Symbiotic fungi as biotechnological tools: Methodological challenges and relative benefits in agriculture and forestry

Fungal Biology Reviews - Tập 42 - Trang 34-55 - 2022
Niloufar Hagh-Doust1,2, Sanni M.A. Färkkilä1, Mahdieh S. Hosseyni Moghaddam1, Leho Tedersoo1,2
1Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia
2Mycology and Microbiology Center, University of Tartu, Tartu, Estonia

Tài liệu tham khảo

Abbaspour, 2010, Investigation of the effects of Vesicular Arbuscular Mycorrhiza on mineral nutrition and growth of Carthamus tinctorius under salt stress conditions, Russ. J. Plant. Physiol., 57, 526, 10.1134/S1021443710040102 Aghababaei, 2014, The significant contribution of mycorrhizal fungi and earthworms to maize protection and phytoremediation in Cd-polluted soils, Pedobiologia, 57, 223, 10.1016/j.pedobi.2014.09.004 Agnolucci, 2020, Health-promoting properties of plant products: the role of mycorrhizal fungi and associated bacteria, Agronomy-Basel, 10, 1864, 10.3390/agronomy10121864 Ana, 2016, Availability and morphological characteristics of endophytic fungi held in different methods of preservation, Sci. Res. Essays, 11, 76, 10.5897/SRE2013.5696 Arnold, 2007, Understanding the diversity of foliar endophytic fungi: progress, challenges, and frontiers, Fungal biology reviews, 21, 51, 10.1016/j.fbr.2007.05.003 Arnold, 2003, Canopy cover and leaf age affect colonization by tropical fungal endophytes: ecological pattern and process in Theobroma cacao (Malvaceae), Mycologia, 95, 388, 10.1080/15572536.2004.11833083 Arteaga-Leon, 2018, Ectomycorrhizal inoculation with edible fungi increases plant growth and nutrient contents of Pinus ayacahuite, Rev. Mex. Biodivers., 89, 1089 Atmosukarto, 2005, Isolation and characterization of Muscodor albus I-41.3 s, a volatile antibiotic producing fungus, Plant Sci., 169, 854, 10.1016/j.plantsci.2005.06.002 Awasthi, 2019, Field-Specific Microbial Consortia Are Feasible: a Response to Kaminsky et al, Trends Biotechnol., 37, 569, 10.1016/j.tibtech.2019.03.002 Bacon, 2000, 251 Badri, 2009, Regulation and function of root exudates, Plant Cell Environ., 32, 666, 10.1111/j.1365-3040.2009.01926.x Baker, 2006, Use of commercially available cryogenic vials for long-term preservation of dermatophyte fungi, J. Clin. Microbiol., 44, 617, 10.1128/JCM.44.2.617-618.2006 Bamisile, 2018, Prospects of endophytic fungal entomopathogens as biocontrol and plant growth promoting agents: an insight on how artificial inoculation methods affect endophytic colonization of host plants, Microbiol. Res., 217, 34, 10.1016/j.micres.2018.08.016 Beltayef, 2020, Potential Piriformospora indica effect on growth and mineral nutrition of Phaseolus vulgaris crop under low phosphorus intake, J. Plant Nutr., 44, 498, 10.1080/01904167.2020.1845366 Berruti, 2016, Arbuscular mycorrhizal fungi as natural biofertilizers: let's benefit from past successes, Front. Microbiol., 6, 1559, 10.3389/fmicb.2015.01559 Berthelot, 2016, Plant growth promotion, metabolite production and metal tolerance of dark septate endophytes isolated from metal-polluted poplar phytomanagement sites, FEMS Microbiol. Ecol., 92, 10.1093/femsec/fiw144 Bilal, 2020, Synergistic association of endophytic fungi enhances Glycine max L. resilience to combined abiotic stresses: heavy metals, high temperature and drought stress, Ind. Crop. Prod., 143, 111931, 10.1016/j.indcrop.2019.111931 Bing, 1991, Suppression of ostrinia nubilalis (hübner)(Lepidoptera: Pyralidae) by endophytic beauveria bassiana (balsamo) vuillemin, Environ. Entomol., 20, 1207, 10.1093/ee/20.4.1207 Borman, 2006, Evaluation of the viability of pathogenic filamentous fungi after prolonged storage in sterile water and review of recent published studies on storage methods, Mycopathologia, 161, 361, 10.1007/s11046-006-0023-z Bourgaud, 2001, Production of plant secondary metabolites: a historical perspective, Plant Sci., 161, 839, 10.1016/S0168-9452(01)00490-3 Brundrett, 1991, Mycorrhizas in natural ecosystems, Adv. Ecol. Res., 21, 171, 10.1016/S0065-2504(08)60099-9 Brundrett, 2004, Diversity and classification of mycorrhizal associations, Biol. Rev., 79, 473, 10.1017/S1464793103006316 Brundrett, 2002, Coevolution of roots and mycorrhizas of land plants, New Phytol., 154, 275, 10.1046/j.1469-8137.2002.00397.x Brundrett, 2006, 281 Brundrett, 2009, Mycorrhizal associations and other means of nutrition of vascular plants: understanding the global diversity of host plants by resolving conflicting information and developing reliable means of diagnosis, Plant Soil, 320, 37, 10.1007/s11104-008-9877-9 Brundrett, 2018, Evolutionary history of mycorrhizal symbioses and global host plant diversity, New Phytol., 220, 1108, 10.1111/nph.14976 Buck, 1997, 141 Burdsall, 1994, Preserving cultures of wood-decaying Basidiomycotina using sterile distilled water in cryovials, Mycologia, 86, 275, 10.1080/00275514.1994.12026408 Bush, 1997, Bioprotective alkaloids of grass-fungal