THE ALBUMIN-BINDING DOMAIN AS A SCAFFOLD FOR PROTEIN ENGINEERING
Tài liệu tham khảo
Navarre, 1999, Surface proteins of gram-positive bacteria and mechanisms of their targeting to the cell wall envelope, Microbiol Mol Biol Rev, 63, 174, 10.1128/MMBR.63.1.174-229.1999
Kronvall, 1979, Specific absorption of human serum albumin, immunoglobulin A, and immunoglobulin G with selected strains of group A and G streptococci, Infect Immun, 25, 1, 10.1128/IAI.25.1.1-10.1979
Myhre, 1984, Surface receptors for human serum albumin in Peptococcus magnus strains, J Med Microbiol, 18, 189, 10.1099/00222615-18-2-189
Johansson, 2002, Structure, specificity, and mode of interaction for bacterial albumin-binding modules, J Biol Chem, 277, 8114, 10.1074/jbc.M109943200
de Chateau, 1996, Identification of interdomain sequences promoting the intronless evolution of a bacterial protein family, Proc Natl Acad Sci U S A, 93, 8490, 10.1073/pnas.93.16.8490
de Chateau, 1996, Protein PAB, an albumin-binding bacterial surface protein promoting growth and virulence, J Biol Chem, 271, 26609, 10.1074/jbc.271.43.26609
Clarke, 2002, Analysis of Ebh, a 1.1-megadalton cell wall-associated fibronectin-binding protein of Staphylococcus aureus, Infect Immun, 70, 6680, 10.1128/IAI.70.12.6680-6687.2002
Tanaka, 2008, A helical string of alternately connected three-helix bundles for the cell wall-associated adhesion protein Ebh from Staphylococcus aureus, Structure, 16, 488, 10.1016/j.str.2007.12.018
Christner, 2010, The giant extracellular matrix-binding protein of Staphylococcus epidermidis mediates biofilm accumulation and attachment to fibronectin, Mol Microbiol, 75, 187, 10.1111/j.1365-2958.2009.06981.x
Egesten, 2011, Binding of albumin promotes bacterial survival at the epithelial surface, J Biol Chem, 286, 2469, 10.1074/jbc.M110.148171
Bjorck, 1984, Purification and some properties of streptococcal protein G, a novel IgG-binding reagent, J Immunol, 133, 969, 10.4049/jimmunol.133.2.969
Bjorck, 1987, Streptococcal protein G, expressed by streptococci or by Escherichia coli, has separate binding sites for human albumin and IgG, Mol Immunol, 24, 1113, 10.1016/0161-5890(87)90080-0
Reis, 1984, Streptococcal Fc receptors. I. Isolation and partial characterization of the receptor from a group C streptococcus, J Immunol, 132, 3091, 10.4049/jimmunol.132.6.3091
Akerstrom, 1987, Definition of IgG- and albumin-binding regions of streptococcal protein G, J Biol Chem, 262, 13388, 10.1016/S0021-9258(19)76438-2
Gronenborn, 1991, A novel, highly stable fold of the immunoglobulin binding domain of streptococcal protein G, Science, 253, 657, 10.1126/science.1871600
Kraulis, 1996, The serum albumin-binding domain of streptococcal protein G is a three-helical bundle: a heteronuclear NMR study, FEBS Lett, 378, 190, 10.1016/0014-5793(95)01452-7
Uhlen, 1984, Complete sequence of the staphylococcal gene encoding protein A. A gene evolved through multiple duplications, J Biol Chem, 259, 1695, 10.1016/S0021-9258(17)43463-6
Gouda, 1992, Three-dimensional solution structure of the B domain of staphylococcal protein A: comparisons of the solution and crystal structures, Biochemistry, 31, 9665, 10.1021/bi00155a020
Johansson, 1995, The GA module, a mobile albumin-binding bacterial domain, adopts a three-helix-bundle structure, FEBS Lett, 374, 257, 10.1016/0014-5793(95)01121-T
Grodzki, 2010, Antibody purification: affinity chromatography – protein A and protein G Sepharose, Methods Mol Biol, 588, 33, 10.1007/978-1-59745-324-0_5
