Single nucleotide polymorphisms detection based on DNA microarray technology: HLA as a model

Autoimmunity Reviews - Tập 4 - Trang 510-514 - 2005
Giulio Lelio Palmisano1, Laura Delfino2, Monica Fiore1, Anna Longo1, Giovanni Battista Ferrara1
1Department of Biology, University of Genoa, Genoa, Italy
2National Cancer Research Institute (IST), Genoa, Italy

Tài liệu tham khảo

Adams, 2001, Practicality of high-throughput HLA sequencing based typing, ASHI Q, 25, 54 Vos, 1995, AFLP: a new technique for DNA fingerprinting, Nucleic Acids Res, 23, 4407, 10.1093/nar/23.21.4407 Jeffreys, 1985, Hypervariable ‘minisatellite’ regions in human DNA, Nature, 314, 67, 10.1038/314067a0 Jenkins, 2002, High throughput SNP genotyping, Comp Funct Genomics, 3, 57, 10.1002/cfg.130 Tsuchihashi, 2002, Progress in high throughput SNP genotyping methods, Pharmacogenomics J, 2, 103, 10.1038/sj.tpj.6500094 Hacia, 1999, Determination of ancestral alleles for human single nucleotide polymorphisms using high-density oligonucleotide arrays, Nat Genet, 22, 164, 10.1038/9674 Miller, 1988, A simple salting out procedure for extracting DNA from human nucleated cells, Nucleic Acid Res, 16, 1215, 10.1093/nar/16.3.1215 Sachidanandam, 2001, A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms, Nature, 409, 928, 10.1038/35057149 Larsen, 2004, The genetics of HLA-associated disease, Curr Opin Immunol, 16, 660, 10.1016/j.coi.2004.07.014 Stadler, 2005, Single nucleotide polymorphisms as a prerequisite for autoantigens, Eur J Immunol, 35, 371, 10.1002/eji.200425481 Eisenbarth, 2003, Immunogenetics/immunopathogenesis of type 1A diabetes, Ann N Y Acad Sci, 1005, 109, 10.1196/annals.1288.012 Guo, 1999, Oligonucleotide arrays for high resolution HLA typing, Rev Immunogenet, 1, 220 Guo, 2002, Oligonucleotide arrays for high-throughput SNPs detection in the MHC class I genes: HLA-B as a model system, Genome Res, 12, 447, 10.1101/gr.206402. Article published online before print in February 2002 Consolandi, 2004, Polymorphism analysis within the HLA-A locus by universal oligonucleotide array, Hum Mutat, 24, 428, 10.1002/humu.20098 Ferrara, 2005, A fuzzy approach to image analysis in HLA Typing using oligonucleotide microarrays. Fuzzy sets and systems, Fuzzy sets syst, 152, 37, 10.1016/j.fss.2004.10.013