The interplay of processivity, substrate inhibition and a secondary substrate binding site of an insect exo-β-1,3-glucanase

Dixon, 1979 Ferreira, 2001, Purification, molecular cloning, and properties of a β-glycosidase isolated from midgut lumen of Tenebrio molitor (Coleoptera) larvae, Insect Biochem. Mol. Biol., 31, 1065, 10.1016/S0965-1748(01)00054-6 Robyt, 1967, Multiple attack hypothesis of alpha-amylase action — action of porcine pancreatic human salivary and aspergillus oryzae alpha-amylases, Arch. Biochem. Biophys., 122, 8, 10.1016/0003-9861(67)90118-X Bezukladnikov, 1986, A study of the pattern of action of endo-(1–3)-β-d-gucanases from marine bivalves on a polymer substrate labeled at the reducing end, Carb. Res., 152, 261, 10.1016/S0008-6215(00)90306-9 Medve, 1998, Hydrolysis of microcrystalline cellulose by cellobiohydrolase I and endoglucanase II from Trichoderma reseei: adsorption, sugar production patter, and synergism of the enzymes, Biotechnol. Bioeng., 59, 621, 10.1002/(SICI)1097-0290(19980905)59:5<621::AID-BIT13>3.0.CO;2-C Sorbotten, 2005, Degradation of chitosans with chitinase B from Serratia marcescens—Production of chito-oligosaccharides and insight into the enzyme processivity, FEBS J., 272, 538, 10.1111/j.1742-4658.2004.04495.x Michel, 2003, The structural bases of the processive degradation of iota-carrageenan, a main cell wall polysaccharide of red algae, J. Mol. Biol., 334, 421, 10.1016/j.jmb.2003.09.056 Benen, 1999, Kinetic characterization of Aspergillus niger N400 endopolygalacturonases I, II and C, Eur. J. Biochem., 259, 577, 10.1046/j.1432-1327.1999.00080.x Breyer, 2001, A structural basis for processivity, Prot. Sci., 10, 1699, 10.1110/ps.10301 Pages, 2001, Changing a single amino acid residue switches processive and non-processive behavior of Aspergillus niger endopolygalacturonase I and II, J. Biol. Chem., 276, 33652, 10.1074/jbc.M105770200 Irwin, 1998, Roles of the catalytic domain and two cellulose binding domains of Thermomonospora fusca E4 in cellulose hydrolysis, J. Bacteriol., 180, 1709, 10.1128/JB.180.7.1709-1714.1998 Koukiekolo, 2001, Mechanism of porcine pancreatic alpha-amylase—Inhibition of amylose and maltopentaose hydrolysis by alpha-, beta- and gamma-cyclodextrins, Eur. J. Biochem., 268, 841, 10.1046/j.1432-1327.2001.01950.x Allouch, 2004, Parallel substrate binding sites in a beta-agarose suggest a novel mode of action on double-helical agarose, Structure, 12, 623, 10.1016/j.str.2004.02.020 Kovalchuk, 2006, Purification, cDNA cloning and homology modeling of endo-1,3-beta-d-glucanase from scallop Mizuhopecten yessoensis, Comp. Biochem. Physiol., 143B, 473, 10.1016/j.cbpb.2005.12.024 Desseaux, 2002, Mechanism of porcine pancreatic alpha-amylase: inhibition of amylose and maltopentaose hydrolysis by various inhibitors, Biologia, 57, 163 Read, 1996, Analysis of the structural heterogeneity of laminarin by electrospray-ionisation-mass spectrometry, Carbohydr. Res., 281, 187, 10.1016/0008-6215(95)00350-9 Dubois, 1956, Colorimetric method for determination of sugars and related substances, Anal. Chem., 28, 350, 10.1021/ac60111a017 Bradford, 1976, A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding, Anal. Biochem., 72, 248, 10.1016/0003-2697(76)90527-3 Krystal, 1985, A method for quantitating nanogram amounts of soluble protein using the principle of silver binding, Anal. Biochem., 148, 451, 10.1016/0003-2697(85)90252-0 Noelting, 1948, Sur