The dynamic mechanical properties of cellularised aggregates

Davidson, 2004, Assembly and remodeling of the fibrillar fibronectin extracellular matrix during gastrulation and neurulation in Xenopus laevis, Dev Dyn, 231, 888, 10.1002/dvdy.20217 Davidson, 2006, Integrin α5β1 and fibronectin regulate polarized cell protrusions required for Xenopus convergence and extension, Curr Biol, 16, 833, 10.1016/j.cub.2006.03.038 George, 1993, Defects in mesoderm, neural tube and vascular development in mouse embryos lacking fibronectin, Development, 119, 1079, 10.1242/dev.119.4.1079 Leptin, 1989, The function of PS integrins during Drosophila embryogenesis, Cell, 56, 401, 10.1016/0092-8674(89)90243-2 Philipps, 1978, Embryonic tissues as elastoviscous liquids. 1. Rapid and slow shape changes in centrifuged cell aggregates, J Cell Sci, 30, 1, 10.1242/jcs.30.1.1 Forgacs, 1998, Viscoelastic properties of living embryonic tissues: a quantitative study, Biophys J, 74, 2227, 10.1016/S0006-3495(98)77932-9 Marmottant, 2009, The role of fluctuations and stress on the effective viscosity of cell aggregates, Proc Natl Acad Sci U S A, 106, 17271, 10.1073/pnas.0902085106 Guevorkian, 2010, Aspiration of biological viscoelastic drops, Phys Rev Lett, 104, 1, 10.1103/PhysRevLett.104.218101 Bonnet, 2012, Mechanical state, material properties and continuous description of an epithelial tissue, J R Soc Interface, 9, 2614, 10.1098/rsif.2012.0263 Harris, 2012, Characterizing the mechanics of cultured cell monolayers, Proc Natl Acad Sci, 109, 16449, 10.1073/pnas.1213301109 Guillot, 2013, Mechanics of epithelial tissue, Science, 340, 1185, 10.1126/science.1235249 Brodland, 2004, Mechanical effects of cell anisotropy on epithelia, Comput Methods Biomech Biomed Eng, 7, 91, 10.1080/1025584042000209369 Gonzalez-Rodriguez, 2013, Detachment and fracture of cellular aggregates, Soft Matter, 9, 2282, 10.1039/c2sm26648b Janmey, 2008, Rheology, Curr Biol, 18, 639, 10.1016/j.cub.2008.05.001 Tlili, 2015, Mechanical formalism for tissue dynamics, Eur Phys J E, 6, 23 Fabry, 2001, Scaling the microrheology of living cells, Phys Rev Lett, 87, 1, 10.1103/PhysRevLett.87.148102 Oliver, 2010, Remodeling of integrated contractile tissues and its dependence on strain-rate amplitude, Phys Rev Lett, 105, 1, 10.1103/PhysRevLett.105.158102 Fletcher, 2010, Cell mechanics and the cytoskeleton, Nature, 463, 485, 10.1038/nature08908 Bausch, 2006, A bottom-up approach to cell mechanics, Nat Phys, 2, 231, 10.1038/nphys260 Sato, 2015, Micropipette aspiration of cultured bovine aortic endothelial cells exposed to shear stress, Arteriosclerosis, 7, 276, 10.1161/01.ATV.7.3.276 Hoffman, 2009, Cell mechanics: dissecting the physical responses of cells to force, Annu Rev Biomed Eng, 11, 259, 10.1146/annurev.bioeng.10.061807.160511 Fritzsche, 2013, Analysis of turnover dynamics of the submembranous actin cortex, Mol Biol Cell, 24, 757, 10.1091/mbc.E12-06-0485 Mukhina, 2007, α-Actinin is required for tightly regulated remodeling of the actin cortical network during cytokinesis, Dev Cell, 13, 554, 10.1016/j.devcel.2007.08.003 Srivastava, 2015, Cytokinesis: robust cell shape regulation, Semin Cell Dev Biol Hiraiwa, 2016, Role of turnover in active stress generation in a filament network, Phys Rev Lett, 116, 188101, 10.1103/PhysRevLett.116.188101 Prost, 2015, Active gel physics, Nat Phys, 11, 131, 10.1038/nphys3224 Machado, 2015, Emergent material properties of developing epithelial tissues, BMC Biol, 13, 98, 10.1186/s12915-015-0200-y Salbreux, 2012, Actin cortex mechanics and cellular morphogenesis, Trends Cell Biol, 22, 536, 10.1016/j.tcb.2012.07.001 Martin, 2009, Pulsed contractions of an actin–myosin network drive apical constriction, Nature, 457, 495, 10.1038/nature07522 Heisenberg, 2013, Forces in