Submergence Tolerant Rice: SUB1’s Journey from Landrace to Modern Cultivar
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Angaji S, Septiningsih EM, Mackill DJ, Ismail AM. QTLs associated with tolerance of anaerobic conditions during germination in rice (Oryza sativa L.). Euphytica. 2010;172:159–68.
Bailey-Serres J, Voesenek LACJ. Flooding stress: acclimations and genetic diversity. Annu Rev Plant Biol. 2008;59:313–39.
Das KK, Sarkar RK, Ismail AM. Elongation ability and non-structural carbohydrate levels in relation to submergence tolerance in rice. Plant Sci. 2005;168:131–136.
Das KK, Panda D, Sarkar RK, Reddy JN, Ismail AM. Submergence tolerance in relation to variable floodwater conditions in rice. Environ Exp Bot. 2009;66:425–34.
Ella E, Kawano N, Yamauchi Y, Tanaka K, Ismail AM. Blocking ethylene perception enhances flooding tolerance in rice seedlings. Funct Plant Biol. 2003;30:813–9.
Ella ES, Dionisio-Sese ML, Ismail AM. Proper management improves seedling survival and growth during early flooding in contrasting rice (Oryza sativa L.) genotypes. Crop Sci. 2010. doi:10.2135/cropsci201.
Fukao T, Bailey-Serres J. Submergence tolerance conferred by Sub1A is mediated by SLR1 and SLRL1 restriction of gibberellin responses in rice. Proc Natl Acad Sci USA. 2008;105:16814–9.
Fukao T, Xu K, Ronald PC, Bailey-Serres J. A variable cluster of ethylene response factor-like genes regulates metabolic and developmental acclimation responses to submergence in rice. Plant Cell. 2006;18:2021–34.
Fukao T, Harris T, Bailey-Serres J. Evolutionary analysis of the Sub1 gene cluster that confers submergence tolerance to domesticated rice. Ann Bot. 2009;103:143–50.
Haque QA, Hille D, Lambers R, Tepora NM, Cruz QD. Inheritance of submergence tolerance in rice. Euphytica. 1989;41:247–51.
Hattori Y, Nagai K, Furukawa S, Song XJ, Kawano R, Sakakibara H, et al. The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water. Nature. 2009;460:1026–30.
HilleRisLambers D, Vergara BS. Summary results of an international collaboration on screening methods for flood tolerance. Proceedings of the 1981 International Deepwater Rice Workshop. International Rice Research Institute, Los Baños, Philippines; 1982. p. 347–353.
Huke RE, Huke EH. Rice area by type of culture. South, Southeast, and East Asia. A revised and updated database. International Rice Research Institute, Los Baños, Philippines; 1997.
Ismail AM, Ella ES, Vergara GV, Mackill DJ. Mechanisms associated with tolerance to flooding during germination and early seedling growth in rice (Oryza sativa). Ann Bot. 2009;103:197–209.
Jackson MB, Ram PC. Physiological and molecular basis of susceptibility and tolerance of rice plants to complete submergence. Ann Bot. 2003;91:227–41.
Jung K-H, Seo Y-S, Walia H, Cao P, Amonpant F, Fukao T, et al. The submergence tolerance regulator Sub1A mediates stress-responsive expression of AP2/ERF transcription factors. Plant Physiol. 2010;152:1674–92.
Kende H, van der Knaap E, Cho HT. Deepwater rice: a model plant to study stem elongation. Plant Physiol. 1998;118:1105–10.
Khush GS. Terminology of rice growing environments. Manila, Philippines: International Rice Research Institute; 1984. p. 5–10.
Mackill DJ. Breeding for resistance to abiotic stresses in rice: the value of quantitative trait loci. In: Lamkey KR, Lee M, editors. Plant breeding: the Arnel R Hallauer International Symposium. Ames: Blackwell Publishing; 2006. p. 201–12.
Mackill DJ, Amante MM, Vergara BS, Sarkarung S. Improved semi-dwarf rice lines with tolerance to submergence of seedlings. Crop Sci. 1993;33:749–75.
Mackill DJ, Coffman WR, Garrity DP. Rainfed lowland rice improvement. Los Banos, The Philippines: International Rice Research Institute; 1996.
Manzanilla DO, Paris TR, Vergara GV, Ismail AM, Pandey S, Labios RV, Tatlonghari GT, Acda RD, Chi TTN, Duoangsila K, Siliphouthone I, Manikmas MOA, Mackill DJ. Submergence risks and farmers’ preferences: implications for breeding Sub1 rice in Southeast Asia 2010;(in press).
Mishra SB, Senadhira D, Manigbas NL. Genetics of submergence tolerance in rice (Oryza sativa L.). Field Crops Res. 1996;46:177–81.
