Structure of the photosynthetic reaction centre from Rhodobacter sphaeroides at 2.65 å resolution: cofactors and protein-cofactor interactions

Structure - Tập 2 Số 10 - Trang 925-936 - 1994
Ulrich Ermler1, G. Fritzsch1, Susan K. Buchanan1, Hartmut Michel1
1Max-Planck-Institut für Biophysik, Heinrich-Hoffmann-Str. 7, D-60528, Frankfurt/Main, Germany

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Okamura, 1992, Proton transfer in reaction centres from photosynthetic bacteria, Annu. Rev. Biochem, 61, 861, 10.1146/annurev.bi.61.070192.004241

Deisenhofer, 1993

Breton, 1992, The Photosynthetic Bacterial Reaction Center II, NATO-ASI Series A

Deisenhofer, 1984, X - Ray structure analysis of a membrane protein complex: electron density map at 3 å resolution and a model of the chromophores of the photosynthetic reaction center from Rhodopseudomonas viridis, J. Mol. Biol, 180, 385, 10.1016/S0022-2836(84)80011-X

Deisenhofer, 1985, Structure of the protein subunits in the photosynthetic reaction centre of Rhodopseudomonas viridis at 3 å resolution, Nature, 318, 618, 10.1038/318618a0

Deisenhofer, 1989, The photosynthetic reaction centre from the purple bacterium Rhodopseudomonas viridis, EMBO J, 8, 2149, 10.1002/j.1460-2075.1989.tb08338.x

Allen, 1986, Structural homology of reaction centres from Rhodopseudomonas sphaeroide and Rhodopseudomonas viridis as determined by X-ray diffraction, Natl. Acad. Sci. USA, 83, 8589, 10.1073/pnas.83.22.8589

Chang, 1986, Structure of Rhodopseudomonas sphaeroides R-26 reaction center, Rhodopseudomonas sphaeroides, 205, 82

Arnoux, 1989, Structure of spheroidene in the photosynthetic reaction center from Y Rhodobacter sphaeroides, FEBS Lett, 258, 47, 10.1016/0014-5793(89)81612-6

Yeates, 1988, Structure of the reaction center from Rhodobacter sphaeroides R-26 and 2.4.1: protein-cofactor (bacteriochlorophyll, bacteriopheophytin, and cartenoid) interactions, Proc. Natl. Acad. Sci. USA, 85, 7993, 10.1073/pnas.85.21.7993

Allen, 1988, Structure of the reaction center from Rhodobacter sphaeroides R-26: protein co-factor (quinones and Fe2+) interactions, Proc. Natl. Acad. Sci. USA, 85, 8487, 10.1073/pnas.85.22.8487

El-Kabbani, 1991, Comparison of reaction centres from Rhodobacter sphaeroides and Rhodopseudomonas viridis: overall architecture and protein-pigment interactions, Biochemistry, 30, 5361, 10.1021/bi00236a006

Buchanan, 1993, A new crystal form of the photosynthetic reaction centre from Rhodobacter sphaeroides of improved difraction quality, J. Mol. Biol, 230, 1311, 10.1006/jmbi.1993.1246

Michel, 1986, The ‘light’ and ‘medium’ subunits of the photosynthetic reaction centre from Rhodopseudomonas viridis: isolation of the genes, nucleotide and amino acid sequence, EMBO J, 5, 1149, 10.1002/j.1460-2075.1986.tb04340.x

Williams, 1986, Primary structure of the reaction center from Rhodopseudomonas sphaeroides, Proteins, 1, 312, 10.1002/prot.340010405

Hoff, 1988, Nomen est omen. A note on nomenclature, 98

Zinth, 1993, Time-resolved spectroscopy of the primary election transfer in reaction centers of Rhodobactersphaeroides and Rhodopseudomonas viridis, 71

Kirmaier, 1993, Electron transfer and charge recombination reactions in wild-type and mutant bacterial reaction centres, 49

Paddock, 1990, Pathway of proton transfer in bacterial reaction centres: replacement of seine-L223 by alanine inhibits electron and proton transfers associated with reduction of quinone by dihydroquinone, Proc. Natl. Acad. Sci. USA, 87, 6803, 10.1073/pnas.87.17.6803

Takahashi, 1992, Proton and electron transfer in the acceptor quinone complex of Rhodobacter sphaeroides reaction centres: characterization of site-directed mutants of the two ionizable residues, GluL212and AspL213, in the QBbinding site, Biochemistry, 31, 855, 10.1021/bi00118a031

Leibl, 1993, Evidence that serine L223 is involved in the proton transfer pathway to QB in the photosynthetic reaction center of Rhodopseudomonas viridis, Biochemistry, 32, 1958, 10.1021/bi00059a012

Matthews, 1968, Solvent content of protein crystals, J. Mol. Biol, 33, 491, 10.1016/0022-2836(68)90205-2

Allen, 1984, Crystallization of reaction center from Rhodopseudomonas sphaeroides: preliminary characterization, Proc. Natl. Acad. Sci, 81, 4795, 10.1073/pnas.81.15.4795

Chang, 1985, Characterization of bacterial photosynthetic reaction center crystals from Rhodopseudomonas sphaeroides R-26 by X-ray diffraction, J. Mol. Biol, 186, 201, 10.1016/0022-2836(85)90270-0

Ducruix, 1987, Preliminary characterization by X-ray diffraction of crystals of photochemical reaction centres from wild-type Rhodopseudomonas spheroides, J. Mol. Biol, 193, 419, 10.1016/0022-2836(87)90231-2