endophyte symbioses, Plant Physiol., 114, 1, 10.1104/pp.114.1.1 Canton, 2016, Biochemical and ecophysiological responses to manganese stress by ectomycorrhizal fungus Pisolithus tinctorius and in association with Eucalyptus grandis, Mycorrhiza, 26, 475, 10.1007/s00572-016-0686-3 Cavagnaro, 2006, Arbuscular mycorrhizas, microbial communities, nutrient availability, and soil aggregates in organic tomato production, Plant Soil, 282, 209, 10.1007/s11104-005-5847-7 Chaves, 2004, Mechanisms underlying plant resilience to water deficits: prospects for water-saving agriculture, J. Exp. Bot., 55, 2365, 10.1093/jxb/erh269 Chen, 2019, Differential soil fungus accumulation and density dependence of trees in a subtropical forest, Science, 366, 124, 10.1126/science.aau1361 Chen, 2013, Arbuscular mycorrhizal fungi (AMF) increase growth and secondary metabolism in cucumber subjected to low temperature stress, Sci. Hortic., 160, 222, 10.1016/j.scienta.2013.05.039 Chen, 2007, Plant nitrogen acquisition and interactions under elevated carbon dioxide: impact of endophytes and mycorrhizae, Global Change Biol., 13, 1238, 10.1111/j.1365-2486.2007.01347.x Christophe, 2009, Laccaria bicolor S238N improves Scots pine mineral nutrition by increasing root nutrient uptake from soil minerals but does not increase mineral weathering, Plant Soil, 328, 145, 10.1007/s11104-009-0092-0 Clay, 2002, Evolutionary origins and ecological consequences of endophyte symbiosis with grasses, Am. Nat., 160, S99, 10.1086/342161 Cohen, 1999, Technique for large scale isolation of Discula umbrinella and other foliar endophytic fungi from Quercus species, Mycologia, 91, 917, 10.1080/00275514.1999.12061099 Collado, 2007, High-throughput culturing of fungi from plant litter by a dilution-to-extinction technique, FEMS Microbiol. Ecol., 60, 521, 10.1111/j.1574-6941.2007.00294.x Connon, 2002, High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates, Appl. Environ. Microbiol., 68, 3878, 10.1128/AEM.68.8.3878-3885.2002 Cosgrove, 2002, The growing world of expansins, Plant Cell Physiol., 43, 1436, 10.1093/pcp/pcf180 Cosme, 2018, Non-mycorrhizal plants: the exceptions that prove the rule, Trends Plant Sci., 23, 577, 10.1016/j.tplants.2018.04.004 Costa, 2019, Alginate gel entrapped ectomycorrhizal inoculum promoted growth of cuttings of Eucalyptus clones under nursery conditions, Can. J. For. Res., 48, 978, 10.1139/cjfr-2018-0129 Crahay, 2013, Viability of ectomycorrhizal fungi following cryopreservation, Fungal Biol-Uk, 117, 103, 10.1016/j.funbio.2012.12.003 Currah, 1987, New records and new taxa of fungi from the mycorrhizae of terrestrial orchids of alberta, Canadian Journal of Botany-Revue Canadienne De Botanique, 65, 2473 Davis, 2008, Biogeographic and phylogenetic patterns in diversity of liverwort-associated endophytes, Am. J. Bot., 95, 914, 10.3732/ajb.2006463 De Abreu, 2010, Fungal endophytes associated with the mistletoe Phoradendron perrottettii and its host tree Tapirira guianensis, Mycol. Prog., 9, 559, 10.1007/s11557-010-0663-8 de Souza Leite, 2013, Novel and highly diverse fungal endophytes in soybean revealed by the consortium of two different techniques, J. Microbiol., 51, 56, 10.1007/s12275-013-2356-x Dearnaley, 2017, Nitrogen transport in the orchid mycorrhizal symbiosis - further evidence for a mutualistic association, New Phytol., 213, 10, 10.1111/nph.14357 Declerck, 2005, 4 Douds, 1990, Cryopreservation of spores of vesicular–arbuscular mycorrhizal fungi, New Phytol., 115, 10.1111/j.1469-8137.1990.tb00498.x Dovana, 2015, In vitro morphogenesis of arabidopsis to search for novel endophytic fungi modulating plant growth, PLoS One, 10, e0143353, 10.1371/journal.pone.0143353 Dugan, 2002, The Neotyphodium endophyte of wild barley (Hordeum brevisubulatum subsp violaceum) grows and sporulates on leaf surfaces of the host, Symbiosis, 32, 147 Egamberdieva, 2017, Phytohormones and beneficial microbes: essential components for plants to balance stress and fitness, Front. Microbiol., 8, 2104, 10.3389/fmicb.2017.02104 Escudero, 2012, Effects on plant growth and root-knot nematode infection of an endophytic GFP transformant of the nematophagous fungus Pochonia chlamydosporia, Symbiosis, 57, 33, 10.1007/s13199-012-0173-3 Facelli, 2010, Underground friends or enemies: model plants help to unravel direct and indirect effects of arbuscular mycorrhizal fungi on plant competition, New Phytol., 185, 1050, 10.1111/j.1469-8137.2009.03162.x Farrar, 2014, Understanding and engineering beneficial plant–microbe interactions: plant growth promotion in energy crops, Plant Biotechnol. J., 12, 1193, 10.1111/pbi.12279 Fernandes, 2015, Diversity of endophytic fungi in Glycine max, Microbiol. Res., 181, 84, 10.1016/j.micres.2015.05.010 Fochi, 2017, Fungal and plant gene expression in the Tulasnella calospora-Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas, New Phytol., 213, 365, 10.1111/nph.14279 Franklin, 2014, Forests trapped in nitrogen limitation - an ecological market perspective on ectomycorrhizal symbiosis, New Phytol., 203, 657, 10.1111/nph.12840 Fransson, 2013, Host plant-ectomycorrhizal fungus combination drives resource allocation in willow: evidence for complex species interaction from a simple experiment, Ecoscience, 20, 112, 10.2980/20-2-3576 Frey-Klett, 2007, The mycorrhiza helper bacteria revisited, New Phytol., 176, 22, 10.1111/j.1469-8137.2007.02191.x Frey, 2019, Mycorrhizal fungi as mediators of soil organic matter dynamics, Annu. Rev. Ecol. Evol. Syst., 50, 237, 10.1146/annurev-ecolsys-110617-062331 Fu, 2015, Indole-3-acetic acid: a widespread physiological code in interactions of fungi with other organisms, Plant Signal. Behav., 10, e1048052, 10.1080/15592324.2015.1048052 Gallery, 2007, Diversity, host affinity, and distribution of seed-infecting fungi: a case study with Cecropia, Ecology, 88, 582, 10.1890/05-1207 Gallo, 2008, Natural products from endophytic fungi, 139 Gange, 2005, Dual colonization of Eucalyptus urophylla ST Blake by arbuscular and ectomycorrhizal fungi affects levels of insect herbivore attack, Agric. For. Entomol., 7, 253, 10.1111/j.1461-9555.2005.00268.x Gao, 2010, Mechanisms of fungal endophytes in plant protection against pathogens, Afr. J. Microbiol. Res., 4, 1346 Garbaye, 2000, The role of ectomycorrhizal symbiosis in the resistance of forests to water stress, Outlook Agric., 29, 63, 10.5367/000000000101293068 Gazis, 2012, Culture-based study of endophytes associated with rubber trees in Peru reveals a new class of Pezizomycotina: Xylonomycetes, Mol. Phylogenet. Evol., 65, 294, 10.1016/j.ympev.2012.06.019 Genre, 2020, Unique and common traits in mycorrhizal symbioses, Nat. Rev. Microbiol., 18, 649, 10.1038/s41579-020-0402-3 González-Teuber, 2017, Effects of root endophytic fungi on response of Chenopodium quinoa to drought stress, Plant Ecol., 219, 231, 10.1007/s11258-017-0791-1 Grace, 2009, Arbuscular mycorrhizal inhibition of growth in barley cannot be attributed to extent of colonization, fungal phosphorus uptake or effects on expression of plant phosphate transporter genes, New Phytol., 181, 938, 10.1111/j.1469-8137.2008.02720.x Greenfield, 2015, A novel method to scale up fungal endophyte isolations, Biocontrol Sci. Technol., 25, 1208, 10.1080/09583157.2015.1033382 Grosch, 2006, Fungal antagonists of the plant pathogen Rhizoctonia solani: selection, control efficacy and influence on the indigenous microbial community, Mycol. Res., 110, 1464, 10.1016/j.mycres.2006.09.014 Guerrero-Galan, 2019, Ectomycorrhizal symbiosis helps plants to challenge salt stress conditions, Mycorrhiza, 29, 291, 10.1007/s00572-019-00894-2 Guerrieri, 2004, Do interactions between plant roots and the rhizosphere affect parasitoid behaviour?, Ecol. Entomol., 29, 753, 10.1111/j.0307-6946.2004.00644.x Gupta, 2021, Alleviation of salinity stress in plants by endophytic plant-fungal symbiosis: current knowledge, perspectives and future directions, Plant Soil, 461, 219, 10.1007/s11104-020-04618-w Habte, 2001 Hagh-Doust, 2017, Community analysis of Persian oak fungal microbiome under dust storm conditions, Fungal Ecol., 29, 1, 10.1016/j.funeco.2017.05.002 Hagh Doust, 2019, Culture based methods using low temperature incubation revealed cold adapted fungal endophytes from semiarid forests, Forest Pathol., 49, e12515, 10.1111/efp.12515 Hajiboland, 2019, Arbuscular mycorrhizal fungi alleviate low-temperature stress and increase freezing resistance as a substitute for acclimation treatment in barley, Crop Pasture Sci., 70, 218, 10.1071/CP18385 Hallett, 2009, Disentangling the impact of AM fungi versus roots on soil structure and water transport, Plant Soil, 314, 183, 10.1007/s11104-008-9717-y Hardoim, 2015, The hidden world within plants: ecological and evolutionary considerations for defining functioning of microbial endophytes, Microbiol. Mol. Biol. Rev., 79, 293, 10.1128/MMBR.00050-14 Hart, 2018, Fungal inoculants in the field: is the reward greater than the risk?, Funct. Ecol., 32, 126, 10.1111/1365-2435.12976 Hartley, 2009, Impacts of plant symbiotic fungi on insect herbivores: mutualism in a multitrophic context, Annu. Rev. Entomol., 54, 323, 10.1146/annurev.ento.54.110807.090614 Hawkins, 2000, Uptake and transport of organic and inorganic nitrogen by arbuscular mycorrhizal fungi, Plant Soil., 226, 275, 10.1023/A:1026500810385 Hellwig, 2002, Altersetin, a new antibiotic from cultures of endophytic Alternaria spp. taxonomy, fermentation, isolation, structure elucidation and biological activities, J. Antibiot., 55, 881, 10.7164/antibiotics.55.881 Henriksson, 2021, The mycorrhizal tragedy of the commons, Ecol. Lett., 24, 1215, 10.1111/ele.13737 Higgins, 2007, Phylogenetic relationships, host affinity, and geographic structure of boreal and arctic endophytes from three major plant lineages, Mol. Phylogenet. Evol., 42, 543, 10.1016/j.ympev.2006.07.012 Hoeksema, 2010, A meta-analysis of context-dependency in plant