Tetratricopeptide Repeats of Tfc4 and a Limiting Step in the Assembly of the Initiation Factor TFIIIB
Tài liệu tham khảo
Abe, 2000, Structural basis of presequence recognition by the mitochondrial protein import receptor Tom20, Cell, 100, 551, 10.1016/S0092-8674(00)80691-1
Andrau, 1999, Mutagenesis of yeast TFIIIB70 reveals C-terminal residues critical for interaction with TBP and C34, J. Mol. Biol., 288, 511, 10.1006/jmbi.1999.2724
Baker, 1986, Effects of tRNATyr point mutations on the binding of yeast RNA polymerase III transcription factor C, J. Biol. Chem., 261, 5275, 10.1016/S0021-9258(19)57210-6
Bartholomew, 1990, The subunit structure of Saccharomyces cerevisiae transcription factor IIIC probed with a novel photocrosslinking reagent, EMBO J., 9, 2197, 10.1002/j.1460-2075.1990.tb07389.x
Bartholomew, 1991, Two components of Saccharomyces cerevisiae transcription factor IIIB (TFIIIB) are stereospecifically located upstream of a tRNA gene and interact with the second-largest subunit of TFIIIC, Mol. Cell. Biol., 11, 5181, 10.1128/MCB.11.10.5181
Brown, 2000, RNA polymerase III transcription: its control by tumor suppressors and its deregulation by transforming agents, Gene Expr., 9, 15, 10.3727/000000001783992713
Buratowski, 1992, A suppressor of TBP mutations encodes an RNA polymerase III transcription factor with homology to TFIIB, Cell, 71, 221, 10.1016/0092-8674(92)90351-C
Cairns, 1998, p53 is a general repressor of RNA polymerase III transcription, EMBO J., 17, 3112, 10.1093/emboj/17.11.3112
Chaussivert, 1995, Complex interactions between yeast TFIIIB and TFIIIC, J. Biol. Chem., 270, 15353, 10.1074/jbc.270.25.15353
Chesnokov, 1996, p53 inhibits RNA polymerase III-directed transcription in a promoter dependent manner, Mol. Cell. Biol., 16, 7084, 10.1128/MCB.16.12.7084
Chu, 1997, RNA polymerase III transcription repressed by Rb through its interactions with TFIIIB and TFIIIC2, J. Biol. Chem., 272, 14755, 10.1074/jbc.272.23.14755
Cloutier, 2001, Kinetic trapping of DNA by transcription factor IIIB, Proc. Natl. Acad. Sci. USA, 98, 9581, 10.1073/pnas.161292298
Colbert, 1992, A yeast TFIIB related factor involved in RNA polymerase III transcription, Genes Dev., 6, 1940, 10.1101/gad.6.10.1940
Colbert, 1998, Architecture of protein and DNA contacts within the TFIIB-DNA complex, Mol. Cell. Biol., 18, 1682, 10.1128/MCB.18.3.1682
Conesa, 1993, On the subunit composition, stoichiometry, and phosphorylation of the yeast transcription factor TFIIIC⧸tau, J. Biol. Chem., 268, 18047, 10.1016/S0021-9258(17)46809-8
Das, 1998, The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR mediated protein-protein interactions, EMBO J., 17, 1192, 10.1093/emboj/17.5.1192
Deprez, 1999, A subunit of yeast TFIIIC participates in the recruitment of TATA-binding protein, Mol. Cell. Biol., 19, 8042, 10.1128/MCB.19.12.8042
Deshpande, 1996, DNA replication fork pause sites dependent on transcription, Science, 272, 1030, 10.1126/science.272.5264.1030
Dieci, 2000, TFIIIC independent in vitro transcription of yeast tRNA genes, J. Mol. Biol., 299, 601, 10.1006/jmbi.2000.3783
Dieci, 1996, Facilitated recycling pathway for RNA polymerase III, Cell, 84, 245, 10.1016/S0092-8674(00)80979-4
Donze, 2001, RNA polymerase III and RNA polymerase II promoter complexes are heterochromatin barriers in Saccharomyces cerevisiae, EMBO J., 20, 520, 10.1093/emboj/20.3.520
Dumay-Odelot, 2002, Multiple roles of the tau131 subunit of yeast transcription factor IIC (TFIIIC) in TFIIIB assembly, Mol. Cell. Biol., 22, 298, 10.1128/MCB.22.1.298-308.2002
Dumay, 1999, Interaction between yeast RNA polymerase III and transcription factor TFIIIC via ABC10alpha and tau131 subunits, J. Biol. Chem., 274, 33462, 10.1074/jbc.274.47.33462
Felton-Edkins, 2002, Multiple mechanisms contribute to the activation of RNA polymerase III transcription in cells transformed by papovaviruses, J. Biol. Chem., 277, 48182, 10.1074/jbc.M201333200
