The effect of natamycin on the transcriptome of conidia of Aspergillus niger

Aguilar-Osorio, 2010, Spatial and developmental differentiation of mannitol dehydrogenase and mannitol-1-phosphate dehydrogenase in Aspergillus niger, Eukaryotic Cell, 9, 1398, 10.1128/EC.00363-09 Basson, 1986, Saccharomyces cerevisiae contains two fundamental genes encoding 3-hydroxy-3-methylglutaryl-coenzyme A reductase, Proceedings of the National Academy of Sciences, 83, 5563, 10.1073/pnas.83.15.5563 Brik, 1981, Natamycin, vol. 10, 514 Bos, 1988, Genetic analysis and the construction of master strains for assignment of genes to six linkage groups in Aspergillus niger, Current Genetics, 14, 437, 10.1007/BF00521266 Browne, 2002, Plant desiccation gene found in a nematode, Nature, 416, 38, 10.1038/416038a Calvo, 2001, Genetic connection between fatty acid metabolism and sporulation in Aspergillus nidulans, Journal of Biological Chemistry, 276, 25766, 10.1074/jbc.M100732200 Chakrabortee, 2007, Hydrophilic protein associated with desiccation tolerance exhibits broad protein stabilization function, Proceedings of the National Academy of Sciences, 104, 18073, 10.1073/pnas.0706964104 Chang, 2004, Deletion of the Δ12–oleic acid desaturase gene of a nonaflatoxigenic Aspergillus parasiticus field isolate affects conidiation and sclerotial development, Journal of Applied Microbiology, 97, 1178, 10.1111/j.1365-2672.2004.02424.x Chitarra, 2004, Germination of Penicillium paneum conidia is regulated by a volatile self–inhibitor, Applied and Environmental Microbiology, 70, 2823, 10.1128/AEM.70.5.2823-2829.2004 Chitarra, 2005, 1-Octen-3-ol has mild effects on membrane permeability, respiration and intracellular pH, but blocks germination and changes the protein composition of Penicillium paneum conidia, FEMS Microbiology Ecology, 54, 67, 10.1016/j.femsec.2005.02.013 D'Enfert, 1997, Molecular characterization of the Aspergillus nidulans treA gene encoding an acid trehalase required for growth on trehalase, Molecular Microbiology, 24, 203, 10.1046/j.1365-2958.1997.3131693.x Da Silva Ferreira, 2005, The ergosterol biosynthesis pathway, transporter genes, and azole resistance in Aspergillus fumigatus, Medical Mycology, 43, S313, 10.1080/13693780400029114 Dijksterhuis, 2007, High viscosity and anisotropy characterize the cytoplasm of fungal dormant stress–resistant spores, Eukaryotic Cell, 6, 157, 10.1128/EC.00247-06 Eastmond, 2001, Re-examining the role of glyoxylate cycle in oilseeds, Trends in Plant Sciences, 6, 72, 10.1016/S1360-1385(00)01835-5 Edgar, 2002, Gene Expression Omnibus: NCBI gene expression and hybridization array data repository, Nucleic Acids Research, 30, 207, 10.1093/nar/30.1.207 Fröhlich, 2009, A genome-wide screen for genes affecting eisosomes reveals Nce102 function in sphingolipid signalling, Journal of Cell Biology, 185, 1227, 10.1083/jcb.200811081 Heese-Peck, 2002, Multiple functions of sterols in yeast endocytosis, Molecular Biology of the Cell, 13, 2664, 10.1091/mbc.E02-04-0186 Jin, 2008, Ergosterol promotes pheromone signaling and plasma membrane fusion in mating yeast, Journal of Cell Biology, 180, 813, 10.1083/jcb.200705076 Köhli, 2008, Growth-speed-correlated localization of exocyst and polarisome components in growth zones of Ashbya gossypii hyphal tips, Journal of Cell Science, 121, 3878, 10.1242/jcs.033852 van Leeuwen, 2008, Filipin is a reliable in situ marker of ergosterol in the plasma membrane of germinating conidia (spores) of Penicillium discolor and stains intensively at the site of germ tube formation, Journal of Microbiological Methods, 74, 64, 10.1016/j.mimet.2008.04.001 van Leeuwen, 2009, The polyene antibiotics nystatin and filipin disrupt the plasma membrane; whereas natamycin inhibits endocytosis in germinating conidia of Penicillium discolor, Journal of Applied Microbiology, 106, 1908, 10.1111/j.1365-2672.2009.04165.x van Leeuwen, 2010, Water– and air–distributed conidia differ in sterol content and cytoplasmic microviscosity, Applied and Environmental Microbiology, 76, 366, 10.1128/AEM.01632-09 van Leeuwen, 2013, Germination of conidia of Aspergillus niger is accompanied by major changes in RNA profiles, Studies in Mycology, 74, 59, 10.3114/sim0009 Liu, 2005, Genome-wide expression profiles of the response