The loci of insect phenotypic evolution

Current Opinion in Insect Science - Tập 60 - Trang 101134 - 2023
Virginie Courtier-Orgogozo1
1Université Paris Cité, CNRS, Institut Jacques Monod, 75013 Paris, France

Tài liệu tham khảo

Sturtevant, 1920, Genetic studies on Drosophila simulans. I. Introduction. Hybrids with Drosophila melanogaster, Genetics, 5, 10.1093/genetics/5.5.488 Rubin, 1988, Drosophila melanogaster as an experimental organism, Science, 240, 1453, 10.1126/science.3131880 Telis, 2016, A bibliometric history of the journal genetics, Genetics, 204, 1337, 10.1534/genetics.116.196964 Li, 2019, Insect genomes: progress and challenges, Insect Mol Biol, 28, 739, 10.1111/imb.12599 Poelchau, 2015, The i5k Workspace@ NAL—enabling genomic data access, visualization and curation of arthropod genomes, Nucleic Acids Res, 43, D714, 10.1093/nar/gku983 Mei, 2022, InsectBase 2.0: a comprehensive gene resource for insects, Nucleic Acids Res, 50, D1040, 10.1093/nar/gkab1090 Courtier-Orgogozo, 2020, Gephebase, a database of genotype–phenotype relationships for natural and domesticated variation in Eukaryotes, Nucleic Acids Res, 48, D696, 10.1093/nar/gkz796 Elkin, 2023, Analysis of the genetic loci of pigment pattern evolution in vertebrates, Biol Rev, 98, 1250, 10.1111/brv.12952 Stern, 2008, The loci of evolution: How predictable is genetic evolution?, Evol Int J Org Evol, 62, 2155, 10.1111/j.1558-5646.2008.00450.x Feyereisen, 2015, Genotype to phenotype, the molecular and physiological dimensions of resistance in arthropods, Pest Biochem Physiol, 121, 61, 10.1016/j.pestbp.2015.01.004 Dong, 2014, Molecular biology of insect sodium channels and pyrethroid resistance, Insect Biochem Mol Biol, 50, 1, 10.1016/j.ibmb.2014.03.012 Nauen, 2022, The role of cytochrome P450s in insect toxicology and resistance, Annu Rev Entomol, 67, 105, 10.1146/annurev-ento-070621-061328 Jurat-Fuentes, 2021, Mechanisms of resistance to insecticidal proteins from Bacillus thuringiensis, Annu Rev Entomol, 66, 121, 10.1146/annurev-ento-052620-073348 McCulloch, 2022, Insect opsins and evo-devo: what have we learned in 25 years?, Philos Trans R Soc B, 377, 10.1098/rstb.2021.0288 Massey, 2016, The genetic basis of pigmentation differences within and between Drosophila species, Curr Top Dev Biol, 119, 27, 10.1016/bs.ctdb.2016.03.004 Stork, 2018, How many species of insects and other terrestrial arthropods are there on Earth, Annu Rev Entomol, 63, 31, 10.1146/annurev-ento-020117-043348 Gantz, 2018, Gene editing technologies and applications for insects, Curr Opin Insect Sci, 28, 66, 10.1016/j.cois.2018.05.006 Douris, 2020, Using CRISPR/Cas9 genome modification to understand the genetic basis of insecticide resistance: Drosophila and beyond, Pest Biochem Physiol, 167, 10.1016/j.pestbp.2020.104595 Jin, 2018, Dominant point mutation in a tetraspanin gene associated with field-evolved resistance of cotton bollworm to transgenic Bt cotton, Proc Natl Acad Sci USA, 115, 11760, 10.1073/pnas.1812138115 Guest, 2019, RDL A301S alone does not confer high levels of resistance to cyclodiene organochlorine or phenyl pyrazole insecticides in Plutella xylostella, Pest Biochem Physiol, 158, 32, 10.1016/j.pestbp.2019.04.005 Tong, 2022, High-resolution