Ferri, 2000, A novel subunit of yeast RNA polymerase III interacts with the TFIIB related domain of TFIIIB70, Mol. Cell. Biol., 20, 488, 10.1128/MCB.20.2.488-495.2000
Flores, 1999, A protein-protein interaction map of yeast RNA polymerase III, Proc. Natl. Acad. Sci. USA, 96, 7815, 10.1073/pnas.96.14.7815
Gatto, 2000, Peroxisomal targeting signal-1 recognition by the TPR domains of human PEX5, Nat. Struct. Biol., 7, 1091, 10.1038/81930
Geiduschek, 2001, The RNA polymerase III transcription apparatus, J. Mol. Biol., 310, 1, 10.1006/jmbi.2001.4732
Geiduschek, 1988, Transcription by RNA polymerase III, Annu. Rev. Biochem., 57, 873, 10.1146/annurev.bi.57.070188.004301
Ghavidel, 1997, Casein kinase II regulation of yeast TFIIIB is mediated by the TATA-binding protein, Genes Dev., 11, 2780, 10.1101/gad.11.21.2780
Gomez-Roman, 2003, Direct activation of RNA polymerase III transcription by c-Myc, Nature, 421, 290, 10.1038/nature01327
Gottesfeld, 1994, Mitotic repression of RNA polymerase III transcription in vitro mediated by phosphorylation of a TFIIIB component, Science, 263, 81, 10.1126/science.8272869
Hahn, 2000, The zinc ribbon domains of the general transcription factors TFIIB and Brf: conserved functional surfaces but different roles in transcription initiation, Genes Dev., 14, 719
Hamada, 2001, Widespread use of TATA elements in the core promoters for RNA polymerases III, II, and I in fission yeast, Mol. Cell. Biol., 21, 6870, 10.1128/MCB.21.20.6870-6881.2001
Hsieh, 1999, The TFIIIC90 subunit of TFIIIC interacts with multiple components of the RNA polymerase III machinery and contains a histone-specific acetyltransferase activity, Mol. Cell. Biol., 19, 7697, 10.1128/MCB.19.11.7697
Hsieh, 1999, Cloning and characterization of two evolutionarily conserved subunits (TFIIIC102 and TFIIIC63) of human TFIIIC and their involvement in functional interactions with TFIIIB and RNA polymerase III, Mol. Cell. Biol., 19, 4944, 10.1128/MCB.19.7.4944
Huang, 2000, Isolation and cloning of four subunits of a fission yeast TFIIIC complex that includes an ortholog of the human regulatory protein TFIIICbeta, J. Biol. Chem., 275, 31480, 10.1074/jbc.M004635200
Huang, 2001, Comparison of the RNA polymerase III transcription machinery in Schizosaccharomyces pombe, Saccharomyces cerevisiae and human, Nucleic Acids Res., 29, 2675, 10.1093/nar/29.13.2675
Huet, 1997, A cryptie DNA binding domain at the COOH terminus of TFIIIB70 affects formation, stability, and function of preinitiation complexes, J. Biol. Chem., 272, 18341, 10.1074/jbc.272.29.18341
Huibregtse, 1989, Genomic footprinting of a yeast tRNA gene reveals stable complexes over the 5′-flanking region, Mol. Cell. Biol., 9, 3244, 10.1128/MCB.9.8.3244
Ishiguro, 2002, Essential roles of Bdp1, a subunit of RNA polymerase III initiation factor TFIIIB, in transcription and tRNA processing, Mol. Cell. Biol., 22, 3264, 10.1128/MCB.22.10.3264-3275.2002
Johnston, 2002, CK2 forms a stable complex with TFIIIB and activates RNA polymerase III transcription in human cells, Mol. Cell. Biol., 22, 3757, 10.1128/MCB.22.11.3757-3768.2002
Kassavetis, 1994, 107
Kassavetis, 1997, Domains of the Brf component of RNA polymerase III transcription factor IIIB (TFIIIB): functions in assembly of TFIIIB-DNA complexes and recruitment of RNA polymerase to the promoter, Mol. Cell. Biol., 17, 5299, 10.1128/MCB.17.9.5299
Kassavetis, 1990, S. cerevisiae TFIIIB is the transcription initiation factor proper of RNA polymerase III, while TFIIIA and TFIIIC are assembly factors, Cell, 60, 235, 10.1016/0092-8674(90)90739-2
Kassavetis, 1992, The role of the TATA-binding protein in the assembly and function of the multisubunit yeast RNA polymerase III transcription factor, TFIIIB, Cell, 71, 1055, 10.1016/0092-8674(92)90399-W
Kassavetis, 1998, A post-recruitment function for the RNA polymerase III transcription-initiation factor IIIB, Proc. Natl. Acad. Sci. USA, 95, 9196, 10.1073/pnas.95.16.9196