response to inoculation with mycorrhizal fungi, Ecol. Lett., 13, 394, 10.1111/j.1461-0248.2009.01430.x Hoffland, 2003, Feldspar tunneling by fungi along natural productivity gradients, Ecosystems., 6, 739, 10.1007/s10021-003-0191-3 Homolka, 2014, Preservation of live cultures of basidiomycetes - recent methods, Fungal Biol., 118, 107, 10.1016/j.funbio.2013.12.002 Homolka, 2003, Viability of basidiomycete strains after cryopreservation: comparison of two different freezing protocols, Folia Microbiol., 48, 219, 10.1007/BF02930959 Houseknecht, 2012, Viability of fastidious Phytophthora following different cryopreservation treatments, Fungal Biol-Uk, 116, 1081, 10.1016/j.funbio.2012.08.001 Humber, 1994, Special considerations for operating a culture collection of fastidious fungal pathogens, J. Ind. Microbiol., 13, 195, 10.1007/BF01584009 Hunt, 2005, Near-term impacts of elevated CO2, nitrogen and fungal endophyte-infection on Lolium perenne L. growth, chemical composition and alkaloid production, Plant Cell Environ., 28, 1345, 10.1111/j.1365-3040.2005.01367.x IJdo, 2011, Methods for large-scale production of AM fungi: past, present, and future, Mycorrhiza, 21, 1, 10.1007/s00572-010-0337-z Iotti, 2012, 145 Janouskova, 2017, Inoculation effects on root-colonizing arbuscular mycorrhizal fungal communities spread beyond directly inoculated plants, PLoS One, 12, e0181525, 10.1371/journal.pone.0181525 Jansa, 2000, In vitro and post vitro inoculation of micropropagated Rhododendrons with ericoid mycorrhizal fungi, Appl. Soil Ecol., 15, 125, 10.1016/S0929-1393(00)00088-3 Johnson, 1992, Survival of wood-inhabiting fungi stored for 10 Years in water and under oil, Can. J. Microbiol., 38, 861, 10.1139/m92-140 Kafle, 2019, Harnessing soil microbes to improve plant phosphate efficiency in cropping systems, Agronomy-Basel, 9, 127, 10.3390/agronomy9030127 Kaminsky, 2019, The inherent conflicts in developing soil microbial inoculants, Trends Biotechnol., 37, 140, 10.1016/j.tibtech.2018.11.011 Karwa, 2011, 429 Katoch, 2017, Phylogeny, antimicrobial, antioxidant and enzyme-producing potential of fungal endophytes found in Viola odorata, Ann. Microbiol., 67, 529, 10.1007/s13213-017-1283-1 Khan, 2016, Endophytic fungi from frankincense tree improves host growth and produces extracellular enzymes and indole acetic acid, PLoS One, 11, e0158207, 10.1371/journal.pone.0158207 Khan, 2015, Plant growth-promoting potential of endophytic fungi isolated from Solanum nigrum leaves, World J. Microbiol. Biotechnol., 31, 1461, 10.1007/s11274-015-1888-0 Khiralla, 2016, Endophytic fungi: occurrence, classification, function and natural products, 1 Koch, 2011, The effects of arbuscular mycorrhizal (AM) fungal and garlic mustard introductions on native AM fungal diversity, Biol. Invasions, 13, 1627, 10.1007/s10530-010-9920-7 Kohout, 2017, 179 Kuek, 1996, Shake flask culture of Laccaria laccata, an ectomycorrhizal basidiomycete, Appl. Microbiol. Biotechnol., 45, 319, 10.1007/s002530050690 Kumar, 2004, Biodiversity and tissue-recurrence of endophytic fungi in Tripterygium wilfordii, Fungal Divers., 17, 69 Kusari, 2012, Chemical ecology of endophytic fungi: origins of secondary metabolites, Chem. Biol., 19, 792, 10.1016/j.chembiol.2012.06.004 Kuske, 2015, Prospects and challenges for fungal metatranscriptomics of complex communities, Fungal Ecol., 14, 133, 10.1016/j.funeco.2014.12.005 Kuyper, 2014, The danger of mycorrhizal traps?, New Phytol., 203, 352, 10.1111/nph.12883 Lacerda, 2018, Diversity of endophytic fungi in Eucalyptus microcorys assessed by complementary isolation methods, Mycol. Prog., 17, 719, 10.1007/s11557-018-1385-6 Lal, 2004, Soil carbon sequestration to mitigate climate change, Geoderma, 123, 1, 10.1016/j.geoderma.2004.01.032 Lalaymia, 2014, Maintenance and preservation of ectomycorrhizal and arbuscular mycorrhizal fungi, Mycorrhiza, 24, 323, 10.1007/s00572-013-0541-8 Lamhamedi, 1992, Growth, nutrition and response to water stress of Pinus pinaster inoculated with ten dikaryotic strains of Pisolithus sp, Tree Physiol., 10, 153, 10.1093/treephys/10.2.153 Lapeyrie, 1985, Some factors influencing viability of ectomycorrhizal fungal inoculum, New Phytol., 100, 585, 10.1111/j.1469-8137.1985.tb02805.x Lata, 2018, Induction of abiotic stress tolerance in plants by endophytic microbes, Lett. Appl. Microbiol., 66, 268, 10.1111/lam.12855 Lehto, 2008, Freezing tolerance of ectomycorrhizal fungi in pure culture, Mycorrhiza, 18, 385, 10.1007/s00572-008-0190-5 Lekberg, 2005, Is plant performance limited by abundance of arbuscular mycorrhizal fungi? A meta-analysis of studies published between 1988 and 2003, New Phytol., 168, 189, 10.1111/j.1469-8137.2005.01490.x Lin, 2020, Zinc resistance of six dark septate endophytic fungi and the growth response of tomato, Appl. Ecol. Environ. Res., 18, 389, 10.15666/aeer/1801_389400 Liu, 2001, Antifungal activity of Artemisia annua endophyte cultures against phytopathogenic fungi, J. Biotechnol., 