Starch turnover: pathways, regulation and role in growth

Current Opinion in Plant Biology - Tập 15 Số 3 - Trang 282-292 - 2012
Mark Stitt1, Samuel C. Zeeman2
1Max Planck Institute of Molecular Plant Physiology, Am Muehlenberg 1, 14476 Potsdam-Golm, Germany
2The Institute of Agricultural Sciences, ETH Zurich, Universitätstrasse 2, CH-8092, Zurich, Switzerland

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Smith, 2007, Coordination of carbon supply and plant growth, Plant Cell Environ, 30, 1126, 10.1111/j.1365-3040.2007.01708.x

Graf, 2011, Starch and the clock: the dark side of plant productivity, Trends Plant Sci, 16, 169, 10.1016/j.tplants.2010.12.003

Gibon, 2009, Adjustment of growth, starch turnover, protein content and central metabolism to a decrease of the carbon supply when Arabidopsis is grown in very short photoperiods, Plant Cell Environ, 32, 859, 10.1111/j.1365-3040.2009.01965.x

Tschoep, 2009, Adjustment of growth and central metabolism to a mild but sustained nitrogen-limitation in Arabidopsis, Plant Cell Environ, 32, 300, 10.1111/j.1365-3040.2008.01921.x

Hummel, 2010, Arabidopsis plants acclimate to water deficit at low cost through changes of carbon usage: an integrated perspective using growth, metabolite, enzyme, and gene expression analysis, Plant Physiol, 154, 357, 10.1104/pp.110.157008

Caspar, 1985, Alterations in growth, photosynthesis, and respiration in a starchless mutant of Arabidopsis thaliana (L.) deficient in chloroplast phosphoglucomutase activity, Plant Physiol, 79, 11, 10.1104/pp.79.1.11

Lin, 1988, Isolation and characterization of a starchless mutant of Arabidopsis thaliana (L.) Heynh lacking ADPglucose pyrophosphorylase activity, Plant Physiol, 86, 1131, 10.1104/pp.86.4.1131

Stitt, 2007, Multilevel genomics analysis of carbon signalling during low carbon availability: coordinating the supply and utilisation of carbon in a fluctuating environment, Funct Plant Biol, 34, 526, 10.1071/FP06249

Graf, 2010, Circadian control of carbohydrate availability for growth in Arabidopsis plants at night, Proc Natl Acad Sci U S A, 107, 9458, 10.1073/pnas.0914299107

Yazdanbakhsh, 2011, Circadian control of root elongation and C partitioning in Arabidopsis thaliana, Plant Cell Environ, 34, 877, 10.1111/j.1365-3040.2011.02286.x

Pantin, 2011, Control of leaf expansion: a developmental switch from metabolics to hydraulics, Plant Physiol, 156, 803, 10.1104/pp.111.176289

Rasse, 2006, Leaf carbohydrate controls over Arabidopsis growth and response to elevated CO2: an experimentally based model, New Phytol, 172, 500, 10.1111/j.1469-8137.2006.01848.x

Weise, 2012, Engineering starch accumulation by manipulation of phosphate metabolism of starch, Plant Biotech J, 7, 139

Poorter, 2000, The role of biomass allocation in the growth response of plants to different levels of light, CO2, nutrients and water: a quantitative review, Aust J Plant Physiol, 27, 1191, 10.1071/PP99173_CO

Zeeman, 2010, Starch: its metabolism, evolution, and biotechnological modification in plants, Annu Rev Plant Biol, 61, 209, 10.1146/annurev-arplant-042809-112301

Tsai, 2009, Starch synthesis in Arabidopsis is achieved by spatial cotranscription of core starch metabolism genes, Plant Physiol, 151, 1582, 10.1104/pp.109.144196

Hanson, 1988, A starchless mutant of Nicotiana sylvestris containing a modified plastid phosphoglucomutase, Plant Physiol, 88, 838, 10.1104/pp.88.3.838

Harrison, 1998, Evidence that the rug3 locus of pea (Pisum sativum L.) encodes plastidial phosphoglucomutase confirms that the imported substrate for starch synthesis in pea amyloplasts is glucose-6-phosphate, Plant J, 13, 753, 10.1046/j.1365-313X.1998.00077.x

Vriet, 2010, A suite of Lotus japonicus starch mutants reveals both conserved and novel features of starch metabolism, Plant Physiol, 154, 643, 10.1104/pp.110.161844

Lytovchenko, 2002, Carbon assimilation and metabolism in potato leaves deficient in plastidial phosphoglucomutase, Planta, 215, 802, 10.1007/s00425-002-0810-9

Szydlowski, 2009, Starch granule initiation in Arabidopsis requires the presence of either Class IV or Class III starch synthases, Plant Cell, 21, 2443, 10.1105/tpc.109.066522