Mohanty HK, Chaudhary RC. Breeding for submergence tolerance in rice in India. In: Progress in rainfed lowland rice. Manila:International Rice Research Institute, 1986;191–200.
Mohanty HK, Khush GS. Diallel analysis of submergence tolerance in rice, Oryza sativa L. Theor Appl Genet. 1985;70:467–73.
Mohanty HK, Suprihatno B, Khush GS, Coffman WR, Vergara BS. Inheritance of submergence tolerance in deepwater rice. Proceedings of the 1981 International Deepwater Rice Workshop. International Rice Research Institute, Los Baños, Philippines; 1982. p. 121–134.
Nandi SP, Subudhi K, Senadhira D, Manigbas NL, Sen-Mand S, Huang N. Mapping QTLs for submergence tolerance in rice by AFLP analysis and selective genotyping. Mol Gen Genet. 1997;255:1–8.
Neeraja C, Maghirang-Rodriguez R, Pamplona A, Heuer S, Collard B, Septiningsih E, et al. A marker-assisted backcross approach for developing submergence-tolerance rice cultivars. Theor Appl Genet. 2007;115:767–76.
Pedersen O, Rich SM, Colmer TD. Surviving floods: leaf gas films improve O2 and CO2 exchange, root aeration, and growth of completely submerged rice. Plant J. 2009;58:147–56.
Saika H, Okamoto M, Miyoshi K, Kushiro T, Shinoda S, Jikumaru Y, et al. Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8′-hydroxylase in rice. Plant Cell Physiol. 2007;48:287–98.
Sarkar RK, Reddy JN, Sharma SG, Ismail AM. Physiological basis of submergence tolerance in rice and implications for crop improvement. Curr Sci. 2006;91:899–906.
Sarkar RK, Panda D, Reddy JN, Patnaik SSC, Mackill DJ, Ismail AM. Performance of submergence tolerant rice genotypes carrying the Sub1 QTL under stressed and non-stressed natural field conditions. Indian J Agric Sci. 2009;79:876–83.
Septiningsih EM, Pamplona AM, Sanchez DL, Neeraja CN, Vergara GV, Heuer S Ismail AM, Mackill DJ. Development of submergence tolerant rice cultivars: the Sub1 locus and beyond. Ann Bot. 2009; 103:151–160.
Setter TL, Laureles EV. The beneficial effect of reduced elongation growth on submergence tolerance of rice. J Exp Bot. 1996;47:1551–9.
Setter TL, Ellis M, Laureles EV, Ella ES, Senadhira D, Mishra SB, et al. Physiology and genetics of submergence tolerance in rice. Ann Bot. 1997;79(Suppl):67–77.
Siangliw M, Toojinda T, Tragoonrung S, Vanavichit A. Thai jasmine rice carrying QTLch9 (SubQTL) is submergence tolerant. Ann Bot. 2003;91:255–61.
Singh HP, Sing BB, Ram PC. Submergence tolerance of rainfed lowland rice: search for physiological marker traits. J Plant Physiol. 2001;158:883–9.
Singh S, Mackill DJ, Ismail AM. Responses of SUB1 rice introgression lines to submergence in the field: yield and grain quality. Field Crop Res. 2009;113:12–23.
Singh N, Dang T, Vergara G, Pandey D, Sanchez D, Neeraja C, Septiningsih E, Mendioro M, Tecson-Mendoza R, Ismal A, Mackill D, Heuer S. Molecular marker survey and expression analyses of the rice submergence-tolerance genes SUB1A and SUB1C. Theor Appl Genet. 2010. doi:10.1007/s00122-010-1400-z.
Suprihatno B, Coffman WR. Inheritance of submergence tolerance in rice (Oryza sativa L.). SABRAO J. 1981;13:98–102.
Toojinda T, Siangliw M, Tragoonrung S, Vanavichit A. Molecular genetics of submergence tolerance in rice: QTL analysis of key traits. Ann Bot. 2003;91:243–53.
Vergara BS, Mazaredo A. Screening for resistance to submergence under greenhouse conditions. In Proceedings International Seminar on Deepwater Rice. Dhaka, Bangladesh: Bangladesh Rice Research Institute; 1975. p. 67–70.
Xu K, Mackill DJ. A major locus for submergence tolerance mapped on rice chromosome 9. Mol Breed. 1996;2:219–24.
Xu K, Xu X, Ronald PC, Mackill DJ. A high-resolution linkage map in the vicinity of the rice submergence tolerance locus Sub1. Mol Gen Genet. 2000;263:681–9.
Xu KN, Deb R, Mackill DJ. A microsatellite marker and a codominant PCR-based marker for marker-assisted selection of submergence tolerance in rice. Crop Sci. 2004;44:248–53.