to azole, polyene, echinocandin, and pyrimidine antifungal agents in Candida albicans, Antimicrobial Agents and Chemotherapy, 49, 2226, 10.1128/AAC.49.6.2226-2236.2005 Loibl, 2010, C Terminus of Nce102 determines the structure and function of microdomains in the Saccharomyces cerevisiae plasma membrane, Eukaryotic Cell, 9, 1184, 10.1128/EC.00006-10 Malinska, 2004, Distribution of Can1p into stable domains reflects lateral protein segregation within the plasma membrane of living S. cerevisiae cells, Journal of Cell Science, 117, 6031, 10.1242/jcs.01493 Martin, 2004, Lipid raft polarization contributes to hyphal growth in Candida albicans, Eukaryotic Cell, 3, 675, 10.1128/EC.3.3.675-684.2004 Mysyakina, 2007, The role of sterols in morphogenetic processes and dimorphism in fungi, Microbiology, 76, 1, 10.1134/S0026261707010018 Onyewu, 2003, Ergosterol biosynthesis inhibitors become fungicidal when combined with calcineurin inhibitors against Candida albicans, Candida glabatra, and Candida krusei, Antimicrobial Agents and Chemotherapy, 47, 956, 10.1128/AAC.47.3.956-964.2003 Plumridge, 2004, The weak acid preservative sorbic acid inhibits conidial germination and mycelial growth of Aspergillus niger through intracellular acidification, Applied and Environmental Microbiology, 70, 3506, 10.1128/AEM.70.6.3506-3511.2004 Ruijter, 2003, Mannitol is required for stress tolerance in Aspergillus niger conidiospores, Eukaryotic Cell, 2, 690, 10.1128/EC.2.4.690-698.2003 Sales, 2000, The LEA-like protein HSP 12 in Saccharomyces cerevisiea has a plasma membrane location and protects membranes against desiccation and ethanol-induced stress, Biochimical et Biophysica Acta, 1463, 267, 10.1016/S0005-2736(99)00215-1 Stark, 2007, Cheese and fermented sausages, 319 Subramanian, 2004, The Sec1/Munc18 protein, Vps33p, functions at the endosome and the vacuole of Saccharomyces cerevisiea, Molecular Biology of the Cell, 15, 2593, 10.1091/mbc.E03-10-0767 Sugui, 2008, Genes differentially expressed in conidia and hyphae of Aspergillus fumigatus upon exposure to human neutrophils, PLoS ONE, 3, e2655, 10.1371/journal.pone.0002655 Upton, 2007, Role of the methylcitrate cycle in propionate metabolism and detoxification in Mycobacterium smegmatis, Microbiology, 153, 3973, 10.1099/mic.0.2007/011726-0 Vangelatos, 2010, Eisosome organization in the filamentous ascomycete Aspergillus nidulans, Eukaryotic Cell, 9, 1441, 10.1128/EC.00087-10 Wachtler, 2003, Sterol–rich membrane domains in the fission yeast Schizosaccharomyces pombe, Journal of Cell Science, 116, 867, 10.1242/jcs.00299 Walther, 2006, Eisosomes mark static sites of endocytosis, Nature, 439, 998, 10.1038/nature04472 Weiß, 2008, ESCRT–III protein Snf7 mediates high–level expression of the SUC2 gene via the Rim101 pathway, Eukaryotic Cell, 7, 1888, 10.1128/EC.00194-08 te Welscher, 2008, Natamycin blocks fungal growth by binding specifically to ergosterol without permeabilizing the membrane, Journal of Biological Chemistry, 283, 6393, 10.1074/jbc.M707821200 te Welscher, 2010, Natamycin inhibits vacuole fusion at the priming phase via a specific interaction with ergosterol, Antimicrobial Agents and Chemotherapy, 54, 2618, 10.1128/AAC.01794-09 te Welscher, 2012, Polyene antibiotic that inhibits membrane transport proteins, Proceedings of the National Academy of Sciences, 109, 11156, 10.1073/pnas.1203375109 Wilson, 2004, Characterization of the Aspergillus parasiticus Δ12–desaturase gene: a role for lipid metabolism in the Aspergillus–seed interaction, Microbiology, 150, 2881, 10.1099/mic.0.27207-0 Wong Sak Hoi, 2011, A novel family of dehydrin–like proteins is involved in stress response in the human fungal pathogen Aspergillus fumigatus, Molecular Biology of the Cell, 22, 1896, 10.1091/mbc.E10-11-0914 Zhang, 2002, Response of gene expression in Saccharomyces cerevisiae to amphotericin B and nystatin measured by microarrays, Journal of Antimicrobial Chemotherapy, 49, 905, 10.1093/jac/dkf001 Russell, 1975, Polyene sensitivity during germination of conidia of Aspergillus fumigatus, Journal of General Microbiology, 87, 351, 10.1099/00221287-87-2-351 Russell, 1977, Sterol metabolism during germination of conidia of Aspergillus fumigatus, Journal of General Microbiology, 101, 197, 10.1099/00221287-101-2-197