Allen, 1987, Structure of the reaction center from Rhodobacter sphaeroides R-26: the cofactors, Proc. Natl. Acad. Sci, 84, 5730, 10.1073/pnas.84.16.5730

Chang, 1991, Structure of the membrane-bound protein photosynthetic reaction center from Rhodobacter sphaeroides, Biochemistry, 30, 5352, 10.1021/bi00236a005

Ermler, 1994, Structure and function of the photosynthetic reaction center from Rhodobacter sphaeroides, J. Bionerg. Biomembr, 26, 5, 10.1007/BF00763216

Michel, 1986, Pigment–proteininteractions in the photosynthetic reaction centre from Rhodopseudomonas viridis, EMBO J, 5, 2445, 10.1002/j.1460-2075.1986.tb04520.x

Bylina, 1988, Influence of an amino-acid residue on the optical properties and electron transfer dynamics of a photosynthetic reaction centre complex, Nature, 336, 182, 10.1038/336182a0

Warncke, 1993, Experimental resolution of the free energies of aqueous solvation contributions to ligand–protein binding: quinone-QA site interactions in the photosynthetic reaction center protein, Proc. Natl. Acad. Sci. USA, 90, 2920, 10.1073/pnas.90.7.2920

Debus, 1986, Iron-depleted reaction centres from Rhodopseudomonas sphaeroides R-26.1: characterization and reconstitution with Fe2+, Mn2+, Co2+, Ni2+, Cu2+, and Zn2+, Biochemistry, 25, 2276, 10.1021/bi00356a064

De Groot, 1992, 13C Magic angle spinning NMR evidence for a 15, 15'-cis configuration of the spheroidene in the Rhodobacter sphaeroides photosynthetic reaction center, Biochemistry, 31, 12446, 10.1021/bi00164a021

Frank, 1988, Single crystals of the photochemical reaction center from Rhodobacter sphaeroides wild type strain 2.4.1 analyzed by polarized light, 27

Schenck, 1984, Triplet formation and triplet decay in reaction centres from the photosynthetic bacterium Rhodopseudomonas sphaeroides, Photochem. Photobiol, 39, 407, 10.1111/j.1751-1097.1984.tb08198.x

McDowell, 1991, Investigation into the source of electron transfer asymmetry in bacterial reaction centres, Biochemistry, 30, 8315, 10.1021/bi00098a006

Finkele, 1990, Role of tyrosine M210 in the initial charge separation of reaction centres of Rhodobacter sphaeroides, Biochemistry, 29, 8517, 10.1021/bi00489a002

Nagarajan, 1990, Effect of specific mutations of tyrosine-(M)210 on the primary photosynthetic electron-transfer process in Rhodobacter sphaeroides, Proc. Natl. Acad. Sci. USA, 87, 7888, 10.1073/pnas.87.20.7888

Chan, 1991, Initial electron transfer in photosynthetic reaction centres of Rhodobacter capsulatus mutants, Chem. Phys. Lett, 176, 366, 10.1016/0009-2614(91)90045-B

Coleman, 1990, Influence of mutagenic replacement of tryptophan M250 on electron transfer rates involving primary quinone in reaction centres of Rhodobacter capsulatus, 273

Stilz, 1990, Site-directed mutagenesis of threonine M222 and tryptophan M252 in the photosynthetic reaction center of Rhodobacter sphaeroides, 265

Beroza, 1992, Proton transfer pathways in the reaction center ofRhodobacter sphaeroides: a computational study, 363

Okamura, 1992, Proton transfer in bacterial reaction centres: second site mutations Asn M44→ Asn or Arg M233→ Cys restore photosynthetic competence to Asp L213→Asn mutants in RCs from Rb. sphaeroides, 349

Hanson, 1993, Site-specific and compensatory mutations imply unexpected pathways for proton delivery to the QBbinding site of the photosynthetic reaction center, Proc. Natl. Acad. Sci, 90, 8929, 10.1073/pnas.90.19.8929

Brünger, 1990, Extension of molecular replacement: a new search strategy based on Patterson correlation refinement, Acta Crystallogr A, 46, 46, 10.1107/S0108767389009633

Fitzgerald, 1988, MERLOT: an integrated package of computer programs for the determination of crystal structures by molecular replacement, J. Appl. Crystallogr, 21, 273, 10.1107/S0021889887012299

Brünger, 1987, Crystallographic R factor refinement by molecular dynamics, Science, 235, 458, 10.1126/science.235.4787.458

Jones, 1991, Improved methods for building protein models in electron density maps and the location of errors in these models, Acta Crystallogr. A, 47, 110, 10.1107/S0108767390010224

Engh, 1991, Accurate bond and angle parameters for X-ray protein structure refinement, Acta Crystallogr, 47, 392, 10.1107/S0108767391001071

Treutlein, 1992, Chromophore–protein interactions and the function of the photosynthetic reaction center: a molecular dynamics study, Proc. Natl. Acad. Sci. USA, 89, 75, 10.1073/pnas.89.1.75

Luzzati, 1952, Traitement statistique des erreurs dans la détermination des structures cristallines, Acta Crystallogr, 5, 802, 10.1107/S0365110X52002161

Kabsch, 1978, A discussion of the solution for the best rotation to relate two sets of vectors, Acta Crystallogr, 34, 827, 10.1107/S0567739478001680