Crumpton-Taylor, 2012, Control of starch granule numbers in Arabidopsis chloroplasts, Plant Physiol, 158, 905, 10.1104/pp.111.186957

Vitha, 2000, Interaction of root gravitropism and phototropism in Arabidopsis wild-type and starchless mutants, Plant Physiol, 122, 453, 10.1104/pp.122.2.453

Streb, 2009, The debate on the pathway of starch synthesis: a closer look at low-starch mutants lacking plastidial phosphoglucomutase supports the chloroplast-localized pathway, Plant Physiol, 151, 1769, 10.1104/pp.109.144931

Munoz, 2005, Sucrose synthase controls both intracellular ADP glucose levels and transitory starch biosynthesis in source leaves, Plant Cell Physiol, 46, 1366, 10.1093/pcp/pci148

Barratt, 2009, Normal growth of Arabidopsis requires cytosolic invertase but not sucrose synthase, Proc Natl Acad Sci U S A, 106, 13124, 10.1073/pnas.0900689106

Fettke, 2011, Glucose-1-phosphate transport into protoplasts and chloroplasts from leaves of Arabidopsis, Plant Physiol, 155, 1723, 10.1104/pp.110.168716

Ventriglia, 2008, Two Arabidopsis ADP-glucose pyrophosphorylase large subunits (APL1 and APL2) are catalytic, Plant Physiol, 148, 65, 10.1104/pp.108.122846

Edner, 2007, Glucan, water dikinase activity stimulates breakdown of starch granules by plastidial β-amylases, Plant Physiol, 145, 17, 10.1104/pp.107.104224

Hizukuri, 1983, Phosphorus and amylose branching in rice starch granules, Starch-Stärke, 35, 348, 10.1002/star.19830351004

Kötting, 2009, STARCH-EXCESS4 is a laforin-like phosphoglucan phosphatase required for starch degradation in Arabidopsis thaliana, Plant Cell, 21, 334, 10.1105/tpc.108.064360

Hejazi, 2010, The laforin-like dual-specificity phosphatase SEX4 from Arabidopsis hydrolyzes both C6- and C3-phosphate esters introduced by starch-related dikinases and thereby affects phase transition of α-glucans, Plant Physiol, 152, 711, 10.1104/pp.109.149914

Santelia, 2011, The phosphoglucan phosphatase Like Sex Four2 dephosphorylates starch at the C3-position in Arabidopsis, Plant Cell, 23, 4096, 10.1105/tpc.111.092155

Comparot-Moss, 2010, A putative phosphatase, LSF1, is required for normal starch turnover in Arabidopsis leaves, Plant Physiol, 152, 685, 10.1104/pp.109.148981

Fulton, 2008, Beta-AMYLASE4, a noncatalytic protein required for starch breakdown, acts upstream of three active beta-amylases in Arabidopsis chloroplasts, Plant Cell, 20, 1040, 10.1105/tpc.107.056507

Kötting, 2010, Regulation of starch metabolism: the age of enlightenment?, Curr Opin Plant Biol, 13, 321, 10.1016/j.pbi.2010.01.003

Stitt, 2010, Arabidopsis and primary photosynthetic metabolism—more than the icing on the cake, Plant J, 61, 1067, 10.1111/j.1365-313X.2010.04142.x

MacRae, 2006, Control of sucrose biosynthesis, 234

Hädrich, 2011, Use of TILLING and robotised enzyme assays to generate an allelic series of Arabidopsis thaliana mutants with altered ADP-glucose pyrophosphorylase activity, J Plant Physiol, 168, 1395, 10.1016/j.jplph.2011.01.013

Michalska, 2009, NTRC links built-in thioredoxin to light and sucrose in regulating starch synthesis in chloroplasts and amyloplasts, Proc Natl Acad Sci U S A, 106, 9908, 10.1073/pnas.0903559106

Kolbe, 2005, Trehalose 6-phosphate regulates starch synthesis via posttranslational redox activation of ADP-glucose pyrophosphorylase, Proc Natl Acad Sci U S A, 102, 11118, 10.1073/pnas.0503410102

Smeekens, 2010, Sugar signals and molecular networks controlling plant growth, Curr Opin Plant Biol, 13, 274, 10.1016/j.pbi.2009.12.002

Hädrich, 2012, Mutagenesis of cysteine81 prevents dimerization of the APS1 subunit of ADP-glucose pyrophosphorylase and alters diurnal starch turnover in Arabidopsis thaliana leaves, Plant J, 70, 231, 10.1111/j.1365-313X.2011.04860.x

Harmer, 2000, Orchestrated transcription of key pathways in Arabidopsis by the circadian clock, Science, 290, 2110, 10.1126/science.290.5499.2110

