Spatial organization of intracellular Ca2+ signals

Kholodenko, 2006, Cell-signalling dynamics in time and space, Nat Rev Mol Cell Biol, 7, 165, 10.1038/nrm1838 Good, 2011, Scaffold proteins: hubs for controlling the flow of cellular information, Science, 332, 680, 10.1126/science.1198701 Taylor, 2010, IP3 receptors: toward understanding their activation, Cold Spring Harb Perspect Biol, 2, a004010, 10.1101/cshperspect.a004010 Celio, 1996 St Johnston, 2005, Moving messages: the intracellular localization of mRNAs, Nat Rev Mol Cell Biol, 6, 363, 10.1038/nrm1643 Dalbey, 2007 Pantazaka, 2011, Differential distribution, clustering and lateral diffusion of subtypes of inositol 1,4,5-trisphosphate receptor, J Biol Chem, 286, 23378, 10.1074/jbc.M111.236372 Taylor, 2009, Ca2+ channels on the move, Biochemistry, 48, 12062, 10.1021/bi901739t Berridge, 2003, Calcium signalling: dynamics, homeostasis and remodelling, Nat Rev Mol Cell Biol, 4, 517, 10.1038/nrm1155 Waite, 1985, Approaches to the study of mammalian cellular phospholipases, J Lipid Res, 26, 1379, 10.1016/S0022-2275(20)34243-7 Kirichok, 2004, The mitochondrial calcium uniporter is a highly selective ion channel, Nature, 427, 360, 10.1038/nature02246 Hille, 2001 Lytton, 1992, Functional comparisons between isoforms of the sarcoplasmic or endoplasmic reticulum family of calcium pumps, J Biol Chem, 267, 14483, 10.1016/S0021-9258(19)49738-X Houslay, 2009, Underpinning compartmentalised cAMP signalling through targeted cAMP breakdown, Trends Biochem Sci, 35, 91, 10.1016/j.tibs.2009.09.007 Neher, 1998, Usefulness and limitations of linear approximations to the understanding of Ca++ signals, Cell Calcium, 24, 345, 10.1016/S0143-4160(98)90058-6 Allbritton, 1992, Range of messenger action of calcium ion and inositol 1,4,5-trisphosphate, Science, 258, 1812, 10.1126/science.1465619 Chen, 1999, Cyclic AMP diffusion coefficient in frog olfactory cilia, Biophys J, 76, 2861, 10.1016/S0006-3495(99)77440-0 Catterall, 2011, Voltage-gated calcium channels, Cold Spring Harb Perspect Biol, 3, a003947, 10.1101/cshperspect.a003947 Foskett, 2007, Inositol trisphosphate receptor Ca2+ release channels, Physiol Rev, 87, 593, 10.1152/physrev.00035.2006 Sitsapesan, 1998 DeMaria, 2001, Calmodulin bufurcates the local Ca2+ signal that modulates P/Q-type Ca2+ channels, Nature, 411, 484, 10.1038/35078091 Dick, 2008, A modular switch for spatial Ca2+ selectivity in the calmodulin regulation of Cav channels, Nature, 451, 830, 10.1038/nature06529 Tadross, 2008, Mechanism of local and global Ca2+ sensing by calmodulin in complex with a Ca2+ channel, Cell, 133, 1228, 10.1016/j.cell.2008.05.025 Adkins, 1999, Lateral inhibition of inositol 1,4,5-trisphosphate receptors by cytosolic Ca2+, Curr Biol, 9, 1115, 10.1016/S0960-9822(99)80481-3 Wang, 2000, Coincidence detection in single dendritic spines mediated by calcium release, Nat Neurosci, 3, 1266, 10.1038/81792 Berridge, 1993, A tale of two messengers, Nature, 365, 388, 10.1038/365388a0 Marchant, 1999, Initiation of IP3-mediated Ca2+ waves in Xenopus oocytes, EMBO J, 18, 5285, 10.1093/emboj/18.19.5285 Patel, 2010, Two-pore