distributions of branched GDGTs in soils from western Uganda and implications for a lacustrine paleothermometer, Organic Geochemistry, 42, 739, 10.1016/j.orggeochem.2011.06.004
Lopes dos Santos, 2010, Glacial–interglacial variability in Atlantic meridional overturning circulation and thermocline adjustments in the tropical North Atlantic, Earth and Planetary Science Letters, 300, 407, 10.1016/j.epsl.2010.10.030
Lutnaes, 2007, Structure elucidation of C80, C81 and C82 isoprenoid tetraacids responsible for naphthenate deposition in crude oil production, Organic and Biomolecular Chemistry, 5, 1873, 10.1039/b701462g
Macalady, 2004, Tetraether-linked membrane monolayers in Ferroplasma spp.: a key to survival in acid, Extremophiles, 8, 411, 10.1007/s00792-004-0404-5
MacGregor, 1997, Crenarchaeota in Lake Michigan sediment, Applied and Environmental Microbiology, 63, 1178, 10.1128/AEM.63.3.1178-1181.1997
Marteinsson, 1999, Thermococcus barophilus sp. nov., a new barophilic and hyperthermophilic archaeon isolated under high hydrostatic pressure from a deep-sea hydrothermal vent, International Journal of Systematic Bacteriology, 49, 351, 10.1099/00207713-49-2-351
Martz, 1983, Biomass measurement of methane forming bacteria in environmental samples, Journal of Microbiology Methods, 1, 53, 10.1016/0167-7012(83)90007-6
Massana, 1997, Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara Channel, Applied and Environmental Microbiology, 63, 50, 10.1128/AEM.63.1.50-56.1997
McClymont, 2012, Sea-surface temperature records of Termination 1 in the Gulf of California: challenges for seasonal and interannual analogues of tropical Pacific climate change, Paleoceanography, 27, 10.1029/2011PA002226
Ménot-Combes, 2012, A precise search for drastic temperature shifts of the past 40,000 years in southeastern Europe, Paleoceanography, 27
Ménot-Combes, 2006, Early reactivation of European rivers during the last deglaciation, Science, 313, 1623, 10.1126/science.1130511
Menzel, 2006, Membrane tetraether lipids of planktonic Crenarchaeota in Pliocene sapropels of the eastern Mediterranean Sea, Palaeogeography Palaeoclimatology Palaeoecology, 239, 1, 10.1016/j.palaeo.2006.01.002
Merbt, 2012, Differential photoinhibition of bacterial and archaeal ammonia oxidation, FEMS Microbiology Letters, 327, 41, 10.1111/j.1574-6968.2011.02457.x
Meunier-Christman, C., 1988. Géochimie Organique de Phosphates et Schistes Bitumineux Marocains: Etude du Processus de hosphatogénèse. PhD thesis, University of Strasbourg, pp. 133.
Michaelis, 1979, Molecular fossils of Archaeabacteria in kerogen, Natuurwissenschaften, 66, 402
Moldowan, 1979, Head-to-head linked isoprenoids in petroleum, Science, 204, 169, 10.1126/science.204.4389.169
Mollenhauer, 2007, Aging of marine organic matter during cross-shelf lateral transport in the Benguela upwelling system revealed by compound-specific radiocarbon dating, Geochemistry Geophysics Geosystems, 8, 10.1029/2007GC001603
Mollenhauer, 2008, Organic radiocarbon-based assessment of the preservation characteristics of crenarchaeol and alkenones from continental margin sediments, Organic Geochemistry, 39, 1039, 10.1016/j.orggeochem.2008.02.006
Morii, 1998, A novel ether core lipid with H-shaped C80-isoprenoid hydrocarbon chain from the hyperthermophilic methanogen Methanothermus fervidus, Biochimica et Biophysica Acta, 1390, 339, 10.1016/S0005-2760(97)00183-5
Müller, 1998, Calibration of the alkenone palaeotemperature index U37K′ based on core-tops from the eastern South Atlantic and the global ocean (60′N–60′S), Geochimica et Cosmochimica Acta, 62, 1757, 10.1016/S0016-7037(98)00097-0
Murae, 2002, Facile distinction of neutral and acidic tetraether lipids in archaea membrane by halogen atom adduct ions in electrospray ionization mass spectrometry, Journal of Mass Spectrometry, 37, 209, 10.1002/jms.276
Murray, 1998, Seasonal and spatial variability of bacterial and archaeal assemblages in the coastal waters near Anvers Island, Antarctica, Applied and Environmental Microbiology, 64, 2585, 10.1128/AEM.64.7.2585-2595.1998
Mutterlose, 2010, TEX86 and stable δ18O paleothermometry of early Cretaceous sediments: Implications for belemnite ecology and paleotemperature proxy application, Earth and Planetary Science Letters, 298, 286, 10.1016/j.epsl.2010.07.043
Naeher, 2012, Impact of recent lake eutrophication on microbial community changes as revealed by high resolution lipid biomarkers in Rotsee (Switzerland), Organic Geochemistry, 49, 86, 10.1016/j.orggeochem.2012.05.014
Nemoto, 2003, Characterization of the precursor of tetraether lipid biosynthesis in the thermoacidophilic archaeaon Thermoplasma acidophilum, Extremophiles, 7, 235, 10.1007/s00792-003-0315-x
Nichols, 1992, Unsaturated diether phospholipids in the Antarctic methanogen Methanococcoides burtonii, FEMS Microbiology Letters, 98, 205, 10.1111/j.1574-6968.1992.tb05515.x
Nichols, 1993, Analysis of archaeal phospholipid-derived diether and tetraether lipids by high-temperature capillary gas-chromatography, Journal of Microbiological Methods, 18, 1, 10.1016/0167-7012(93)90066-Q
Niemann, 2005, Methane emission and consumption at a North Sea gas seep (Tommeliten area), Biogeosciences, 2, 335, 10.5194/bg-2-335-2005
Niemann, 2012, Bacterial GDGTs in Holocene sediments and catchment soils of a high-Alpine lake: application of the MBT/CBT-paleothermometer, Climate of the Past, 8, 889, 10.5194/cp-8-889-2012
Nishihara, 1987, Structure determination of a quartet of novel tetraether lipids from Methanobacterium thermoautotrophicum, Journal of Biochemistry, 101, 1007, 10.1093/oxfordjournals.jbchem.a121942