88, 277, 10.1016/S0168-1656(01)00285-1 Lopez-Llorca, 2006, 191 Lopez-Raez, 2009, Strigolactones: ecological significance and use as a target for parasitic plant control, Pest Manag. Sci., 65, 471, 10.1002/ps.1692 Luginbuehl, 2017, Fatty acids in arbuscular mycorrhizal fungi are synthesized by the host plant, Science, 356, 1175, 10.1126/science.aan0081 Lugtenberg, 2013, Plant growth promotion by microbes, Molecular Microbial Ecology of the Rhizosphere, 2, 561 Luo, 2020, Soil carbon, nitrogen, and phosphorus cycling microbial populations and their resistance to global change depend on soil C:N:P stoichiometry, mSystems, 5, e00162, 10.1128/mSystems.00162-20 Ma, 2011, Tolerance of ectomycorrhizal fungus mycelium to low temperature and freezing–thawing, Can. J. Microbiol., 57, 328, 10.1139/w11-001 Magallon-Servin, 2020, Designing a multi-species inoculant of phosphate rock-solubilizing bacteria compatible with arbuscular mycorrhizae for plant growth promotion in low-P soil amended with PR, Biol. Fertil. Soils, 56, 521, 10.1007/s00374-020-01452-1 Mahohi, 2020, The performance of mycorrhizae, rhizobacteria, and earthworms to improve Bermuda grass (Cynodon dactylon) growth and Pb uptake in a Pb-contaminated soil, Environ. Sci. Pollut. Res., 28, 3019, 10.1007/s11356-020-10636-z Malinowski, 1997, Growth and water status in meadow fescue (Festuca pratensis) is differently affected by its two natural endophytes, Agron. J., 89, 673, 10.2134/agronj1997.00021962008900040021x Malinowski, 2019, Epichloë (formerly Neotyphodium) fungal endophytes increase adaptation of cool-season perennial grasses to environmental stresses, Acta Agrobot., 72, 1767, 10.5586/aa.1767 Mandal, 2010, Phenolic acids act as signaling molecules in plant-microbe symbioses, Plant Signal. Behav., 5, 359, 10.4161/psb.5.4.10871 Mandyam, 2005, Seeking the elusive function of the root-colonising dark septate endophytic fungi, Stud. Mycol., 53, 173, 10.3114/sim.53.1.173 Marjanovic, 2005, Aquaporins in poplar: what a difference a symbiont makes, Planta, 222, 258, 10.1007/s00425-005-1539-z Marjanovic, 2005, Mycorrhiza formation enhances adaptive response of hybrid poplar to drought. Biophysics from Molecules to Brain: in Memory of Radoslav K, Andjus, 1048, 496 Marx, 1981, Variability in ectomycorrhizal development and growth among isolates of pisolithus-tinctorius as affected by source, age, and reisolation, Canadian Journal of Forest Research-Revue Canadienne De Recherche Forestiere, 11, 168, 10.1139/x81-022 Massimo, 2015, Fungal endophytes in aboveground tissues of desert plants: infrequent in culture, but highly diverse and distinctive symbionts, Microb. Ecol., 70, 61, 10.1007/s00248-014-0563-6 Mathur, 2018, Improved photosynthetic efficacy of maize (Zea mays) plants with arbuscular mycorrhizal fungi (AMF) under high temperature stress, J. Photochem. Photobiol., B, 180, 149, 10.1016/j.jphotobiol.2018.02.002 Meena, 2017, Abiotic stress responses and microbe-mediated mitigation in plants: the omics strategies, Front. Plant Sci., 8, 172, 10.3389/fpls.2017.00172 Mehmood, 2019, In vitro production of IAA by endophytic fungus Aspergillus awamori and its growth promoting activities in Zea mays, Symbiosis, 77, 225, 10.1007/s13199-018-0583-y Mensah, 2015, High functional diversity within species of arbuscular mycorrhizal fungi is associated with differences in phosphate and nitrogen uptake and fungal phosphate metabolism, Mycorrhiza, 25, 533, 10.1007/s00572-015-0631-x Mickan, 2019, Soil disturbance and water stress interact to influence arbuscular mycorrhizal fungi, rhizosphere bacteria and potential for N and C cycling in an agricultural soil, Biol. Fertil. Soils, 55, 53, 10.1007/s00374-018-1328-z Miransari, 2011, Soil microbes and plant fertilization, Appl. Microbiol. Biotechnol., 92, 875, 10.1007/s00253-011-3521-y Moghaddam, 2021, Desert-adapted fungal endophytes induce salinity and drought stress resistance in model crops, Plant Physiol. Biochem., 160, 225, 10.1016/j.plaphy.2021.01.022 Moricca, 2008, Fungal endophytes in Mediterranean oak forests: a lesson from Discula quercina, Phytopathology, 98, 380, 10.1094/PHYTO-98-4-0380 Munns, 2008, Mechanisms of salinity tolerance, Annu. Rev. Plant Biol., 59, 651, 10.1146/annurev.arplant.59.032607.092911 Murphy, 2014, Yield increase induced by the fungal root endophyte Piriformospora indica in barley grown at low temperature is nutrient limited, Symbiosis, 62, 29, 10.1007/s13199-014-0268-0 Naidoo, 2019, The road to resistance in forest trees, Front. Plant Sci., 10, 273, 10.3389/fpls.2019.00273 Nakasone, 2004, 37 Norman, 2000, Sporulation of Phytophthora fragariae shows greater stimulation by exudates of non-mycorrhizal than by mycorrhizal strawberry roots, Mycol. Res., 104, 1069, 10.1017/S0953756299002191 Obase, 2011, Regeneration of ectomycorrhizal fungal isolates following deep freezer storage, Mycobiology, 39, 133, 10.4489/MYCO.2011.39.2.133 Ollerstam, 2003, Salicylic acid mediates