channels: regulation by NAADP and customized roles in triggering calcium signals, Cell Calcium, 47, 480, 10.1016/j.ceca.2010.05.001 Lee, 1995, A derivative of NADP mobilizes calcium stores insensitive to inositol trisphosphate and cyclic ADP-ribose, J Biol Chem, 270, 2152, 10.1074/jbc.270.5.2152 Churchill, 2002, NAADP mobilizes Ca2+ from reserve granules, lysosome-related organelles, in sea urchin eggs, Cell, 111, 703, 10.1016/S0092-8674(02)01082-6 Zhu, 2010, Calcium signaling via two-pore channels: local or global, that is the question, Am J Physiol, 298, C430, 10.1152/ajpcell.00475.2009 Brailoiu, 2009, Essential requirement for two-pore channel 1 in NAADP-mediated calcium signaling, J Cell Biol, 186, 201, 10.1083/jcb.200904073 Calcraft, 2009, NAADP mobilizes calcium from acidic organelles through two-pore channels, Nature, 459, 596, 10.1038/nature08030 Zong, 2009, The two-pore channel TPCN2 mediates NAADP-dependent Ca2+-release from lysosomal stores, Pflüg Arch, 458, 891, 10.1007/s00424-009-0690-y Brailoiu, 2010, An NAADP-gated two-pore channel targeted to the plasma membrane uncouples triggering from amplifying Ca2+ signals, J Biol Chem, 285, 38611, 10.1074/jbc.M110.162073 Pitt, 2010, TPC2 is a novel NAADP-sensitive Ca2+-release channel, operating as a dual sensor of luminal pH and Ca2+, J Biol Chem, 285, 35039, 10.1074/jbc.M110.156927 Schieder, 2010, Characterization of two pore channel 2 (TPCN2)-mediated Ca2+ currents in isolated lysosomes, J Biol Chem, 285, 21219, 10.1074/jbc.C110.143123 Soares, 2007, NAADP as a second messenger: neither CD38 nor base-exchange reaction are necessary for in vivo generation of NAADP in myometrial cells, Am J Physiol, 292, C227, 10.1152/ajpcell.00638.2005 Ruas, 2010, Purified TPC isoforms form NAADP receptors with distinct roles for Ca2+ signaling and endolysosomal trafficking, Curr Biol, 20, 703, 10.1016/j.cub.2010.02.049 Kinnear, 2008, Lysosomes co-localize with ryanodine receptor subtype 3 to form a trigger zone for calcium signalling by NAADP in rat pulmonary arterial smooth muscle, Cell Calcium, 44, 190, 10.1016/j.ceca.2007.11.003 Gerasimenko, 2003, NAADP mobilizes Ca2+ from a thapsigargin-sensitive store in the nuclear envelope by activating ryanodine receptors, J Cell Biol, 163, 271, 10.1083/jcb.200306134 Dammermann, 2009, NAADP-mediated Ca2+ signaling via type 1 ryanodine receptor in T cells revealed by a synthetic NAADP antagonist, Proc Natl Acad Sci USA, 106, 10678, 10.1073/pnas.0809997106 Chini, 1996, Nicotinate-adenine dinucleotide phosphate-induced Ca2+-release does not behave as a Ca2+-induced Ca2+-release system, Biochem J, 316, 709, 10.1042/bj3160709 Cancela, 1999, Coordination of agonist-induced Ca2+ signalling patterns by NAADP in pancreatic acinar cells, Nature, 398, 74, 10.1038/18032 Churchill, 2001, NAADP induces Ca2+ oscillations via a two-pool mechanism by priming IP3- and cADPR-sensitive Ca2+ stores, EMBO J, 20, 2666, 10.1093/emboj/20.11.2666 Luzio, 2007, Lysosomes: fusion and function, Nat Rev Mol Cell Biol, 8, 622, 10.1038/nrm2217 Parker, 1996, Elementary events of InsP3-induced Ca2+ liberation in Xenopus