tissue morphogenesis and patterning, Cell, 153 Ramms, 2013, Keratins as the main component for the mechanical integrity of keratinocytes, Proc Natl Acad Sci U S A, 110, 18513, 10.1073/pnas.1313491110 Seltmann, 2013, Keratins significantly contribute to cell stiffness and impact invasive behavior, Proc Natl Acad Sci U S A, 110, 18507, 10.1073/pnas.1310493110 Eckes, 1998, Impaired mechanical stability, migration and contractile capacity in vimentin-deficient fibroblasts, J Cell Sci, 111, 1897, 10.1242/jcs.111.13.1897 Wang, 2000, Contribution of intermediate filaments to cell stiffness, stiffening, and growth, Am J Physiol Cell Physiol, 279, C188, 10.1152/ajpcell.2000.279.1.C188 Fudge, 2009, From ultra-soft slime to hard α-keratins: the many lives of intermediate filaments, Integr Comp Biol, 49, 32, 10.1093/icb/icp007 Janmey, 1991, Viscoelastic properties of vimentin compared with other filamentous biopolymer networks, J Cell Biol, 113, 155, 10.1083/jcb.113.1.155 Kölsch, 2010, The keratin-filament cycle of assembly and disassembly, J Cell Sci, 123, 2266, 10.1242/jcs.068080 Brangwynne, 2006, Microtubules can bear enhanced compressive loads in living cells because of lateral reinforcement, J Cell Biol, 173, 733, 10.1083/jcb.200601060 Zhou, 2010, Macroscopic stiffening of embryonic tissues via microtubules, RhoGEF and the assembly of contractile bundles of actomyosin, Development, 137, 2785, 10.1242/dev.045997 Kollmannsberger, 2011, Linear and nonlinear rheology of living cells, Annu Rev Mater Res, 41, 75, 10.1146/annurev-matsci-062910-100351 Moeendarbary, 2013, The cytoplasm of living cells behaves as a poroelastic material, Nat Mater, 12, 253, 10.1038/nmat3517 Delarue, 2014, Stress distributions and cell flows in a growing cell aggregate, Interface Focus, 10.1098/rsfs.2014.0033 Harris, 2010, Adherens junctions: from molecules to morphogenesis, Nat Rev Mol Cell Biol, 11, 502, 10.1038/nrm2927 Gumbiner, 2000, Regulation of cadherin activity, J Cell Biol, 148, 403, 10.1083/jcb.148.3.399 Borghi, 2012, E-cadherin is under constitutive actomyosin-generated tension that is increased at cell–cell contacts upon externally applied stretch, Proc Natl Acad Sci U S A, 109, 12568, 10.1073/pnas.1204390109 Icard-Arcizet, 2008, Cell stiffening in response to external stress is correlated to actin recruitment, Biophys J, 94, 2906, 10.1529/biophysj.107.118265 Guillot, 2013, Mechanics of epithelial tissue homeostasis and morphogenesis, Science, 340, 1185, 10.1126/science.1235249 Heisenberg, 2013, Forces in tissue morphogenesis and patterning, Cell, 153, 948, 10.1016/j.cell.2013.05.008 Johnson, 2014, Desmosomes: regulators of cellular signaling and adhesion in epidermal health and disease, Cold Spring Harb Perspect Med, 4, a015297, 10.1101/cshperspect.a015297 Gloushankova, 2003, Continual assembly of desmosomes within stable intercellular contacts of epithelial A-431 cells, Cell Tissue Res, 314, 399, 10.1007/s00441-003-0812-3 Harris, 2014, Formation of adherens junctions leads to the emergence of a tissue-level tension in epithelial monolayers, J Cell Sci, 10.1242/jcs.142349 Huen, 2002, Intermediate filament-membrane attachments function synergistically with actin-dependent contacts to regulate intercellular adhesive strength, J Cell Biol, 159, 1005, 10.1083/jcb.200206098 Ranft, 2010, Fluidization of tissues by cell division and apoptosis, Proc Natl Acad Sci U S A, 107, 20863, 10.1073/pnas.1011086107 Wyatt, 2016, A question of time: tissue adaptation to mechanical forces, Curr Opin Cell Biol, 38, 68, 10.1016/j.ceb.2016.02.012 Brodland, 2015, How computational models can help unlock biological systems, Semin Cell Dev Biol, 47–48, 62, 10.1016/j.semcdb.2015.07.001 Mirams, 2013, Chaste: an open source C++ library for computational physiology and biology, PLoS