Oba, 2006, Polar and neutral isopranyl glycerol ether lipids as biomarkers of archaea in near-surface sediments from the Nankai Trough, Organic Geochemistry, 37, 1643, 10.1016/j.orggeochem.2006.09.002
Ohkouchi, 2002, Spatial and temporal offsets between proxy records in a sediment drift, Science, 298, 1224, 10.1126/science.1075287
Oppermann, 2010, Soil microbial community changes as a result of long-term exposure to a natural CO2 vent, Geochimica et Cosmochimica Acta, 74, 2697, 10.1016/j.gca.2010.02.006
Ourisson, 1992, Hopanoids. 1 Geohopanoids: the most abundant natural products on Earth?, Accounts of Chemical Research, 25, 398, 10.1021/ar00021a003
Pancost, 2003, Carbon isotopic compositions of prokaryotic lipids as tracers of carbon cycling in diverse settings, Chemical Geology, 195, 29, 10.1016/S0009-2541(02)00387-X
Pancost, 2000, Δ13C values and radiocarbon dates of microbial biomarkers as tracers for carbon recycling in peat deposits, Geology, 28, 663, 10.1130/0091-7613(2000)28<663:CVARDO>2.0.CO;2
Pancost, 2001, Archaeal lipids in Mediterranean cold seeps: molecular proxies for anaerobic methane oxidation, Geochimica et Cosmochimica Acta, 65, 1611, 10.1016/S0016-7037(00)00562-7
Pancost, 2006, Composition and implications of diverse lipids in New Zealand hydrothermal sinters, Geobiology, 4, 71, 10.1111/j.1472-4669.2006.00069.x
Pancost, 2008, Kerogen-bound glycerol dialkyl tetraether lipids released by hydropyrolysis of marine sediments: a bias against incorporation of sedimentary organisms?, Organic Geochemistry, 39, 1359, 10.1016/j.orggeochem.2008.05.002
Pape, 2005, Lipid geochemistry of methane-seep-related Black Sea carbonates, Palaeogeography Palaeoclimatology Palaeoecology, 227, 31, 10.1016/j.palaeo.2005.04.030
Park, 2010, Cultivation of autotrophic ammonia-oxidizing archaea from marine sediments in co-culture with sulfur-oxidizing bacteria, Applied and Environmental Microbiology, 76, 7575, 10.1128/AEM.01478-10
Parkes, 1994, Deep bacterial biosphere in Pacific Ocean sediments, Nature, 371, 410, 10.1038/371410a0
Patwardhan, 1999, Efficient synthesis of 40- and 48-membered tetraether macrocyclic bisphosphocholines, Organic Letters, 1, 241, 10.1021/ol990567o
Pauly, 1986, Archaebacterial ether lipids: natural tracers of biogeochemical processes, Organic Geochemistry, 10, 859, 10.1016/S0146-6380(86)80023-7
Pearson, A., 2000. Biogeochemical Applications of Compound-Specific Radiocarbon Analysis. PhD Thesis, Massachusetts Institute of Technology/Woods Hole Oceanographic Institute, 347 pp.
Pearson, 2001, Origins of lipid biomarkers in Santa Monica Basin surface sediment: A case study using compound-specific Δ14C analysis, Geochimica et Cosmochimica Acta, 65, 3123, 10.1016/S0016-7037(01)00657-3
Pearson, 2004, Nonmarine crenarchaeol in Nevada hot springs, Applied and Environmental Microbiology, 70, 5229, 10.1128/AEM.70.9.5229-5237.2004
Pearson, 2007, Novel hopanoid cyclases from the environment, Environmental Microbiology, 9, 2175, 10.1111/j.1462-2920.2007.01331.x
Pearson, 2007, Stable warm tropical climate through the Eocene epoch, Geology, 35, 211, 10.1130/G23175A.1
Pearson, 2008, Factors controlling the distribution of archaeal tetraethers in terrestrial hot springs, Applied and Environmental Microbiology, 74, 3523, 10.1128/AEM.02450-07
Pearson, 2011, A lacustrine GDGT-temperature calibration from the Scandinavian Arctic to Antarctic: renewed potential for the application of GDGT-paleothermometry in lakes, Geochimica et Cosmochimica Acta, 75, 6225, 10.1016/j.gca.2011.07.042
Pease, 1992, Diphytanyl glycerol ether distributions in sediments of the Orca Basin, Geochimica et Cosmochimica Acta, 56, 3469, 10.1016/0016-7037(92)90391-U
Pease, 1998, Degradation of glyceryl ethers by hydrous and flash pyrolysis, Organic Geochemistry, 29, 979, 10.1016/S0146-6380(98)00047-3
Perevalova, 2010, Fervidicoccus fontis gen. nov., sp. nov., an anaerobic, thermophilic crenarchaeote from terrestrial hot springs, and proposal of Fervidicoccaceae fam. nov. and Fervidicoccales ord. nov, International Journal of Systematic and Evolutionary Microbiology, 60, 2082, 10.1099/ijs.0.019042-0
Peterse, 2009, Constraints on the application of the MBT/CBT paleothermometer in high latitude environments (Svalbard, Norway), Organic Geochemistry, 40, 692, 10.1016/j.orggeochem.2009.03.004
Peterse, 2009, Distribution of branched tetraether lipids in geothermally heated soils: implications for the MBT/CBT temperature proxy, Organic Geochemistry, 40, 201, 10.1016/j.orggeochem.2008.10.010
Peterse, 2009, Assessment of soil n-alkane δD and branched tetraether membrane lipid distributions as tools for paleoelevation reconstruction, Biogeosciences, 6, 2799, 10.5194/bg-6-2799-2009
Peterse, 2010, Influence of soil pH on the abundance and distribution of core and intact polar lipid-derived branched GDGTs in soil, Organic Geochemistry, 41, 1171, 10.1016/j.orggeochem.2010.07.004
Peterse, 2011, Identification and distribution of intact branched tetraether lipids in peat and soils, Organic Geochemistry, 42, 1007, 10.1016/j.orggeochem.2011.07.006
Peterse, 2011, Decoupled warming and monsoon precipitation in East Asia over the last deglaciation, Earth and Planetary Science Letters, 301, 256, 10.1016/j.epsl.2010.11.010
Peterse, F., van der Meer, J., Schouten, S., Weijers, J.W.H., Fierer, N., Jackson, R.B., Kim, J.-K., Sinninghe Damsté, J.S., in press. Revised calibration of the MBT–CBT paleotemperature proxy based on branched tetraether membrane lipids in surface soils. Geochimica et Cosmochimica Acta.