oocytes: hot spots, puffs and blips, Cell Calcium, 20, 105, 10.1016/S0143-4160(96)90100-1 Bootman, 1997, Cooking with calcium: the recipes for composing global signals from elementary events, Cell, 91, 367, 10.1016/S0092-8674(00)80420-1 Smith, 2009, Imaging the quantal substructure of single IP3R channel activity during Ca2+ puffs in intact mammalian cells, Proc Natl Acad Sci USA, 106, 6404, 10.1073/pnas.0810799106 Smith, 2009, Ca2+ puffs originate from preestablished stable clusters of inositol trisphosphate receptors, Sci Signal, 2, ra77, 10.1126/scisignal.2000466 Rahman, 2009, Clustering of IP3 receptors by IP3 retunes their regulation by IP3 and Ca2+, Nature, 458, 655, 10.1038/nature07763 Rahman, 2009, Dynamic regulation of IP3 receptor clustering and activity by IP3, Channels, 3, 226, 10.4161/chan.3.4.9247 Rahman, 2010, Nuclear patch-clamp recording from inositol 1,4,5-trisphosphate receptors, 199 Taylor, 2009, Targeting and clustering of IP3 receptors: key determinants of spatially organized Ca2+ signals, Chaos, 19, 037102-1, 10.1063/1.3127593 Parker, 2010, Recording single-channel activity of inositol trisphosphate receptors in intact cells with a microscope, not a patch clamp, J Gen Physiol, 136, 119, 10.1085/jgp.200910390 Higo, 2005, Subtype-specific and ER lumenal environment-dependent regulation of inositol 1,4,5-trisphosphate receptor type 1 by ERp44, Cell, 120, 85, 10.1016/j.cell.2004.11.048 Worley, 2007, Homer proteins in Ca2+ signaling by excitable and non-excitable cells, Cell Calcium, 42, 363, 10.1016/j.ceca.2007.05.007 Sala, 2001, Regulation of dendritic spine morphology and synaptic function by shank and homer, Neuron, 31, 115, 10.1016/S0896-6273(01)00339-7 Kammermeier, 2006, Surface clustering of metabotropic glutamate receptor 1 induced by long Homer proteins, BMC Neurosci, 7, 1, 10.1186/1471-2202-7-1 Hwang, 2005, The interaction of phospholipase C-β3 with Shank2 regulates mGluR-mediated calcium signal, J Biol Chem, 280, 12467, 10.1074/jbc.M410740200 Tu, 1998, Homer binds a novel proline-rich motif and links group 1 metabotropic glutamate receptors with IP3 receptors, Neuron, 21, 717, 10.1016/S0896-6273(00)80589-9 Abe, 2003, Effects of coexpression with Homer isoforms on the function of metabotropic glutamate receptor 1α, Mol Cell Neurosci, 23, 157, 10.1016/S1044-7431(03)00052-6 Roche, 1999, Homer 1b regulates the trafficking of group I metabotropic glutamate receptors, J Biol Chem, 274, 25953, 10.1074/jbc.274.36.25953 Kim, 2004, PDZ domain proteins of synapses, Nat Rev Neurosci, 5, 771, 10.1038/nrn1517 Sala, 2005, Key role of the postsynaptic density scaffold proteins Shank and Homer in the functional architecture of Ca2+ homeostasis at dendritic spines in hippocampal neurons, J Neurosci, 25, 4587, 10.1523/JNEUROSCI.4822-04.2005 Brakeman, 1997, Homer: a protein that selectively binds metabotropic glutamate receptors, Nature, 386, 284, 10.1038/386284a0 Mizutani, 2008, Phosphorylation of Homer3 by calcium/calmodulin-dependent kinase II regulates a coupling state of its target molecules in Purkinje cells, J Neurosci, 28, 5369, 10.1523/JNEUROSCI.4738-07.2008 