resistance in the willow Salix viminalis against the gall midge Dasineura marginemtorquens, J. Chem. Ecol., 29, 163, 10.1023/A:1021936832258 Onions, 1971, 113 Pal, 2006, Biological control of plant pathogens, The Plant Health Instructor, 10 Parsa, 2013, Establishing fungal entomopathogens as endophytes: towards endophytic biological control, Jove-J Vis Exp., 11, e50360 Paulus, 2003, Estimation of microfungal diversity in tropical rainforest leaf litter using particle filtration: the effects of leaf storage and surface treatment, Mycol. Res., 107, 748, 10.1017/S0953756203007913 Pearson, 1973, The biology of mycorrhiza in the Ericaceae: I. The isolation of the endophyte and synthesis of mycorrhizas in aseptic culture, New Phytol., 72, 371, 10.1111/j.1469-8137.1973.tb02044.x Pellitier, 2021, Ectomycorrhizal access to organic nitrogen mediates CO2 fertilization response in a dominant temperate tree, Nat. Commun., 12, 5403, 10.1038/s41467-021-25652-x Plassard, 2019, Phosphorus transport in mycorrhiza: how far are we?, Trends Plant Sci., 24, 794, 10.1016/j.tplants.2019.06.004 Plenchette, 2003, Long-term viability and infectivity of intraradical forms of Glomus intraradices vesicles encapsulated in alginate beads, Mycol. Res., 107, 614, 10.1017/S0953756203007482 Porcel, 2011, Salinity stress alleviation using arbuscular mycorrhizal fungi, A review. Agronomy for Sustainable Development, 32, 181, 10.1007/s13593-011-0029-x Porras-Alfaro, 2007, Mycorrhizal fungi of Vanilla: diversity, specificity and effects on seed germination and plant growth, Mycologia, 99, 510, 10.1080/15572536.2007.11832545 Poulsen, 2005, Physiological and molecular evidence for Pi uptake via the symbiotic pathway in a reduced mycorrhizal colonization mutant in tomato associated with a compatible fungus, New Phytol., 168, 445, 10.1111/j.1469-8137.2005.01523.x Pozo, 2010, 193 Prior, 2014, New isolation method for endophytes based on enzyme digestion, Mycol. Prog., 13, 849, 10.1007/s11557-014-0968-0 Promputtha, 2010, Can leaf degrading enzymes provide evidence that endophytic fungi becoming saprobes?, Fungal Divers., 41, 89, 10.1007/s13225-010-0024-6 Quiroga, 2017, Enhanced drought stress tolerance by the arbuscular mycorrhizal symbiosis in a drought-sensitive maize cultivar is related to a broader and differential regulation of host plant aquaporins than in a drought-tolerant cultivar, Front. Plant Sci., 8, 1056, 10.3389/fpls.2017.01056 Rakotoniriana, 2008, Endophytic fungi from leaves of Centella asiatica: occurrence and potential interactions within leaves, Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology, 93, 27, 10.1007/s10482-007-9176-0 Repáč, 2011, 43 Reynolds, 2005, Arbuscular mycorrhizal fungi do not enhance nitrogen acquisition and growth of old-field perennials under low nitrogen supply in glasshouse culture, New Phytol., 167, 869, 10.1111/j.1469-8137.2005.01455.x Rho, 2017, Do endophytes promote growth of host plants under stress? A meta-analysis on plant stress mitigation by endophytes, Microb. Ecol., 75, 407, 10.1007/s00248-017-1054-3 Rivero, 2021, Mycorrhizal symbiosis primes the accumulation of antiherbivore compounds and enhances herbivore mortality in tomato, J. Exp. Bot., 72, 5038, 10.1093/jxb/erab171 Rodriguez, 2008, Stress tolerance in plants via habitat-adapted symbiosis, ISME J., 2, 404, 10.1038/ismej.2007.106 Rodriguez, 2009, Fungal endophytes: diversity and functional roles, New Phytol., 182, 314, 10.1111/j.1469-8137.2009.02773.x Rossi, 2007, Inoculant production of ectomycorrhizal fungi by solid and submerged Fermentations, Food Technol. Biotechnol., 45, 277 Rossi, 2002, Inoculum production of the ectomycorrhizal fungus Pisolithus microcarpus in an airlift bioreactor, Appl. Microbiol. Biotechnol., 59, 175, 10.1007/s00253-002-0999-3 Ruiz-Lozano, 2003, Arbuscular mycorrhizal symbiosis and alleviation of osmotic stress. New perspectives for molecular studies, Mycorrhiza, 13, 309, 10.1007/s00572-003-0237-6 Sabra, 2018, Beneficial root endophytic fungi increase growth and quality parameters of sweet basil in heavy metal contaminated soil, Front. Plant Sci., 9, 1726, 10.3389/fpls.2018.01726 Saleh, 2020, Global metabolic changes induced by arbuscular mycorrhizal fungi in oregano plants grown under ambient and elevated levels of atmospheric CO2, Plant Physiol Bioch, 151, 255, 10.1016/j.plaphy.2020.03.026 Salomon, 2022, Global evaluation of commercial arbuscular mycorrhizal inoculants under greenhouse and field conditions, Appl. Soil Ecol., 169, 104225, 10.1016/j.apsoil.2021.104225 Scherlach, 2020, Chemical mediators at the bacterial-fungal interface, Annu. Rev. Microbiol., 74, 267, 10.1146/annurev-micro-012420-081224 Schulz, 1998, Endophyte-host interactions. II. Defining symbiosis of the endophyte-host interaction, Symbiosis, 25, 213 Schulz, 2006, 9, 380 Sebastiana, 2018, Ectomycorrhizal inoculation with Pisolithus tinctorius reduces stress induced by drought in cork oak, Mycorrhiza, 28, 247, 