Boström, 2012, Purification Systems Based on Bacterial Surface Proteins
Ståhl, 1997, The use of gene fusions to protein A and protein G in immunology and biotechnology, Pathol Biol (Paris), 45, 66
Konig, 1998, Use of an albumin-binding domain for the selective immobilisation of recombinant capture antibody fragments on ELISA plates, J Immunol Methods, 218, 73, 10.1016/S0022-1759(98)00112-4
Nygren, 1988, Analysis and use of the serum albumin binding domains of streptococcal protein G, J Mol Recognit, 1, 69, 10.1002/jmr.300010204
de Chateau, 1994, Protein PAB, a mosaic albumin-binding bacterial protein representing the first contemporary example of module shuffling, J Biol Chem, 269, 12147, 10.1016/S0021-9258(17)32693-5
Johansson, 1997, Solution structure of the albumin-binding GA module: a versatile bacterial protein domain, J Mol Biol, 266, 859, 10.1006/jmbi.1996.0856
Cramer, 2007, Crystal structure of a bacterial albumin-binding domain at 1.4 A resolution, FEBS Lett, 581, 3178, 10.1016/j.febslet.2007.06.003
Lejon, 2004, Crystal structure and biological implications of a bacterial albumin binding module in complex with human serum albumin, J Biol Chem, 279, 42924, 10.1074/jbc.M406957200
Lejon, 2008, Structural basis for the binding of naproxen to human serum albumin in the presence of fatty acids and the GA module, Acta Crystallogr Sect F Struct Biol Cryst Commun, 64, 64, 10.1107/S174430910706770X
Linhult, 2002, Mutational analysis of the interaction between albumin-binding domain from streptococcal protein G and human serum albumin, Protein Sci, 11, 206, 10.1110/ps.02802
Gulich, 2000, Stability towards alkaline conditions can be engineered into a protein ligand, J Biotechnol, 80, 169, 10.1016/S0168-1656(00)00259-5
Rozak, 2005, G148-GA3: a streptococcal virulence module with atypical thermodynamics of folding optimally binds human serum albumin at physiological temperatures, Biochim Biophys Acta, 1753, 226, 10.1016/j.bbapap.2005.10.005
Nilsson, 1987, A synthetic IgG-binding domain based on staphylococcal protein A, Protein Eng, 1, 107, 10.1093/protein/1.2.107
Rozak, 2006, Using offset recombinant polymerase chain reaction to identify functional determinants in a common family of bacterial albumin binding domains, Biochemistry, 45, 3263, 10.1021/bi051926s
He, 2006, Structure, dynamics, and stability variation in bacterial albumin binding modules: implications for species specificity, Biochemistry, 45, 10102, 10.1021/bi060409m
He, 2007, An artificially evolved albumin binding module facilitates chemical shift epitope mapping of GA domain interactions with phylogenetically diverse albumins, Protein Sci, 16, 1490, 10.1110/ps.072799507
Kontermann, 2011, Strategies for extended serum half-life of protein therapeutics, Curr Opin Biotechnol, 22, 868, 10.1016/j.copbio.2011.06.012
Sleep, 2013, Albumin as a versatile platform for drug half-life extension, Biochimica et Biophysica Acta, 10.1016/j.bbagen.2013.04.023
Frejd, 2012, Half-Life Extension by Binding to Albumin through an Albumin Binding Domain
Nygren, 1991, 363
Andersen, 2012, Structure-based mutagenesis reveals the albumin-binding site of the neonatal Fc receptor, Nat Commun, 3, 610, 10.1038/ncomms1607
Andersen, 2011, Extending half-life by indirect targeting of the neonatal Fc receptor (FcRn) using a minimal albumin binding domain, J Biol Chem, 286, 5234, 10.1074/jbc.M110.164848
Stork, 2009, Biodistribution of a bispecific single-chain diabody and its half-life extended derivatives, J Biol Chem, 284, 25612, 10.1074/jbc.M109.027078