Tovey, 2008, Selective coupling of type 6 adenylyl cyclase with type 2 IP3 receptors mediates a direct sensitization of IP3 receptors by cAMP, J Cell Biol, 183, 297, 10.1083/jcb.200803172 Tovey, 2010, Regulation of inositol 1,4,5-trisphosphate receptors by cAMP independent of cAMP-dependent protein kinase, J Biol Chem, 285, 12979, 10.1074/jbc.M109.096016 Wong, 2004, AKAP signalling complexes: focal points in space and time, Nat Rev Mol Cell Biol, 5, 959, 10.1038/nrm1527 Dai, 2009, Supramolecular assemblies and localized regulation of voltage-gated ion channels, Physiol Rev, 89, 411, 10.1152/physrev.00029.2007 Hell, 2010, Beta-adrenergic regulation of the L-type Ca2+ channel CaV1.2 by PKA rekindles excitement, Sci Signal, 3, pe33, 10.1126/scisignal.3141pe33 Putney, 1986, A model for receptor-regulated calcium entry, Cell Calcium, 7, 1, 10.1016/0143-4160(86)90026-6 Putney, 2009, Capacitative calcium entry: from concept to molecules, Immunol Rev, 231, 10, 10.1111/j.1600-065X.2009.00810.x Zweifach, 1995, Rapid inactivation of depletion-activated calcium current (ICRAC) due to local calcium feedback, J Gen Physiol, 105, 209, 10.1085/jgp.105.2.209 Prakriya, 2006, Regulation of CRAC channel activity by recruitment of silent channels to a high open-probability gating mode, J Gen Physiol, 128, 373, 10.1085/jgp.200609588 Parekh, 2005, Store-operated calcium channels, Physiol Rev, 85, 757, 10.1152/physrev.00057.2003 Lewis, 2007, The molecular choreography of a store-operated calcium channel, Nature, 446, 284, 10.1038/nature05637 Zhou, 2010, STIM1 gates the store-operated calcium channel ORAI1 in vitro, Nat Struct Mol Biol, 17, 112, 10.1038/nsmb.1724 Prakriya, 2006, Orai1 is an essential pore subunit of the CRAC channel, Nature, 443, 230, 10.1038/nature05122 Yeromin, 2006, Molecular identification of the CRAC channel by altered ion selectivity in a mutant of Orai, Nature, 443, 226, 10.1038/nature05108 Zhou, 2010, Pore architecture of the ORAI1 store-operated calcium channel, Proc Natl Acad Sci USA, 107, 4896, 10.1073/pnas.1001169107 Penna, 2008, The CRAC channel consists of a tetramer formed by Stim-induced dimerization of Orai dimers, Nature, 456, 116, 10.1038/nature07338 Park, 2009, STIM1 clusters and activates CRAC channels via direct binding of a cytosolic domain to Orai1, Cell, 136, 876, 10.1016/j.cell.2009.02.014 Liou, 2005, STIM is a Ca2+ sensor essential for Ca2+-store-depletion-triggered Ca2+ influx, Curr Biol, 15, 1235, 10.1016/j.cub.2005.05.055 Stathopulos, 2008, Structural and mechanistic insights into STIM1-mediated initiation of store-operated calcium entry, Cell, 135, 110, 10.1016/j.cell.2008.08.006 Carrasco, 2011, STIM proteins and the endoplasmic reticulum–plasma membrane junctions, Annu Rev Biochem, 80, 973, 10.1146/annurev-biochem-061609-165311 Treves, 2004, Junctate is a key element in calcium entry induced by activation of InsP3 receptors and/or calcium store depletion, J Cell Biol, 166, 537, 10.1083/jcb.200404079 Korzeniowski, 2010, Activation of STIM1–Orai1 involves an intramolecular switching mechanism, Sci Signal, 3, ra82, 10.1126/scisignal.2001122 Srikanth, 2010, A