Comput Biol, 9 Swat, 2012, Multi-scale modeling of tissues using CompuCell3D, Methods Cell Biol, 110, 325, 10.1016/B978-0-12-388403-9.00013-8 Resasco, 2012, Virtual cell: computational tools for modeling in cell biology, Wiley Interdiscip Rev Syst Biol Med, 4, 129, 10.1002/wsbm.165 Davis, 2015, Inter-cellular forces orchestrate contact inhibition of locomotion, Cell, 161, 361, 10.1016/j.cell.2015.02.015 Löber, 2015, Collisions of deformable cells lead to collective migration, Sci Rep, 5 Deforet, 2014, Emergence of collective modes and tri-dimensional structures from epithelial confinement, Nat Commun, 5, 3747, 10.1038/ncomms4747 Palsson, 2000, A model for individual and collective cell movement in Dictyostelium discoideum, Proc Natl Acad Sci U S A, 97, 10448, 10.1073/pnas.97.19.10448 Garcia, 2015, Physics of active jamming during collective cellular motion in a monolayer, Proc Natl Acad Sci U S A, 112, 15314, 10.1073/pnas.1510973112 Czirok, 2015, Cell resolved, multiparticle model of plastic tissue deformations and morphogenesis, Phys Biol, 12, 16005, 10.1088/1478-3975/12/1/016005 Podewitz, 2015, Tissue homeostasis: a tensile state, Europhys Lett, 109, 58005, 10.1209/0295-5075/109/58005 Townes, 1955, Directed movements and selective adhesion, J Exp Zool, 128, 53, 10.1002/jez.1401280105 Fletcher, 2013, Implementing vertex dynamics models of cell populations in biology within a consistent computational framework, Prog Biophys Mol Biol, 113, 299, 10.1016/j.pbiomolbio.2013.09.003 Graner, 1992, Simulation of biological cell sorting using a two-dimensional extended Potts model, Phys Rev Lett, 69, 2013, 10.1103/PhysRevLett.69.2013 Honda, 2004, A three-dimensional vertex dynamics cell model of space-filling polyhedra simulating cell behavior in a cell aggregate, J Theor Biol, 226, 439, 10.1016/j.jtbi.2003.10.001 Hannezo, 2014, Theory of epithelial sheet morphology in three dimensions, Proc Natl Acad Sci, 111, 27, 10.1073/pnas.1312076111 Misra, 2016, Shape transformations of epithelial shells, Biophys J, 110, 1670, 10.1016/j.bpj.2016.03.009 Bielmeier, 2016, Interface contractility between differently fated cells drives cell elimination and cyst formation, Curr Biol, 2, 563, 10.1016/j.cub.2015.12.063 Murisic, 2015, From discrete to continuum models of three-dimensional deformations in epithelial sheets, Biophys J, 109, 154, 10.1016/j.bpj.2015.05.019 He, 2014, Apical constriction drives tissue-scale hydrodynamic flow to mediate cell elongation, Nature, 508, 392, 10.1038/nature13070 Cochet-Escartin, 2014, Border forces and friction control epithelial closure dynamics, Biophys J, 106, 65, 10.1016/j.bpj.2013.11.015 Ranft, 2014, Mechanically driven interface propagation in biological tissues, New J Phys, 16 Recho, 2016, One-dimensional collective migration of a proliferating cell monolayer, Soft Matter, 12, 2381, 10.1039/C5SM02857D Montel, 2011, Stress clamp experiments on multicellular tumor spheroids, Phys Rev Lett, 107, 188102, 10.1103/PhysRevLett.107.188102 Banerjee, 2015, Propagating stress waves during epithelial expansion, Phys Rev Lett, 114, 228101, 10.1103/PhysRevLett.114.228101 Doostmohammadi, 2016, Stabilization of active matter by flow-vortex lattices and defect ordering, Nat Commun, 7, 10557, 10.1038/ncomms10557 Truskinovsky, 2014, A mechanical perspective on vertebral segmentation, Int J Eng Sci, 83, 124, 10.1016/j.ijengsci.2014.05.003 Savin, 2011, On the growth and form of the gut, Nature, 476, 57, 10.1038/nature10277 Shyer, 2013, Villification: how the gut gets its villi, Nature, 342, 6155 Hannezo, 2011, Instabilities of monolayered epithelia: shape and structure of villi and crypts, Phys Rev Lett, 107, 1, 10.1103/PhysRevLett.107.078104 Tallinen, 2016, On the growth and form of cortical convolutions, Nat Phys, 10.1038/nphys3632