Pitcher, 2009, Separation of core and intact polar archaeal tetraether lipids using silica columns: insights into living and fossil biomass contributions, Organic Geochemistry, 40, 12, 10.1016/j.orggeochem.2008.09.008
Pitcher, 2009, In situ production of crenarchaeol in two California hot springs and surrounding soils, Applied and Environmental Microbiology, 75, 4443, 10.1128/AEM.02591-08
Pitcher, 2010, Crenarchaeol and its regioisomer dominate the membrane lipids of “Candidatus Nitrososphaera gargensis”, a thermophilic Group I.1b Crenarchaeote, The ISME Journal, 4, 542, 10.1038/ismej.2009.138
Pitcher, 2011, Distribution of core and intact polar tetraether lipids in enrichment cultures of Thaumarchaeota from marine sediments, Applied and Environmental Microbiology, 77, 3468, 10.1128/AEM.02758-10
Pitcher, 2011, Niche segregation of ammonia-oxidizing archaea and anammox bacteria in the Arabian Sea oxygen minimum zone, The ISME Journal, 5, 1896, 10.1038/ismej.2011.60
Pitcher, 2011, Crenarchaeol tracks winter blooms of planktonic, ammonia-oxidizing Thaumarchaeota in the coastal North Sea, Limnology and Oceanography, 56, 2308, 10.4319/lo.2011.56.6.2308
Popp, 1998, Effect of phytoplankton cell geometry on carbon isotopic fractionation, Geochimica et Cosmochimica Acta, 62, 69, 10.1016/S0016-7037(97)00333-5
Powers, 2004, Crenarchaeotal lipids in lake sediments: a new paleotemperature proxy for continental paleoclimate reconstruction?, Geology, 32, 613, 10.1130/G20434.1
Powers, 2005, Large temperature variability in the southern African tropics since the Last Glacial Maximum, Geophysical Research Letters, 32, L08706, 10.1029/2004GL022014
Powers, 2010, Applicability and calibration of the TEX86 paleothermometer in lakes, Organic Geochemistry, 41, 404, 10.1016/j.orggeochem.2009.11.009
Powers, 2011, Organic geochemical records of environmental variability in Lake Malawi (East Africa) during the last 700 years, Part I: the TEX86 temperature record, Palaeogeography Palaeoclimatology Palaeoecology, 303, 133, 10.1016/j.palaeo.2010.09.006
Pross, 2012, Persistent near-tropical warmth on the Antarctic continent during the early Eocene epoch, Nature, 488, 73, 10.1038/nature11300
Qui, 1998, Application of high-performance liquid chromatography/electrospray mass spectrometry for the characterization of membrane lipids in the haloalkaliphilic archaebacterium Natronobacterium magadii, Rapid Communications in Mass Spectrometry, 12, 939, 10.1002/(SICI)1097-0231(19980731)12:14<939::AID-RCM261>3.0.CO;2-F
Qui, 2000, Characterisation of membrane phospholipids and glycolipids from a halophilic archaebacterium by high-performance liquid chromatography/electrospray mass spectrometry, Rapid Communications in Mass Spectrometry, 14, 1586
Reysenbach, 2006, Isolation of a ubiquitous obligate thermoacidophilic archaeon from deep-sea hydrothermal vents, Nature, 442, 444, 10.1038/nature04921
Richey, 2010, Merging late Holocene molecular organic and foraminiferal-based geochemical records of sea surface temperature in the Gulf of Mexico, Paleoceanography, 26, PA1209, 10.1029/2010PA002000
Richnow, 1992, Structural investigations of sulphur-rich macromolecular oil fractions and a kerogen by sequential chemical degradation, Organic Geochemistry, 19, 351, 10.1016/0146-6380(92)90005-I
Rossel, 2008, Intact polar lipids of anaerobic methanotrophic archaea and associated bacteria, Organic Geochemistry, 39, 992, 10.1016/j.orggeochem.2008.02.021
Rossel, 2010, Factors controlling the distribution of anaerobic methanotrophic communities in marine environments: evidence from intact polar membrane lipids, Geochimica et Cosmochimica Acta, 75, 164, 10.1016/j.gca.2010.09.031
Rowland, 1990, Production of acyclic isoprenoid hydrocarbons by laboratory maturation of methanogenic bacteria, Organic Geochemistry, 15, 9, 10.1016/0146-6380(90)90181-X
Rueda, 2009, Comparison of instrumental and GDGT-based estimates of sea surface and air temperatures from the Skagerrak, Organic Geochemistry, 40, 287, 10.1016/j.orggeochem.2008.10.012
Rütters, 2002, Phospholipid analysis as a tool to study microbial communities, Journal of Microbiological Methods, 48, 149, 10.1016/S0167-7012(01)00319-0
Saito, 2010, Distribution of acyclic and cyclic biphytanediols in recent sediments from IODP Site C0001, Nankai Trough, Organic Geochemistry, 41, 1001, 10.1016/j.orggeochem.2010.05.007
Sangiorgi, 2008, A ∼25Million years gap in the central Arctic record at the Greenhouse–Icehouse transition: looking for clues, Paleoceanography, 23, PA1S04, 10.1029/2007PA001477
Sangiorgi, 2008, Middle Eocene cyclicity in the Central Arctic Ocean sediment record: orbital forcing and paleoenvironmental response, Paleoceanography, 23, PA1S08, 10.1029/2007PA001487
Santoro, 2008, Shifts in the relative abundance of ammonia oxidizing Bacteria and Archaea across physicochemical gradients in a subterranean estuary, Environmental Microbiology, 10, 1068, 10.1111/j.1462-2920.2007.01547.x
