The Colletotrichum dracaenophilum, C. magnum and C. orchidearum species complexes

Studies in Mycology - Tập 92 Số 1 - Trang 1-46 - 2019
Ulrike Damm1,2, Toyozo Sato3, A. Alizadeh4, J.Z. Groenewald5, P.W. Crous6,7,8,9,5
1ATCC: American Type Culture Collection, Virginia, USA; BCC: BIOTEC culture collection, Bangkok, Thailand;
2Senckenberg Museum of Natural History Görlitz, PF 300 154, 02806 Görlitz, Germany
3Genetic Resources Center, National Agriculture and Food Research Organization, Kannondai, Tsukuba, Ibaraki 305-8602, Japan;
4Department of Plant Protection, Faculty of Agriculture, Azarbaijan Shahid Madani University, Tabriz, Iran
5Westerdijk Fungal Biodiversity Institute, P.O. Box 85167, 3508 AD Utrecht, The Netherlands
6Department of Genetics, Biochemistry and Microbiology,
7Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
8Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands
9Wageningen University and Research Centre (WUR),

Tóm tắt

Although Glomerella glycines, Colletotrichum magnum and C. orchidearum are known as causal agents of anthracnose of soybean, Cucurbitaceae and Orchidaceae, respectively, their taxonomy remains unresolved. In preliminary analyses based on ITS, strains of these species appear basal in Colletotrichum phylogenies, clustering close to C. cliviae, C. brevisporum and other recently described species from tropical or subtropical regions. Phylogenetic analyses (ITS, GAPDH, CHS-1, HIS3, ACT, TUB2) of 102 strains previously identified as Ga. glycines, C. magnum and C. orchidearum as well as other related strains from different culture collections and studies placed these taxa in three species complexes, and distinguished at least 24 species, including 11 new species. In this study, C. magnum, C. orchidearum and C. piperis were epitypified and their taxonomy resolved, while C. cliviicola was proposed as a new name for C. cliviae. Furthermore, a sexual morph was observed for C. yunnanense, while C. brevisporum, C. cliviicola and C. tropicicola were reported from new hosts or countries. Regarding their conidial morphology, species in the C. dracaenophilum, C. magnum and C. orchidearum species complexes are reminiscent of C. gloeosporioides or C. boninense s. lat., and were likely to be confused with them in the past.

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