Smith, 2004, Diurnal changes in the transcriptome encoding enzymes of starch metabolism provide evidence for both transcriptional and post-transcriptional regulation of starch metabolism in Arabidopsis leaves, Plant Physiol, 136, 2687, 10.1104/pp.104.044347

Lu, 2005, Daylength and circadian effects on starch degradation and maltose metabolism, Plant Physiol, 138, 2280, 10.1104/pp.105.061903

Usadel, 2008, Global transcript levels respond to small changes of the carbon status during progressive exhaustion of carbohydrates in Arabidopsis rosettes, Plant Physiol, 146, 1834, 10.1104/pp.107.115592

McBride, 2009, The glycogen-binding domain on the AMPK beta subunit allows the kinase to act as a glycogen sensor, Cell Metab, 9, 23, 10.1016/j.cmet.2008.11.008

Gibon, 2006, Integration of metabolite with transcript and enzyme activity profiling during diurnal cycles in Arabidopsis rosettes, Genome Biol, 7, R76, 10.1186/gb-2006-7-8-r76

Piques, 2009, Ribosome and transcript copy numbers, polysome occupancy and enzyme dynamics in Arabidopsis, Mol Systems Biol, 5, 314, 10.1038/msb.2009.68

Reinhold, 2011, β-Amylase-like proteins function as transcription factors in Arabidopsis, controlling shoot growth and development, Plant Cell, 23, 1391, 10.1105/tpc.110.081950

Nozue, 2007, Rhythmic growth explained by coincidence between internal and external cues, Nature, 448, 358, 10.1038/nature05946

Nozue, 2006, Diurnal regulation of plant growth, Plant Cell Environ, 29, 396, 10.1111/j.1365-3040.2005.01489.x

Wiese, 2007, Spatio-temporal leaf growth patterns of Arabidopsis thaliana and evidence for sugar control of the diel leaf growth cycle, New Phytol, 174, 752, 10.1111/j.1469-8137.2007.02053.x

Poire, 2010, Diel time-courses of leaf growth in monocot and dicot species: endogenous rhythms and temperature effects, J Exp Bot, 61, 1751, 10.1093/jxb/erq049

Dixon, 2011, Temporal repression of core circadian genes is mediated through EARLY FLOWERING 3 in Arabidopsis, Curr Biol, 21, 120, 10.1016/j.cub.2010.12.013

Helfer, 2011, LUX ARRHYTHMO encodes a nighttime repressor of circadian gene expression in the Arabidopsis core clock, Curr Biol, 21, 126, 10.1016/j.cub.2010.12.021

Nusinow, 2011, The ELF4-ELF3-LUX complex links the circadian clock to diurnal control of hypocotyl growth, Nature, 475, 398, 10.1038/nature10182

Pokhilko, 2010, Data assimilation constrains new connections and components in a complex, eukaryotic circadian clock model, Mol Syst Biol, 6, 416, 10.1038/msb.2010.69

De Veylder, 2007, The ins and outs of the plant cell cycle, Nat Rev Mol Cell Biol, 8, 655, 10.1038/nrm2227

Henriques, 2010, Arabidopsis S6 kinase mutants display chromosome instability and altered RBR1-E2F pathway activity, EMBO J, 29, 2979, 10.1038/emboj.2010.164

Sulpice, 2010, Network analysis of enzyme activities and metabolite levels and their relationship to biomass in a large panel of arabidopsis accessions, Plant Cell, 22, 2872, 10.1105/tpc.110.076653

Sulpice, 2009, Starch as a major integrator in the regulation of plant growth, Proc Natl Acad Sci U S A, 106, 10348, 10.1073/pnas.0903478106

Ni, 2009, Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids, Nature, 457, 327, 10.1038/nature07523

McDowell, 2011, The interdependence of mechanisms underlying climate-driven vegetation mortality, Trends Ecol Evol, 26, 523, 10.1016/j.tree.2011.06.003

Hoffman, 2010, Changes in diurnal patterns within the Populus transcriptome and metabolome in response to photoperiod variation, Plant Cell Environ, 33, 1298, 10.1111/j.1365-3040.2010.02148.x

Resman, 2010, Components acting downstream of short day perception regulate differential cessation of cambial activity and associated responses in early and late clones of hybrid poplar, Plant Physiol, 154, 1294, 10.1104/pp.110.163907

Berrocal-Lobo, 2011, Identification of a homolog of Arabidopsis DSP4 (SEX4) in chestnut: its induction and accumulation in stem amyloplasts during winter or in response to the cold, Plant Cell Environ, 34, 1693, 10.1111/j.1365-3040.2011.02365.x

Bass, 2010, Circadian integration of metabolism and energetics, Science, 330, 1349, 10.1126/science.1195027