Schleper, 1995, Picrophilus gen-nov, fam-nov – a novel aerobic, heterotrophic, thermoacidophilic genus and family comprising archaea capable of growth around pH-0, Journal of Bacteriology, 177, 7050, 10.1128/jb.177.24.7050-7059.1995
Schmidt, 2010, Sources, transport, and partitioning of organic matter at a highly dynamic continental margin, Marine Chemistry, 118, 37, 10.1016/j.marchem.2009.10.003
Schoell, 1992, Carbon isotopic compositions of 28,30-bisnorhopanes and other biological markers in a Monterey crude oil, Geochimica et Cosmochimica Acta, 56, 1391, 10.1016/0016-7037(92)90070-Y
Schouten, 1993, Natural sulphurization of ketones and aldehydes: a key reaction in the formation of organic sulphur compounds, Geochimica et Cosmochimica Acta, 57, 5111, 10.1016/0016-7037(93)90613-2
Schouten, 1998, Structural identification, occurrence and fate of archaeal ether-bound acyclic and cyclic biphytanes and corresponding diols in sediments, Organic Geochemistry, 29, 1305, 10.1016/S0146-6380(98)00131-4
Schouten, 2000, Widespread occurrence of structurally diverse tetraether membrane lipids: evidence for the ubiquitous presence of low-temperature relatives of hyperthermophiles, Proceedings of the National Academy of Sciences USA, 97, 14421, 10.1073/pnas.97.26.14421
Schouten, 2001, Anaerobic methane oxidation in euxinic waters of the Black Sea is mediated by archaea, Organic Geochemistry, 32, 1277, 10.1016/S0146-6380(01)00110-3
Schouten, 2002, Distributional variations in marine crenarchaeotal membrane lipids: a new tool for reconstructing ancient sea water temperatures?, Earth and Planetary Science Letters, 204, 265, 10.1016/S0012-821X(02)00979-2
Schouten, 2003, Biogeochemical evidence for thermophilic archaea mediating the anaerobic oxidation of methane, Applied and Environmental Microbiology, 69, 1680, 10.1128/AEM.69.3.1680-1686.2003
Schouten, 2004, The effect of maturity and depositional redox conditions on archaeal tetraether lipid palaeothermometry, Organic Geochemistry, 35, 567, 10.1016/j.orggeochem.2004.01.012
Schouten, 2007, Improved analytical methodology of the TEX86 paleothermometry by high performance liquid chromatography/atmospheric pressure chemical ionization–mass spectrometry, Analytical Chemistry, 79, 2940, 10.1021/ac062339v
Schouten, 2007, Archaeal and bacterial glycerol dialkyl glycerol tetraether lipids in hot springs of Yellowstone National Park (USA), Applied and Environmental Microbiology, 73, 6181, 10.1128/AEM.00630-07
Schouten, 2007, Transport of terrestrial organic matter to the deep north Atlantic Ocean by ice rafting, Organic Geochemistry, 38, 1161, 10.1016/j.orggeochem.2007.02.012
Schouten, 2007, Towards the calibration of the TEX86 palaeothermometer for tropical sea surface temperatures in ancient greenhouse worlds, Organic Geochemistry, 38, 1537, 10.1016/j.orggeochem.2007.05.014
Schouten, 2008, Intact membrane lipids of “Candidatus Nitrosopumilus maritimus”, a cultivated representative of the cosmopolitan mesophilic Group I Crenarchaeota, Applied and Environmental Microbiology, 74, 2433, 10.1128/AEM.01709-07
Schouten, 2008, An unusual isoprenoid tetraether lipid in marine and lacustrine sediments, Organic Geochemistry, 39, 1033, 10.1016/j.orggeochem.2008.01.019
Schouten, 2008, Tetraether membrane lipids of “Candidatus Aciduliprofundum boonei”, a cultivated obligate thermoacidophilic euryarchaeote from deep-sea hydrothermal vents, Extremophiles, 12, 119, 10.1007/s00792-007-0111-0
Schouten, 2008, Onset of long term cooling of Greenland near the Eocene–Oligocene boundary as revealed by branched tetraether lipids, Geology, 36, 147, 10.1130/G24332A.1
Schouten, 2008, Comment on “Lipids of marine Archaea: patterns and provenance in the water-column and sediments” by Turich et al. (2007), Geochimica et Cosmochimica Acta, 72, 5432, 10.1016/j.gca.2008.03.028
Schouten, 2009, An interlaboratory study of TEX86 and BIT analysis using high performance liquid chromatography/mass spectrometry, Geochemistry, Geophysics, Geosystems, 10, Q03012, 10.1029/2008GC002221
Schouten, 2010, Fossilization and degradation of intact polar lipids in deep subsurface sediments: a theoretical approach, Geochimica et Cosmochimica Acta, 74, 3806, 10.1016/j.gca.2010.03.029
Schouten, S., Rijpstra, W.I.C., Schubert, C.J., Durisch-Kaiser, E., Sinninghe Damsté, J.S., in press-a. Distribution of glycerol dialkyl glycerol tetraether lipids in the water column of Lake Tanganyika. Organic Geochemistry.
Schouten, S., Pitcher, A., Hopmans, E.C., Villanueva, L., van Bleijswijk, J., Sinninghe Damsté, J.S., in press-b. Distribution of core and intact polar glycerol dibiphytanyl glycerol tetraether lipids in the Arabian Sea Oxygen Minimum Zone: I: Selective preservation and degradation in the water column and consequences for the TEX86. Geochimica et Cosmochimica Acta.