10.1007/s00572-018-0823-2 Sebastiana, 2019, The leaf lipid composition of ectomycorrhizal oak plants shows a drought-tolerance signature, Plant Physiol Bioch, 144, 157, 10.1016/j.plaphy.2019.09.032 Selvakumar, 2016, Trap culture technique for propagation of arbuscular mycorrhizal fungi using different host plants, Korean Journal of Soil Science and Fertilizer, 49, 608, 10.7745/KJSSF.2016.49.5.608 Sieber, 2002, 887 Silva, 2006, Cadinane sesquiterpenoids of Phomopsis cassiae, an endophytic fungus associated with Cassia spectabilis (Leguminosae), Phytochemistry, 67, 1964, 10.1016/j.phytochem.2006.06.004 Singh, 2014, Unraveling the role of fungal symbionts in plant abiotic stress tolerance, Plant Signal. Behav., 6, 175, 10.4161/psb.6.2.14146 Smith, 1998, The use of cryopreservation in the ex-situ conservation of fungi, Cryo-Letters, 19, 79 Smith, 1994, The preservation and maintenance of living fungi, 2, 122 Smith, 2012, Implementing best practices and validation of cryopreservation techniques for microorganisms, Sci. World J., 2012, 805659, 10.1100/2012/805659 Smith, 2008 Smith, 2011, Roles of arbuscular mycorrhizas in plant nutrition and growth: new paradigms from cellular to ecosystem scales, Annu. Rev. Plant Biol., 62, 227, 10.1146/annurev-arplant-042110-103846 Smith, 2012, Fresh perspectives on the roles of arbuscular mycorrhizal fungi in plant nutrition and growth, Mycologia, 104, 1, 10.3852/11-229 Song, 2017, Effect of endophytic fungi on the host plant growth, expression of expansin gene and flavonoid content in Tetrastigma hemsleyanum Diels & Gilg ex Diels, Plant Soil, 417, 393, 10.1007/s11104-017-3266-1 Song, 2014, Hijacking common mycorrhizal networks for herbivore-induced defence signal transfer between tomato plants, Sci Rep-Uk, 4, 1 Sudheer, 2021, Arbuscular mycorrhizal fungi: interactions with plant and their role, 45 Tacon, 1985, Efficiency in a forest nursery of an ectomycorrhizal fungus inoculum produced in a fermentor and entrapped in polymeric gels, Can. J. Bot., 63, 1664, 10.1139/b85-229 Tadych, 2007, Evaluation of the potential role of water in spread of conidia of the Neotyphodium endophyte of Poa ampla, Mycol. Res., 111, 466, 10.1016/j.mycres.2007.02.002 Tanaka, 2006, Reactive oxygen species play a role in regulating a fungus–perennial ryegrass mutualistic interaction, Plant Cell, 18, 1052, 10.1105/tpc.105.039263 Tao, 2016, Arbuscular mycorrhizal fungi affect plant tolerance and chemical defences to herbivory through different mechanisms, J. Ecol., 104, 561, 10.1111/1365-2745.12535 Tefera, 2009, Effect of inoculation method and plant growth medium on endophytic colonization of sorghum by the entomopathogenic fungus Beauveria bassiana, Biocontrol, 54, 663, 10.1007/s10526-009-9216-y Tejesvi, 2005, Endophytic fungal assemblages from inner bark and twig of Terminalia arjuna W. & A. (Combretaceae), World J. Microbiol. Biotechnol., 21, 1535, 10.1007/s11274-005-7579-5 Teste, 2019, Dual-mycorrhizal plants: their ecology and relevance, New Phytol., 225, 1835, 10.1111/nph.16190 Thiem, 2020, Halotolerant fungi stimulate growth and mitigate salt stress in Alnus glutinosa Gaertn, Dendrobiology, 83, 30, 10.12657/denbio.083.003 Thomson, 1993, Improving the colonization capacity and effectiveness of ectomycorrhizal fungal cultures by association with a host-plant and Re-isolation, Mycol. Res., 97, 839, 10.1016/S0953-7562(09)81159-3 Tibbett, 2002, Ectomycorrhizal symbiosis can enhance plant nutrition through improved access to discrete organic nutrient patches of high resource quality, Ann Bot-London, 89, 783, 10.1093/aob/mcf129 Tripathi, 2008, 281 Tsulsiyah, 2021, Important role of mycorrhiza for seed germination and growth of dendrobium orchids, Journal of Tropical Biodiversity and Biotechnology, 6, 60805, 10.22146/jtbb.60805 Turbat, 2020, Characterization of the plant growth-promoting activities of endophytic fungi isolated from Sophora flavescens, Microorganisms, 8, 1, 10.3390/microorganisms8050683 U'Ren, 2012, Host and geographic structure of endophytic and endolichenic fungi at a continental scale, Am. J. Bot., 99, 898, 10.3732/ajb.1100459 Unterseher, 2009, Dilution-to-extinction cultivation of leaf-inhabiting endophytic fungi in beech (Fagus sylvatica L.) - different cultivation techniques influence fungal biodiversity assessment, Mycol. Res., 113, 645, 10.1016/j.mycres.2009.02.002 Urcelay, 2003, The mycorrhizal dependence of subordinates determines the effect of arbuscular mycorrhizal fungi on plant diversity, Ecol. Lett., 6, 388, 10.1046/j.1461-0248.2003.00444.x Varma, 1994, Utilization of cell-wall related carbohydrates by ericoid mycorrhizal endophytes, Symbiosis, 16, 301 Vassilev, 2015, Unexploited potential of some biotechnological techniques for biofertilizer production and formulation, Appl. Microbiol. Biotechnol., 99, 4983, 10.1007/s00253-015-6656-4 Velmala, 2014, Profiling functions of ectomycorrhizal diversity and root structuring in seedlings of Norway spruce (Picea abies) with