Jonsson, 2008, Engineering of a femtomolar affinity binding protein to human serum albumin, Protein Eng Des Sel, 21, 515, 10.1093/protein/gzn028
Orlova, 2013, Site-Specific Radiometal Labeling and Improved Biodistribution Using ABY-027, A Novel HER2-Targeting Affibody Molecule–Albumin-Binding Domain Fusion Protein, Journal of Nuclear Medicine, 10.2967/jnumed.112.110700
Hopp, 2010, The effects of affinity and valency of an albumin-binding domain (ABD) on the half-life of a single-chain diabody-ABD fusion protein, Protein Eng Des Sel, 23, 827, 10.1093/protein/gzq058
Nguyen, 2006, The pharmacokinetics of an albumin-binding Fab (AB.Fab) can be modulated as a function of affinity for albumin, Protein Eng Des Sel, 19, 291, 10.1093/protein/gzl011
Linhult, 2003, Evaluation of different linker regions for multimerization and coupling chemistry for immobilization of a proteinaceous affinity ligand, Protein Eng, 16, 1147, 10.1093/protein/gzg121
Lofblom, 2010, Affibody molecules: engineered proteins for therapeutic, diagnostic and biotechnological applications, FEBS Lett, 584, 2670, 10.1016/j.febslet.2010.04.014
Cyranka-Czaja, 2012, A novel, stable, helical scaffold as an alternative binder — construction of phage display libraries, Acta Biochimica Polonica, 59, 383, 10.18388/abp.2012_2126
Ahmad, 2012, Novel high-affinity binders of human interferon gamma derived from albumin-binding domain of protein G, Proteins, 80, 774, 10.1002/prot.23234
Alm, 2010, A small bispecific protein selected for orthogonal affinity purification, Biotechnol J, 5, 605, 10.1002/biot.201000041
Nilvebrant, 2012, Orthogonal protein purification facilitated by a small bispecific affinity tag, J Vis Exp, 10.3791/3370
Nilvebrant, 2011, Engineering bispecificity into a single albumin-binding domain, PLoS One, 6, e25791, 10.1371/journal.pone.0025791
Nilvebrant, 2013, Development and characterization of small bispecific albumin-binding domains with high affinity for ErbB3, Cell Mol Life Sci, 10.1007/s00018-013-1370-9
Bryan, 2010, Proteins that switch folds, Curr Opin Struct Biol, 20, 482, 10.1016/j.sbi.2010.06.002
Lei, 2007, Ab initio folding of albumin binding domain from all-atom molecular dynamics simulation, J Phys Chem B, 111, 5458, 10.1021/jp0704867
Alexander, 2005, Directed evolution of highly homologous proteins with different folds by phage display: implications for the protein folding code, Biochemistry, 44, 14045, 10.1021/bi051231r
He, 2005, Solution NMR structures of IgG binding domains with artificially evolved high levels of sequence identity but different folds, Biochemistry, 44, 14055, 10.1021/bi051232j
Alexander, 2007, The design and characterization of two proteins with 88% sequence identity but different structure and function, Proc Natl Acad Sci U S A, 104, 11963, 10.1073/pnas.0700922104
He, 2008, NMR structures of two designed proteins with high sequence identity but different fold and function, Proc Natl Acad Sci U S A, 105, 14412, 10.1073/pnas.0805857105
Alexander, 2009, A minimal sequence code for switching protein structure and function, Proc Natl Acad Sci U S A, 106, 21149, 10.1073/pnas.0906408106
He, 2012, Mutational tipping points for switching protein folds and functions, Structure, 20, 283, 10.1016/j.str.2011.11.018
Bryan, 2013, Implications of protein fold switching, Curr Opin Struct Biol, 10.1016/j.sbi.2013.03.001
Shen, 2010, De novo structure generation using chemical shifts for proteins with high-sequence identity but different folds, Protein Sci, 19, 349, 10.1002/pro.303