Schubotz, 2009, Detection of microbial biomass by intact membrane lipid analysis in the water column and surface sediments of the Black Sea, Environmental Microbiology, 11, 2720, 10.1111/j.1462-2920.2009.01999.x
Schubotz, 2011, Stable carbon isotopic compositions of intact polar lipids reveal complex carbon flow patterns among hydrocarbon degrading microbial communities at the Chapopote asphalt volcano, Geochimica et Cosmochimica Acta, 75, 4399, 10.1016/j.gca.2011.05.018
Seki, 2009, Large changes in seasonal sea ice distribution and productivity in the Sea of Okhotsk during the deglaciations, Geochemistry Geophysics Geosystems, 10, Q10007, 10.1029/2009GC002613
Shah, 2008, Origins of archaeal tetraether lipids in sediments: insights from radiocarbon analysis, Geochimica et Cosmochimica Acta, 72, 4577, 10.1016/j.gca.2008.06.021
Shevenell, 2011, Holocene Southern Ocean surface temperature variability west of the Antarctic Peninsula, Nature, 470, 250, 10.1038/nature09751
Shiau, 2011, Warm pool hydrological and terrestrial variability near southern Papua New Guinea over the past 50 kyrs, Geophysical Research Letters, 38, L00F01, 10.1029/2010GL045309
Shimada, 2002, Complete polar lipid composition of Thermoplasma acidophilum HO-62 determined by high-performance liquid chromatography with evaporative light-scattering detection, Journal of Bacteriology, 184, 556, 10.1128/JB.184.2.556-563.2002
Shimada, 2008, Effects of pH and temperature on the composition of polar lipids in Thermoplasma acidophilum HO-62, Journal of Bacteriology, 190, 5404, 10.1128/JB.00415-08
Shintani, 2011, Paleoenvironmental changes in the northern South China Sea over the past 28,000years: a study of TEX86-derived sea surface temperatures and terrestrial biomarkers, Journal of Asian Earth Sciences, 40, 1221, 10.1016/j.jseaes.2010.09.013
Sinninghe Damsté, 1988, Origin of organic sulphur compounds and sulphur-containing high molecular weight substances in sediments and immature crude oils, Organic Geochemistry, 13, 593, 10.1016/0146-6380(88)90079-4
Sinninghe Damsté, 2000, Newly discovered non-isoprenoid dialkyl diglycerol tetraether lipids in sediments, Journal of the Chemical Society, Chemical Communications, 23, 1683, 10.1039/b004517i
Sinninghe Damsté, 2002, Distribution of membrane lipids of planktonic Crenarchaeota in the Arabian Sea, Applied and Environmental Microbiology, 68, 2997, 10.1128/AEM.68.6.2997-3002.2002
Sinninghe Damsté, 2002, Crenarchaeol: the characteristic core glycerol dibiphytanyl glycerol tetraether membrane lipid of cosmopolitan pelagic crenarchaeota, Journal of Lipid Research, 43, 1641, 10.1194/jlr.M200148-JLR200
Sinninghe Damsté, 2002, The influence of oxic degradation on the sedimentary biomarker record II. Evidence from Arabian Sea sediments, Geochimica et Cosmochimica Acta, 66, 2737, 10.1016/S0016-7037(02)00865-7
Sinninghe Damsté, 2007, Structural characterization of diabolic acid-based tetraester, tetraether and mixed ether/ester, membrane-spanning lipids of bacteria from the order Thermotogales, Archives of Microbiology, 188, 629, 10.1007/s00203-007-0284-z
Sinninghe Damsté, 2008, Altitudinal shifts in the distribution of branched tetraether lipids in soils from Mt. Kilimanjaro (Tanzania): implications for the MBT/CBT continental palaeothermometer, Organic Geochemistry, 39, 1072, 10.1016/j.orggeochem.2007.11.011
Sinninghe Damsté, 2009, Fluxes and distribution of tetraether lipids in an equatorial African lake: constraints on the application of the TEX86 palaeothermometer and branched tetraether lipids in lacustrine settings, Geochimica et Cosmochimica Acta, 73, 4232, 10.1016/j.gca.2009.04.022
Sinninghe Damsté, 2010, A CO2 decrease-driven cooling and increased latitudinal temperature gradient during the mid-Cretaceous Oceanic Anoxic Event 2, Earth and Planetary Science Letters, 293, 97, 10.1016/j.epsl.2010.02.027
Sinninghe Damsté, 2011, 13,16-Dimethyl octacosanedioic acid (iso-diabolic acid): a common membrane-spanning lipid of Acidobacteria subdivisions 1 and 3, Applied and Environmental Microbiology, 77, 4147, 10.1128/AEM.00466-11
Sinninghe Damsté, 2012, Distribution of tetraether lipids in the 25-kyr sedimentary record of Lake Challa: extracting reliable TEX86 and MBT/CBT palaeotemperatures from an equatorial African lake, Quaternary Science Reviews, 50, 43, 10.1016/j.quascirev.2012.07.001
Sinninghe Damsté, 2012, Intact polar and core glycerol dibiphytanyl glycerol tetraether lipids of Group I.1a and I.1b Thaumarchaeota in soil, Applied and Environmental Microbiology, 78, 6866, 10.1128/AEM.01681-12
Sluijs, 2006, Subtropical Arctic Ocean temperatures during the Palaeocene–Eocene thermal maximum, Nature, 441, 610, 10.1038/nature04668
Sluijs, 2007, Environmental precursors to rapid light carbon injection at the Palaeocene/Eocene boundary, Nature, 450, 1218, 10.1038/nature06400
Sluijs, 2008, Eustatic variations during the Paleocene–Eocene greenhouse world, Paleoceanography, 23, PA4216, 10.1029/2008PA001615
Sluijs, 2008, Arctic Late Paleocene–Early Eocene paleoenvironments with special emphasis on the Paleocene–Eocene thermal maximum (Lomonosov Ridge, IODP Expedition 302), Paleoceanography, 23, PA1S11, 10.1029/2007PA001495
Sluijs, 2009, Warm and wet conditions in the Arctic region during the Eocene Thermal Maximum 2, Nature Geosciences, 2, 777, 10.1038/ngeo668
Sluijs, 2011, Southern Ocean warming, sea level and hydrological change during the Paleocene–Eocene thermal maximum, Climate of the Past, 7, 47, 10.5194/cp-7-47-2011
Smith, 2010, Comparison of lignin phenols and branched/isoprenoid tetraethers (BIT index) as indices of terrestrial organic matter in Doubtful Sound, Fiordland, New Zealand, Organic Geochemistry, 41, 281, 10.1016/j.orggeochem.2009.10.009
Smith, 2012, A re-evaluation of the use of branched GDGTs as terrestrial biomarkers: implications for the BIT Index, Geochimica et Cosmochimica Acta, 80, 14, 10.1016/j.gca.2011.11.025
Smittenberg, 2002, Rapid isolation of biomarkers for compound specific radiocarbon dating using high-performance liquid chromatography and flow injection analysis-atmospheric pressure chemical ionisation mass spectrometry, Journal of Chromatography A, 978, 129, 10.1016/S0021-9673(02)01427-9
Smittenberg, 2004, Compound-specific radiocarbon dating of the varved Holocene sedimentary record of Saanich Inlet, Canada, Paleoceanography, 19, PA2012, 10.1029/2003PA000927