Kassavetis, 1998, Functional and structural organization of Brf, the TFIIB-related component of the RNA polymerase III transcription initiation complex, Mol. Cell. Biol., 18, 5587, 10.1128/MCB.18.9.5587
Kassavetis, 2001, The RNA polymerase III transcription initiation factor TFIIIB participates in two steps of promoter opening, EMBO J., 20, 2823, 10.1093/emboj/20.11.2823
Khoo, 1994, Conserved functional domains of the RNA polymerase III general transcription factor BRF, Genes Dev., 8, 2879, 10.1101/gad.8.23.2879
Kruppa, 2001, Nhp6, an HMG1 protein, functions in SNR6 transcription by RNA polymerase III in S. cerevisiae, Mol. Cell, 7, 309, 10.1016/S1097-2765(01)00179-4
Kumar, 1997, Functional dissection of the B′′ component of RNA polymerase III transcription factor IIIB: a scaffolding protein with multiple roles in assembly and initiation of transcription, Mol. Cell. Biol., 17, 1868, 10.1128/MCB.17.4.1868
Kumar, 2001, An unexpected extended conformation for the third TPR motif of the peroxin PEX5 from Trypanosoma brucer, J. Mol. Biol., 307, 271, 10.1006/jmbi.2000.4465
Lamb, 1995, Tetratrico peptide repeat interactions: to TPR or not to TPR?, Trends Biochem. Sci., 20, 257, 10.1016/S0968-0004(00)89037-4
Lapouge, 2000, Structure of the TPR domain of p67phox in complex with Rac.GTP, Mol. Cell, 6, 899, 10.1016/S1097-2765(05)00091-2
Larminie, 1997, Mechanistic analysis of RNA polymerase III regulation by the retinoblastoma protein, EMBO J., 16, 2061, 10.1093/emboj/16.8.2061
Lefebvre, 1992, TFC3: gene encoding the B-block binding subunit of the yeast transcription factor IIIC, Proc. Natl. Acad. Sci. USA, 89, 10512, 10.1073/pnas.89.21.10512
Lefebvre, 1994, A mutation in the largest subunit of yeast TFIIIC affects tRNA and 5 S RNA synthesis. Identification of two classes of suppressors, J. Biol. Chem., 269, 23374, 10.1016/S0021-9258(17)31663-0
Li, 2000, Repression of ribosome and tRNA synthesis in secretion-defective cells is signaled by a novel branch of the cell integrity pathway, Mol. Cell. Biol., 20, 3843, 10.1128/MCB.20.11.3843-3851.2000
Liao, Y. Willis, I. M., and Moir, R. D. (2003). Two TFIIIB factors, Brf1 and Bdp1, bind to the TFIIIC subunit, Tfc4, in the TPR Arrays. J. Biol. Chem.278, 44467–44474
Lopez-de-Leon, 1992, PCF4 encodes an RNA polymerase III transcription factor with homology to TFIIB, Cell, 71, 211, 10.1016/0092-8674(92)90350-L
Lopez, 2001, High-mobility-group proteins NHP6A and NHP6B participate in activation of the RNA polymerase III SNR6 gene, Mol. Cell. Biol., 21, 3096, 10.1128/MCB.21.9.3096-3104.2001
Marck, 1993, The TFIIIB assembling subunit of yeast transcription factor TFIIIC has both tetratricopoptide repeats and basic helix loop-helix motifs, Proc. Natl. Acad. Sci. USA, 90, 4027, 10.1073/pnas.90.9.4027
Margottin, 1991, Participation of the TATA factor in transcription of the yeast U6 gene by RNA polymerase C, Science, 251, 424, 10.1126/science.1989075
McManus, 2002, Gene silencing in mammals by small interfering RNAs, Nat. Rev. Genet., 3, 737, 10.1038/nrg908
Mital, 1996, RNA polymerase III transcription from the human U6 and adenovirus type 2 VAI promoters has different requirements for human BRF, a subunit of human TFIIIB, Mol. Cell. Biol., 16, 7031, 10.1128/MCB.16.12.7031
Moir, R. D., Puglia, K., Liao, Y., and Willis, I. M. (2004). A mutation in the TPR channel of Tfc4 directly increases Brf1 binding. Manuscript in preparation
Moir, 2000, Interactions between the tetratricopeptide repeat-containing transcription factor TFIIIC131 and its ligand, TFIIIB70. Evidence for a conformational change in the complex, J. Biol. Chem., 275, 26591, 10.1074/jbc.M003991200
Moir, 2002, A gain-of-function mutation in the second tetratricopeptide repeat of TFIIIC131 relieves autoinhibition of Brfl binding, Mol. Cell. Biol., 22, 6131, 10.1128/MCB.22.17.6131-6141.2002