silkworm pan-genome provides genetic insights into artificial selection and ecological adaptation, Nat Commun, 13, 10.1038/s41467-022-33366-x Stern, 2009, Is genetic evolution predictable?, Science, 323, 746, 10.1126/science.1158997 Bass, 2011, Gene amplification and insecticide resistance, Pest Manag Sci, 67, 886, 10.1002/ps.2189 Bass, 2014, The evolution of insecticide resistance in the peach potato aphid, Myzus persicae, Insect Biochem Mol Biol, 51, 41, 10.1016/j.ibmb.2014.05.003 Martin, 2013, The Loci of repeated evolution: a catalog of genetic hotspots of phenotypic variation, Evol Int J Org Evol, 67, 1235 Singh, 2021, Global patterns in genomic diversity underpinning the evolution of insecticide resistance in the aphid crop pest Myzus persicae, Commun Biol, 4, 10.1038/s42003-021-02373-x Walsh, 2018, Multiple recombination events between two cytochrome P450 loci contribute to global pyrethroid resistance in Helicoverpa armigera, PLoS One, 13, 10.1371/journal.pone.0197760 Hawkins, 2019, The evolutionary origins of pesticide resistance, Biol Rev, 94, 135, 10.1111/brv.12440 Scott, 2019, Life and death at the voltage-sensitive sodium channel: evolution in response to insecticide use, Annu Rev Entomol, 64, 243, 10.1146/annurev-ento-011118-112420 Schmidt, 2010, Copy number variation and transposable elements feature in recent, ongoing adaptation at the Cyp6g1 locus, PLoS Genet, 6, 10.1371/journal.pgen.1000998 Stern, 2013, The structure and evolution of cis-regulatory regions: the shavenbaby story, Philos Trans R Soc Lond B Biol Sci, 368, 10.1098/rstb.2013.0028 Rebeiz, 2009, Stepwise modification of a modular enhancer underlies adaptation in a Drosophila population, Science, 326, 1663, 10.1126/science.1178357 Fan, 2020, Evidence for both sequential mutations and recombination in the evolution of kdr alleles in Aedes aegypti, PLoS Negl Trop Dis, 14, 10.1371/journal.pntd.0008154 Ando, 2019, Development and evolution of color patterns in ladybird beetles: a case study in Harmonia axyridis, Dev Growth Differ, 61, 73, 10.1111/dgd.12592 Gutiérrez-Valencia, 2021, The genomic architecture and evolutionary fates of supergenes, Genome Biol Evol, 13, 10.1093/gbe/evab057 Fuller, 2019, How chromosomal rearrangements shape adaptation and speciation: case studies in Drosophila pseudoobscura and its sibling species Drosophila persimilis, Mol Ecol, 28, 1283, 10.1111/mec.14923 Wang, 2022, The evolution and diversification of oakleaf butterflies, Cell, 185, 3138, 10.1016/j.cell.2022.06.042 Karasov, 2010, Evidence that adaptation in Drosophila is not limited by mutation at single sites, PLoS Genet, 6, 10.1371/journal.pgen.1000924 Liu, 2019, Changes throughout a genetic network mask the contribution of hox gene evolution, Curr Biol, 29, 2157, 10.1016/j.cub.2019.05.074 Rockman, 2012, The QTN program and the alleles that matter for evolution: all that’s gold does not glitter, Evol Int J Org Evol, 66, 1, 10.1111/j.1558-5646.2011.01486.x Bomblies, 2022, Genetics of adaptation, Proc Natl Acad Sci, 119, 10.1073/pnas.2122152119 Wray, 2013, Genomics and the evolution of phenotypic traits, Annu Rev Ecol Evol Syst, 44, 51, 10.1146/annurev-ecolsys-110512-135828 Loses, 2013, Evolutionary biology for the 21st century, PLoS Biol, 11