Smittenberg, 2005, Pre- and post-industrial environmental changes as revealed by the biogeochemical sedimentary record of Drammensfjord, Norway, Marine Geology, 214, 177, 10.1016/j.margeo.2004.10.029
Soulet, 2011, A Black Sea “Lake” reservoir age evolution since the Last Glacial—hydrologic and climatic implications, Earth and Planetary Sciences, 308, 245, 10.1016/j.epsl.2011.06.002
Spang, 2010, Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota, Trends in Microbiology, 554, 331, 10.1016/j.tim.2010.06.003
Sprott, 1994, Tetraether lipids of Methanospirillum hungatei with head groups consisting of phospho-N,N-dimethylaminopentanetetrol, phospho-N,N,N-trimethylaminopentanetetrol, and carbohydrates, Biochimica et Biophysica Acta, 1214, 234, 10.1016/0005-2760(94)90069-8
Sprott, 1999, A structural comparison of the total polar lipids from the human archaea Methanobrevibacter smithii and Methanosphaera stadtmanae and its relevance to the adjuvant activities of their liposomes, Biochimica et Biophysica Acta, 1440, 275, 10.1016/S1388-1981(99)00130-4
Stadnitskaia, 2005, Biomarker and 16S rDNA evidence for anaerobic oxidation of methane and related carbonate precipitation in deep-sea mud volcanoes of the Sorokin Trough, Black Sea, Marine Geology, 217, 67, 10.1016/j.margeo.2005.02.023
Stadnitskaia, 2007, Lipid biomarkers in sediments of mud volcanoes from the Sorokin Trough, NE Black Sea: probable source strata for the erupted material, Organic Geochemistry, 38, 67, 10.1016/j.orggeochem.2006.08.012
Stadnitskaia, 2008, Carbonate formation by anaerobic oxidation of methane: Evidence from lipid biomarker and fossil 16S rDNA, Geochimica et Cosmochimica Acta, 72, 1824, 10.1016/j.gca.2008.01.020
Stadnitskaia, 2008, Application of lipid biomarkers to detect sources of organic matter in mud volcano deposits and post-eruptional methanotrophic processes in the Gulf of Cadiz, NE Atlantic, Marine Geology, 255, 1, 10.1016/j.margeo.2007.11.006
Strong, 2012, Organic matter distribution in the modern sediments of the Pearl River Estuary, Organic Geochemistry, 49, 68, 10.1016/j.orggeochem.2012.04.011
Sturt, 2004, Intact polar membrane lipids in prokaryotes and sediments deciphered by high-performance liquid chromatography/electrospray ionization multistage mass spectrometry – new biomarkers for biogeochemistry and microbial ecology, Rapid Communications in Mass Spectrometry, 18, 617, 10.1002/rcm.1378
Sugai, 2004, The core lipid composition of the 17 strains of hyperthermophilic archaea, Thermococcales, Journal of Oleo Science, 53, 41, 10.5650/jos.53.41
Sun, 2011, Distributions and temperature dependence of branched glycerol dialkyl glycerol tetraethers in recent lacustrine sediments from China and Nepal, Journal of Geophysical Research, 116, G01008, 10.1029/2010JG001365
Sun, 2011, Late Quaternary environmental change of Yellow River Basin: an organic geochemical record in Bohai Sea (North China), Organic Geochemistry, 42, 575, 10.1016/j.orggeochem.2011.04.011
Sutton, 2012, High temperature gas chromatography–time-of-flight-mass spectrometry (HTGC–ToF-MS) for high-boiling compounds, Journal of Chromatography A, 1243, 69, 10.1016/j.chroma.2012.04.044
Takai, 2000, Palaeococcus ferrophilus gen. nov., sp nov., a barophilic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney, International Journal of Systematic Evolutionary Microbiology, 50, 489, 10.1099/00207713-50-2-489
Takano, 2010, Sedimentary membrane lipids recycled by deep-sea benthic archaea, Nature Geoscience, 3, 858, 10.1038/ngeo983
Takayanagi, 1996, Sulfolobus hakonensis sp. nov., a novel species of acidothermophilic archaeon, International Journal of Systematic Bacteriology, 46, 377, 10.1099/00207713-46-2-377
Thiel, 2007, Biomarkers at the microscopic range: ToF-SIMS molecular imaging of Archaea-derived lipids in a microbial mat, Geobiology, 5, 413, 10.1111/j.1472-4669.2007.00119.x
Thurl, 1988, Lipids from the sulfur-dependent archaeabacterium Thermoproteus tenax, Biochimica et Biophysica Acta, 961, 253, 10.1016/0005-2760(88)90120-8
Tierney, 2009, Distributions of branched GDGTs in a tropical lake system: Implications for lacustrine application of the MBT/CBT paleoproxy, Organic Geochemistry, 40, 1032, 10.1016/j.orggeochem.2009.04.014
Tierney, 2008, Northern hemisphere controls on tropical southeast African climate during the past 60,000 years, Science, 322, 252, 10.1126/science.1160485
Tierney, 2010, Environmental controls on branched tetraether lipid distributions in tropical East African lake sediments: a new lacustrine paleothermometer?, Geochimica et Cosmochimica Acta, 74, 4902, 10.1016/j.gca.2010.06.002
Tierney, 2010, Late-twentieth-century warming in Lake Tanganyika unprecedented since AD 500, Nature Geoscience, 3, 422, 10.1038/ngeo865
Tierney, 2012, Core and intact polar glycerol dialkyl glycerol tetraethers (GDGTs) in Sand Pond, Warwick, Rhode Island (USA): Insights into the origin of lacustrine GDGTs, Geochimica et Cosmochimica Acta, 77, 561, 10.1016/j.gca.2011.10.018
Trincone, 1992, Distribution of complex and core lipids within new hyperthermophilic members of the Archaea domain, Systematic and Applied Microbiology, 15, 11, 10.1016/S0723-2020(11)80130-X
Trommer, 2009, Distribution of Crenarchaeotal tetraether membrane lipids in surface sediments from the Red Sea, Organic Geochemistry, 40, 724, 10.1016/j.orggeochem.2009.03.001
Trommer, 2010, Millennial scale variability in Red Sea circulation in response to Holocene insolation forcing, Paleoceanography, 25, PA3203, 10.1029/2009PA001826
Turich, 2011, Archaeal lipids record paleosalinity in hypersaline systems, Organic Geochemistry, 42, 1147
Turich, 2007, Lipids of marine Archaea: patterns and provenance in the water-column and sediments, Geochimica et Cosmochimica Acta, 71, 3272, 10.1016/j.gca.2007.04.013
Tyler, 2010, Assessing past temperature and soil pH estimated from bacterial tetraether membrane lipids: evidence from the recent lake sediments of Lochnar, Scotland, Journal of Geophysical Research, 115, G01015, 10.1029/2009JG001109
Uchikawa, 2010, Examining possible effects of seawater pH decline on foraminiferal stable isotopes during the Paleocene–Eocene thermal maximum, Paleoceanography, 25, PA2216, 10.1029/2009PA001864
Uda, 2001, Variation on molecular species of polar lipids from Thermoplasma acidophilum depends on growth temperature, Lipids, 36, 103, 10.1007/s11745-001-0914-2