Moir, 2002, Autoinhibition of TFIIIB70 binding by the tetratricopeptide repeat containing subunit of TFIIIC, J. Biol. Chem., 277, 694, 10.1074/jbc.M108924200
Moir, 1997, A tetratricopeptide repeat mutation in yeast transcription factor IIIC131 (TFIIIC131) facilitates recruitment of TFIIB-related factor TFIIIB70, Mol. Cell. Biol., 17, 7119, 10.1128/MCB.17.12.7119
Paule, 2000, Survey and summary: transcription by RNA polymerases I and III, Nucleic Acids Res., 28, 1283, 10.1093/nar/28.6.1283
Rameau, 1994, A mutation in the second largest subunit of TFIIIC increases a rate limiting step in transcription by RNA polymerase III, Mol. Cell. Biol., 14, 822, 10.1128/MCB.14.1.822
Rice, 1999, Crystal structure of the vesicular transport protein Sec17: implications for SNAP function in SNARE complex disassembly, Mol. Cell, 4, 85, 10.1016/S1097-2765(00)80190-2
Rozenfeld, 2001, Genetic interactions within TFIIIC, the promoter-binding factor of yeast RNA polymerase III, Mol. Genet. Genomics, 705, 10.1007/s004380100467
Ruth, 1996, A suppressor of mutations in the class III transcription system encodes a component of yeast TFIIIB, EMBO J., 15, 1941, 10.1002/j.1460-2075.1996.tb00545.x
Scheufler, 2000, Structure of TPR domain-peptide complexes: critical elements in the assembly of the Hsp70-Hsp90 multichaperone machine, Cell, 101, 199, 10.1016/S0092-8674(00)80830-2
Schramm, 2002, Recruitment of RNA polymerase III to its target promoters, Genes Dev., 16, 2593, 10.1101/gad.1018902
Schultz, 1989, The two DNA binding domains of yeast transcription factor tau as observed by scanning transmission electron microscopy, EMBO J., 8, 3815, 10.1002/j.1460-2075.1989.tb08559.x
Scott, 2001, Regulation of RNA polymerase III transcription during cell cycle entry, J. Biol. Chem., 276, 1005, 10.1074/jbc.M005417200
Sethy-Coraci, 1998, A differential response of wild type and mutant promoters to TFIIIB70 overexpression in vivo and in vitro, Nucleic Acids Res., 26, 2344, 10.1093/nar/26.10.2344
Shen, 1996, DNA binding domain and subunit interactions of transcription factor IIIC revealed by dissection with poliovirus 3C protease, Mol. Cell. Biol., 16, 4163, 10.1128/MCB.16.8.4163
Sinn, 1995, Cloning and characterization of a TFIIIC2 subunit (TFIIIC beta) whose presence correlates with activation of RNA polymerase III-mediated transcription by adenovirus E1A expression and serum factors, Genes Dev., 9, 675, 10.1101/gad.9.6.675
Sutcliffe, 1999, RNA polymerase III transcription factor IIIB is a target for repression by pocket proteins p107 and p130, Mol. Cell. Biol., 19, 4255, 10.1128/MCB.19.6.4255
Taylor, 2001, Two structures of cyclophilin 40. folding and fidelity in the tpr domains, Structure (Camb.), 9, 431, 10.1016/S0969-2126(01)00603-7
Upadhya, 2002, Maf1 Is an essential mediator of diverse signals that repress RNA polymerase III transcription, Mol. Cell, 10, 1489, 10.1016/S1097-2765(02)00787-6
Wang, 1995, Structure and function of a human transcription factor TFIIIB subunit that is evolutionarily conserved and contains both TFIIB- and high-mobility-group protein 2-related domains, Proc. Natl. Acad. Sci. USA, 92, 7026, 10.1073/pnas.92.15.7026
Warner, 1999, The economics of ribosome biosynthesis in yeast, Trends Biochem. Sci., 24, 437, 10.1016/S0968-0004(99)01460-7
White, 1998
White, 1998, Transcription factor IIIB: An important determinant of biosynthetic capacity that is targeted by tumour suppressors and transforming proteins, Int. J. Oncol., 12, 741
White, 1995, Cell cycle regulation of RNA polymerase III transcription, Mol. Cell. Biol., 15, 6653, 10.1128/MCB.15.12.6653
Willis, 1989, A selection for mutants of the RNA polymerase III transcription apparatus. PCF1 stimulates transcription of tRNA and 5S RNA genes, EMBO J., 8, 4281, 10.1002/j.1460-2075.1989.tb08614.x
Yaffe, 2002, How do 14-3-3 proteins work? Gatekeeper phosphorylation and the molecular anvil hypothesis, . FEBS Lett., 513, 53, 10.1016/S0014-5793(01)03288-4