fast-and slow-growing phenotypes, New Phytol., 201, 610, 10.1111/nph.12542 Verbruggen, 2013, Mycorrhizal fungal establishment in agricultural soils: factors determining inoculation success, New Phytol., 197, 1104, 10.1111/j.1469-8137.2012.04348.x Verma, 2011, Endophytic fungal flora from roots and fruits of an Indian neem plant Azadirachta indica A. Juss., and impact of culture media on their isolation, Indian J. Microbiol., 51, 469, 10.1007/s12088-011-0121-6 Vicari, 2002, Combined effect of foliar and mycorrhizal endophytes on an insect herbivore, Ecology, 83, 2452, 10.1890/0012-9658(2002)083[2452:CEOFAM]2.0.CO;2 Vimal, 2017, Soil-plant-microbe interactions in stressed agriculture management: a review, Pedosphere, 27, 177, 10.1016/S1002-0160(17)60309-6 Vosatka, 2012, Development of arbuscular mycorrhizal biotechnology and industry: current achievements and bottlenecks, Symbiosis, 58, 29, 10.1007/s13199-012-0208-9 Vuorinen, 2015, Development of growth media for solid substrate propagation of ectomycorrhizal fungi for inoculation of Norway spruce (Picea abies) seedlings, Mycorrhiza, 25, 311, 10.1007/s00572-014-0611-6 Walker, 1999, Methods for culturing and isolating arbuscular mycorrhizal fungi, Mycorrhiza News, 11, 2 Wang, 2014, Molecular cloning and expression of a novel laccase showing thermo- and acid-stability from the endophytic fungus Phomopsis liquidambari and its potential for growth promotion of plants, Biotechnol. Lett., 36, 167, 10.1007/s10529-013-1347-7 Wang, 2021, Effects of ectomycorrhizal fungi (Suillus variegatus) on the growth, hydraulic function, and non-structural carbohydrates of Pinus tabulaeformis under drought stress, BMC Plant Biol., 21, 171, 10.1186/s12870-021-02945-3 Waqas, 2012, Endophytic fungi produce gibberellins and indoleacetic acid and promotes host-plant growth during stress, Molecules, 17, 10754, 10.3390/molecules170910754 Warcup, 1967, Perfect states of Rhizoctonias associated with orchids, New Phytol., 66, 631, 10.1111/j.1469-8137.1967.tb05434.x Whipps, 2004, Prospects and limitations for mycorrhizas in biocontrol of root pathogens, Canadian Journal of Botany-Revue Canadienne De Botanique, 82, 1198 White, 2010, Is plant endophyte-mediated defensive mutualism the result of oxidative stress protection?, Physiol. Plantarum, 138, 440, 10.1111/j.1399-3054.2009.01332.x White, 1996, Endophyte-host associations in grasses. XXII. Conidia formation by Acremonium endophytes on the phylloplanes of Agrostis hiemalis and Poa rigidifolia, Mycologia, 88, 174, 10.1080/00275514.1996.12026641 White, 1992, Acremonium endophyte effects on tall fescue drought tolerance, Crop Sci., 32, 1392, 10.2135/cropsci1992.0011183X003200060017x White, 2012, 424 Wu, 2012, Effects of ectomycorrhizal fungus Boletus edulis and mycorrhiza helper Bacillus cereus on the growth and nutrient uptake by Pinus thunbergii, Biol. Fertil. Soils, 48, 385, 10.1007/s00374-011-0638-1 Yao, 2009, Effect of arbuscular mycorrhizal fungal inoculation on root system architecture of trifoliate orange (Poncirus trifoliata L. Raf.) seedlings, Sci. Hortic., 121, 458, 10.1016/j.scienta.2009.03.013 Yin, 2020, The enhancement effect of calcium ions on ectomycorrhizal fungi-mediated drought resistance in Pinus sylvestris var. mongolica, J. Plant Growth Regul., 40, 1389, 10.1007/s00344-020-10197-y You, 2009, Antifungal secondary metabolites from endophytic Verticillium sp, Biochem. Systemat. Ecol., 37, 162, 10.1016/j.bse.2009.03.008 Yuan, 2016, The primary mechanism of endophytic fungus Gilmaniella sp AL12 promotion of plant growth and sesquiterpenoid accumulation in Atractylodes lancea, Plant Cell Tiss Org, 125, 571, 10.1007/s11240-016-0971-z Yun, 2018, Piriformospora indica improves salinity stress tolerance in Zea mays L. plants by regulating Na+ and K+ loading in root and allocating K+ in shoot, Plant Growth Regul., 86, 323, 10.1007/s10725-018-0431-3 Zhang, 2010, Effect of the ectomycorrhizal fungus paxillus involutus on growth and cation (potassium, calcium, and magnesium) nutrition of Pinus sylvestris L. In semi-hydroponic culture, J. Plant Nutr., 33, 736, 10.1080/01904160903575956 Zhu, 2008, A novel technique for isolating orchid mycorrhizal fungi, Fungal Divers., 33, 123 Zhu, 2010, Arbuscular mycorrhizae improves low temperature stress in maize via alterations in host water status and photosynthesis, Plant Soil, 331, 129, 10.1007/s11104-009-0239-z Zhu, 2010, Influence of arbuscular mycorrhiza on lipid peroxidation and antioxidant enzyme activity of maize plants under temperature stress, Mycorrhiza, 20, 325, 10.1007/s00572-009-0285-7 Zia, 2021, Plant survival under drought stress: implications, adaptive responses, and integrated rhizosphere management strategy for stress mitigation, Microbiol. Res., 242, 126626, 10.1016/j.micres.2020.126626 Zou, 2020, Unravelling the role of arbuscular mycorrhizal fungi in mitigating the oxidative burst of plants under drought stress, Plant Biol., 23, 50, 10.1111/plb.13161