Uda, 2004, Variation in molecular species of core lipids from the order Thermoplasmales strains depends on growth temperature, Journal of Oleo Science, 53, 399, 10.5650/jos.53.399
van Breugel, 2007, Synchronous negative carbon isotope shifts in marine and terrestrial biomarkers at the onset of the Aptian oceanic anoxic event-1a: evidence for the release of methane into the atmosphere, Paleoceanography, 22, PA1210, 10.1029/2006PA001341
van der Meer, 2001, Stable carbon isotope fractionations of the hyperthermophilic crenarchaeon Metallosphaera sedula, FEMS Microbiology Letters, 196, 67, 10.1016/S0378-1097(01)00038-6
van Dongen, 2007, Formation of iron sulfide nodules during anaerobic oxidation of methane, Geochimica et Cosmochimica Acta, 71, 5155, 10.1016/j.gca.2007.08.019
van Dongen, 2008, Contrasting lipid biomarker composition of terrestrial organic matter exported from across the Eurasian Arctic by the five great Russian Arctic rivers, Global Biogeochemical Cycles, 22, GB1011, 10.1029/2007GB002974
Vella, 1990, Ether-derived alkanes from sedimentary organic matter, Organic Geochemistry, 15, 209, 10.1016/0146-6380(90)90085-E
Ventura, 2007, Molecular evidence of Late Archean archaea and the presence of a subsurface hydrothermal biosphere, Proceedings of the National Academy of Sciences USA, 104, 14260, 10.1073/pnas.0610903104
Verschuren, 2009, Half-precessional dynamics of monsoon rainfall near the East African Equator, Nature, 462, 637, 10.1038/nature08520
Vetriani, 1998, Recovery and phylogenetic analysis of archaeal rRNA sequences from continental shelf sediments, FEMS Microbiology Letters, 161, 83, 10.1111/j.1574-6968.1998.tb12932.x
Völkl, 1993, Pyrobaculum aerophilum sp. nov., a novel nitrate-reducing hyperthermophilic archaeum, Applied and Environmental Microbiology, 59, 2918, 10.1128/AEM.59.9.2918-2926.1993
Volkman, 1994, C25 and C30 highly branched isoprenoid alkenes in laboratory cultures of two marine diatoms, Organic Geochemistry, 21, 407, 10.1016/0146-6380(94)90202-X
Wade, 2012, Multiproxy record of abrupt sea surface temperature cooling across the Eocene–Oligocene transition in the Gulf of Mexico, Geology, 40, 159, 10.1130/G32577.1
Wagner, 2008, Rapid warming and salinity changes of Cretaceous surface waters in the subtropical North Atlantic, Geology, 36, 203, 10.1130/G24523A.1
Wakeham, 2003, Archaea mediate anaerobic oxidation of methane in deep euxinic waters of the Black Sea, Geochimica et Cosmochimica Acta, 67, 1359, 10.1016/S0016-7037(02)01220-6
Walsh, 2008, Sources and transport of terrestrial organic matter in Vancouver Island fjords and the Vancouver–Washington Margin: a multiproxy approach using δ13Corg, lignin phenols, and the ether lipid BIT index, Limnology and Oceanography, 53, 1054, 10.4319/lo.2008.53.3.1054
Wei, 2011, Spatial variations in Archaeal lipids of surface water and core-top sediments in the South China Sea: implications for paleoclimate studies, Applied and Environmental Microbiology, 77, 7479, 10.1128/AEM.00580-11
Weijers, 2006, Occurrence and distribution of tetraether membrane in soils: implications for the use of the BIT index and the TEX86 SST proxy, Organic Geochemistry, 37, 1680, 10.1016/j.orggeochem.2006.07.018
Weijers, 2006, Membrane lipids of mesophilic anaerobic bacteria thriving in peats have typical archaeal traits, Environmental Microbiology, 8, 648, 10.1111/j.1462-2920.2005.00941.x
Weijers, 2007, Environmental controls on bacterial tetraether membrane lipid distribution in soils, Geochimica et Cosmochimica Acta, 71, 703, 10.1016/j.gca.2006.10.003
Weijers, 2007, Coupled thermal and hydrological evolution of tropical Africa over the last deglaciation, Science, 315, 1701, 10.1126/science.1138131
Weijers, 2007, Warm Arctic continents during the Palaeocene–Eocene thermal maximum, Earth and Planetary Science Letters, 261, 230, 10.1016/j.epsl.2007.06.033
Weijers, 2009, Constraints on the biological source(s) of the orphan branched tetraether membrane lipids, Geomicrobiology Journal, 26, 402, 10.1080/01490450902937293
Weijers, 2009, Disentangling marine, soil and plant organic carbon contributions to continental margin sediments, Geochimica et Cosmochimica Acta, 73, 119, 10.1016/j.gca.2008.10.016
Weijers, 2010, Carbon isotopic composition of branched tetraether membrane lipids in soils suggest a rapid turnover and a heterotrophic life style of their source organism(s), Biogeosciences, 7, 2959, 10.5194/bg-7-2959-2010
Weijers, 2011, Absence of seasonal patterns in MBT–CBT indices in mid-latitude soils, Geochimica et Cosmochimica Acta, 75, 3179, 10.1016/j.gca.2011.03.015
Weijers, 2011, Bacterial tetraether membrane lipids in peat and coal: testing the potential of the MBT–CBT temperature proxy for climate reconstruction, Organic Geochemistry, 42, 477, 10.1016/j.orggeochem.2011.03.013
Weijers, 2011, Biogeochemical controls on glycerol dialkyl glycerol tetraether lipid distributions in sediments characterized by diffusive methane flux, Geochemistry Geophysics Geosystems, 12, Q10010, 10.1029/2011GC003724
Werne, 2005, Mixed sources contribute to the molecular isotopic signature of methane-rich mud breccia sediments of Kazan mud volcano (eastern Mediterranean), Organic Geochemistry, 36, 13, 10.1016/j.orggeochem.2004.07.013
Wilson, 2001, Warm tropical ocean surface and global anoxia during the mid-Cretaceous period, Nature, 412, 425, 10.1038/35086553
Wilson, 2002, Testing the Cretaceous greenhouse hypothesis using glassy foraminiferal calcite from the core of the Turonian tropics on the Demerara Rise, Geology, 30, 607, 10.1130/0091-7613(2002)030<0607:TTCGHU>2.0.CO;2
Woltering, 2011, Late Pleistocene temperature history of Southeast Africa: a TEX86 temperature record from Lake Malawi, Palaeogeography Palaeoclimatology Palaeoecology, 303, 93, 10.1016/j.palaeo.2010.02.013
Woltering, 2012, Vertical and temporal variability in concentration and distribution of thaumarchaotal tetraether lipids in Lake Superior and the implications for the application of the TEX86 temperature proxy, Geochimica et Cosmochimica Acta, 87, 136, 10.1016/j.gca.2012.03.024
Wuchter, C.W., 2006. Ecology and Membrane Lipid Distribution of Marine Crenarchaeota: Implications for TEX86 Paleothermometry. PhD Thesis, University of Utrecht. <http://igitur-archive.library.uu.nl/dissertations/2006-0412-200011/full.pdf>.