novel EF-hand protein, CRACR2A, is a cytosolic Ca2+ sensor that stabilizes CRAC channels in T cells, Nat Cell Biol, 12, 436, 10.1038/ncb2045 Luik, 2008, Oligomerization of STIM1 couples ER calcium depletion to CRAC channel activation, Nature, 454, 538, 10.1038/nature07065 Feske, 2006, A mutation in Orai1 causes immune deficiency by abrogating CRAC channel function, Nature, 441, 179, 10.1038/nature04702 Picard, 2009, STIM1 mutation associated with a syndrome of immunodeficiency and autoimmunity, N Eng J Med, 360, 1971, 10.1056/NEJMoa0900082 Zeng, 2008, STIM1 gates TRPC channels, but not Orai1, by electrostatic interaction, Mol Cell, 32, 439, 10.1016/j.molcel.2008.09.020 Cheng, 2011, Local Ca2+ entry via Orai1 regulates plasma membrane recruitment of TRPC1 and controls cytosolic Ca2+ signals required for specific cell functions, PLoS Biol, 9, e1001025, 10.1371/journal.pbio.1001025 Bolotina, 2008, Orai, STIM1 and iPLA2β: a view from a different perspective, J Physiol, 586, 3035, 10.1113/jphysiol.2008.154997 Bird, 2009, STIM1 is a calcium sensor specialized for digital signaling, Curr Biol, 19, 1, 10.1016/j.cub.2009.08.022 Mullins, 2009, STIM1 and calmodulin interact with Orai1 to induce Ca2+-dependent inactivation of CRAC channels, Proc Natl Acad Sci USA, 106, 15495, 10.1073/pnas.0906781106 Willoughby, 2007, Organization and Ca2+ regulation of adenylyl cyclases in cAMP microdomains, Physiol Rev, 87, 965, 10.1152/physrev.00049.2006 Lin, 2000, Sustained endothelial nitric-oxide synthase activation requires capacitative Ca2+ entry, J Biol Chem, 275, 17979, 10.1074/jbc.275.24.17979 Chang, 2008, Local Ca2+ influx through Ca2+ release-activated Ca2+ (CRAC) channels stimulates production of an intracellular messenger and an intercellular pro-inflammatory signal, J Biol Chem, 283, 4622, 10.1074/jbc.M705002200 Kar, 2011, Selective activation of the transcription factor NFAT1 by calcium microdomains near Ca2+ release-activated Ca2+ (CRAC) channels, J Biol Chem, 286, 14795, 10.1074/jbc.M111.220582 Di Capite, 2009, Decoding of cytoplasmic Ca2+ oscillations through the spatial signature drives gene expression, Curr Biol, 19, 853, 10.1016/j.cub.2009.03.063 Zweifach, 1995, Slow calcium-dependent inactivation of depletion-activated calcium current. Store-dependent and -independent mechanisms, J Biol Chem, 270, 14445, 10.1074/jbc.270.24.14445 Korzeniowski, 2009, Store-operated Ca2+ influx and subplasmalemmal mitochondria, Cell Calcium, 46, 49, 10.1016/j.ceca.2009.04.002 Montalvo, 2006, ATP from subplasmalemmal mitochondria controls Ca2+-dependent inactivation of CRAC channels, J Biol Chem, 281, 35616, 10.1074/jbc.M603518200 Hoth, 1997, Mitochondrial regulation of store-operated calcium signaling in T lymphocytes, J Cell Biol, 137, 633, 10.1083/jcb.137.3.633 Jousset, 2007, STIM1 knockdown reveals that store-operated Ca2+ channels located close to sarco/endoplasmic Ca2+ ATPases (SERCA) pumps silently refill the endoplasmic reticulum, J Biol Chem, 282, 11456, 10.1074/jbc.M609551200 Berridge, 2000, The versatility and universality of calcium signalling, Nat Rev Mol Cell Biol, 1, 11, 10.1038/35036035