les enzymes amylolitiques: III. La beta-amilase: dosage d'activité et contrôle de l'absence d'alfa-amilase, Helv. Chim. Acta, 31, 286, 10.1002/hlca.19480310149 Baker, 1992, β-glucosidases in the rice weevil, Sitophilus oryzae: purification, properties, and activity levels in wheat- and legume-feeding strains, Insect Biochem. Mol. Biol., 22, 495, 10.1016/0965-1748(92)90146-6 Terra, 1979, Distribution of digestive enzymes among the endo and ectoperitrophic spaces and midgut cells of Rhynchosciara and its physiological significance, J. Insect Physiol., 25, 487, 10.1016/S0022-1910(79)80007-4 Dalqvist, 1968, Assay of intestinal disaccharidases, Anal. Biochem., 22, 99, 10.1016/0003-2697(68)90263-7 Laemmli, 1970, Cleavage of structural proteins during the assembly of the head of bacteriophage T4, Nature, 227, 680, 10.1038/227680a0 Blum, 1987, Improved silver staining of plant—proteins, RNA and DNA in polyacrylamide gels, Electrophoresis, 8, 93, 10.1002/elps.1150080203 Shapiro, 1967, Molecular weight estimation of polypeptide chains by electrophoresis in SDS-polyacrylamide gels, Biochem. Biophys. Res. Commun., 28, 815, 10.1016/0006-291X(67)90391-9 Genta, 2003, Action pattern, specificity, lytic activities, and physiological role of five digestive beta-glucanases isolated from Periplaneta americana, Insect Biochem. Mol Biol., 33, 1085, 10.1016/S0965-1748(03)00121-8 Terra, 1978, Physical properties and Tris inhibition of an insect trehalase and a thermodynamic approach to nature of its active site, Biochim. Biophys. Acta, 524, 131, 10.1016/0005-2744(78)90111-0 Sengupta, 2000, A note on the estimation of microbial glycosidase activities by dinitrosalicylic acid reagent, Appl. Microbiol. Biotechnol., 53, 732, 10.1007/s002530000327 Lambert, 1950, Rapid method for estimation of glycerol in fermentation solutions, Can. J. Res., Sect. B, Chem. Sci., 28, 83, 10.1139/cjr50b-013 Semenza, 1969, The configuration at the anomeric carbon of the reaction products of some digestive enzymes, Carboh. Res., 10, 417, 10.1016/S0008-6215(00)80902-7 Davies, 1997, Nomenclature for sugar-binding subsites in glycosyl hydrolyses, Biochem. J., 321, 557, 10.1042/bj3210557 Hiromi, 1973, Subsite affinities of glucoamylase: examination of the validity of the subsite theory, Biochim. Biophys. Acta, 302, 362, 10.1016/0005-2744(73)90164-2 Segel, 1975 Carraway, 1972, Carbodiimide modification of proteins, Meth. Enzymol., 25, 616, 10.1016/S0076-6879(72)25060-1 Miles, 1977, Modification of histidyl residues in proteins by diethylpyrocarbonate, Meth. Enzymol., 47, 431, 10.1016/0076-6879(77)47043-5 Riordan, 1972, Nitration with tetranitromethane, Meth. Enzymol., XXV, 515, 10.1016/S0076-6879(72)25048-0 Spande, 1967, Tryptophan involvement in the function of enzymes and protein hormones as determined by selective oxidation with N-bromosuccinimide, Meth. Enzymol., XI, 506, 10.1016/S0076-6879(67)11061-6 Takahashi, 1968, The reaction of phenylglyoxal with arginine residues in proteins, J. Biol. Chem., 243, 6171, 10.1016/S0021-9258(18)94475-3 Ferreira, 1990, Compartmentalization of the digestive process in Abracris flavolineata (Orthoptera: Acrididae) adults, Insect Biochem., 20, 267, 10.1016/0020-1790(90)90044-U Sperber, 1996, Field diet of the grasshopper Abracris dilecta Walker (Orthoptera, Acrididae), Rev. Bras. Zool., 13, 127, 10.1590/S0101-81751996000100012 Bacic, 1988, Structure and function of plant cell walls, vol. 14, 297 Fersht, 1999