Wuchter, 2003, Bicarbonate uptake by marine Crenarchaeota, FEMS Microbiology Letters, 219, 203, 10.1016/S0378-1097(03)00060-0
Wuchter, 2004, Temperature-dependent variation in the distribution of tetraether membrane lipids of marine Crenarchaeota: implications for TEX86 paleothermometry, Paleoceanography, 19, PA4028, 10.1029/2004PA001041
Wuchter, 2005, Temporal and spatial variation in tetraether membrane lipids of marine Crenarchaeota in particulate organic matter: implications for TEX86 paleothermometry, Paleoceanography, 20, PA3013, 10.1029/2004PA001110
Wuchter, 2006, Archaeal tetraether membrane lipid fluxes in the northeastern Pacific and the Arabian Sea: implications for TEX86 paleothermometry, Paleoceanography, 21, PA4208, 10.1029/2006PA001279
Wuchter, 2006, Archaeal nitrification in the ocean, Proceedings of the National Academy of Sciences USA, 103, 12317, 10.1073/pnas.0600756103
Xie, 2012, Microbial lipid records of highly alkaline deposits and enhanced aridity associated with significant uplift of the Tibetan Plateau in the Late Miocene, Geology, 40, 291, 10.1130/G32570.1
Yamamoto, 2009, Changes in terrestrial organic matter input to the Mendeleev Ridge, western Arctic Ocean, during the Late Quaternary, Global and Planetary Change, 68, 30, 10.1016/j.gloplacha.2009.03.012
Yamamoto, 2008, Late Pleistocene changes in terrestrial biomarkers in sediments from the central Arctic Ocean, Organic Geochemistry, 39, 754, 10.1016/j.orggeochem.2008.04.009
Yamamoto, M., Shimamoto, A., Fukuhara, T., Tanaka, Y., Ishizaka, J., in press. Glycerol dialkyl glycerol tetraethers and TEX86 index in sinking particles in the western North Pacific. Organic Geochemistry.
Yang, 2011, Occurrence of tetraether lipids in stalagmites: implications for sources and GDGT-based proxies, Organic Geochemistry, 42, 108, 10.1016/j.orggeochem.2010.11.006
Yang, 2012, Soil pH impact on microbial tetraether lipids and terrestrial input index (BIT) in China, Science China Earth Sciences, 55, 236, 10.1007/s11430-011-4295-x
Yokoi, 2012, Archaeal phospholipid biosynthetic pathway reconstructed in Escherichia coli, Archaea, 10.1155/2012/438931
Yoshinaga, 2011, Systematic fragmentation patterns of archaeal intact polar lipids by high-performance liquid chromatography/electrospray ionization ion–trap mass spectrometry, Rapid Communications in Mass Spectrometry, 25, 3563, 10.1002/rcm.5251
Zachos, 2001, Trends, rhythms, and aberrations in global climate 65Ma to present, Science, 292, 693, 10.1126/science.1059412
Zachos, 2006, Extreme warming of mid-latitude coastal ocean during the Paleocene–Eocene Thermal Maximum: inferences from TEX86 and isotope data, Geology, 34, 737, 10.1130/G22522.1
Zhang, 2003, Archaeal lipid biomarkers and isotopic evidence of anaerobic methane oxidation associated with gas hydrates in the Gulf of Mexico, Organic Geochemistry, 34, 827, 10.1016/S0146-6380(03)00003-2
Zhang, 2006, Thermophilic temperature optimum for crenarchaeol synthesis and its implication for archaeal evolution, Applied and Environmental Microbiology, 72, 4419, 10.1128/AEM.00191-06
Zhang, 2008, Global occurrence of archaeal amoA genes in terrestrial hot springs, Applied and Environmental Microbiology, 74, 6417, 10.1128/AEM.00843-08
Zhang, 2011, Methane Index: a tetraether archaeal lipid biomarker indicator for detecting the instability of marine gas hydrates, Earth and Planetary Science Letters, 307, 525, 10.1016/j.epsl.2011.05.031
Zhang, 2012, Production of branched tetraether lipids in the Lower Pearl River and Estuary: effects of extraction methods and impact on bGDGT proxies, Frontiers in Microbiology, 2, 274, 10.3389/fmicb.2011.00274
Zhao, 2011, Ammonia-oxidizing Archaea in Kamchatka hot springs, Geomicrobiology Journal, 28, 149, 10.1080/01490451003753076
Zhou, 2011, Branched glycerol dialkyl glycerol tetraethers and paleoenvironmental reconstruction in Zoigê peat sediments during the last 150 years, Chinese Science Bulletin, 56, 2456, 10.1007/s11434-011-4594-9
Zhu, 2011, Sources and distributions of tetraether lipids in surface sediments across a large river-dominated continental margin, Organic Geochemistry, 42, 376, 10.1016/j.orggeochem.2011.02.002
Zink, 2003, Intact phospholipids: microbial ‘life markers’ in marine deep subsurface sediments, Organic Geochemistry, 34, 755, 10.1016/S0146-6380(03)00041-X
Zink, 2008, Estimation of bacterial biomass in subsurface sediments by quantifying intact membrane phospholipids, Analytical and Bioanalytical Chemistry, 390, 885, 10.1007/s00216-007-1732-y
Zink, 2010, Application of bacterial glycerol dialkyl glycerol tetraethers (GDGTs) to develop modern and past temperature estimates from New Zealand lakes, Organic Geochemistry, 41, 1060, 10.1016/j.orggeochem.2010.03.004
Bligh, 1959, A rapid method of total lipid extraction and purification, Canadian Journal of Biochemistry and Physiology, 37, 911, 10.1139/o59-099
Huguet, 2010, Occurrence and distribution of non-extractable glycerol dialkyl glycerol tetraethers in temperate and tropical podzol profiles, Organic Geochemistry, 41, 833, 10.1016/j.orggeochem.2010.04.020