Single-cell RNA sequencing of meiocytes and microspores reveals the involvement of the Rf4 gene in redox homeostasis of CMS-C maize
Tài liệu tham khảo
E.M. East, Heterosis, Genetics 21 (1936) 375–397.
Fu, 2014, Utilization of crop heterosis: a review, Euphytica, 197, 161, 10.1007/s10681-014-1103-7
Van Der Kley, 1954, Male sterility and its importance in breeding heterosis varieties, Euphytica, 3, 117, 10.1007/BF00029958
Bohra, 2016, Cytoplasmic male sterility (CMS) in hybrid breeding in field crops, Plant Cell Rep., 35, 967, 10.1007/s00299-016-1949-3
Chen, 2014, Male sterility and fertility restoration in crops, Annu. Rev. Plant Biol., 65, 579, 10.1146/annurev-arplant-050213-040119
Kim, 2018, Molecular control of male fertility for crop hybrid breeding, Trends Plant Sci., 23, 53, 10.1016/j.tplants.2017.10.001
Z. Wang, Y. Zou, X. Li, Q. Zhang, L. Chen, H. Wu, D. Su, Y. Chen, J. Guo, D. Luo, Y. Long, Y. Zhong, Y. Liu, Cytoplasmic male sterility of rice with Boro II cytoplasm is caused by a cytotoxic peptide and is restored by two related PPR motif genes via distinct modes of mRNA silencing, Plant Cell 18 (2006) 676–687.
J. Hu, K. Wang, W. Huang, G. Liu, Y. Gao, J. Wang, Q. Huang, Y. Ji, X. Qin, L. Wan, R. Zhu, S. Li, D. Yang, Y. Zhu, The rice pentatricopeptide repeat protein RF5 restores fertility in Hong-Lian cytoplasmic male-sterile lines via a complex with the glycine-rich protein GRP162, Plant Cell 24 (2012) 109–122.
Luo, 2013, A detrimental mitochondrial-nuclear interaction causes cytoplasmic male sterility in rice, Nat. Genet., 45, 573, 10.1038/ng.2570
Cui, 1996, The rf2 nuclear restorer gene of male-sterile T-cytoplasm maize, Science, 272, 1334, 10.1126/science.272.5266.1334
He, 1995, Pollen fertility restoration by nuclear gene Fr in CMS bean: nuclear-directed alteration of a mitochondrial population, Genetics, 139, 955, 10.1093/genetics/139.2.955
Zeng, 2017, Redox regulation of plant stem cell fate, EMBO J., 36, 2844, 10.15252/embj.201695955
O. Van Aken, Mitochondrial redox systems as central hubs in plant metabolism and signaling, Plant Physiol. 186 (2021) 36–52.
Beckett, 1971, Classification of male-sterile cytoplasms in maize (Zea mays L.), Crop Sci., 11, 724, 10.2135/cropsci1971.0011183X001100050037xa
Koncz, 1980, Key for classification of cytoplasmic male sterile types in maize, Plant Sci. Lett., 17, 317, 10.1016/0304-4211(80)90163-7
Dewey, 1986, Novel recombinations in the maize mitochondrial genome produce a unique transcriptional unit in the Texas male-sterile cytoplasm, Cell, 44, 439, 10.1016/0092-8674(86)90465-4
Wen, 1999, Mitochondrial gene expression in developing male gametophytes of male-fertile and S male-sterile maize, Sex. Plant Reprod., 11, 323, 10.1007/s004970050159
H. Xiao, F. Zhang, Y. Zheng, The 5' stem-loop and its role in mRNA stability in maize S cytoplasmic male sterility, Plant J. 47 (2006) 864–872.
Xiao, 2020, Activation of mitochondrial orf355 gene expression by a nuclear-encoded DREB transcription factor causes cytoplasmic male sterility in maize, Mol. Plant, 13, 1270, 10.1016/j.molp.2020.07.002
Dewey, 1991, Chimeric mitochondrial genes expressed in the C male-sterile cytoplasm of maize, Curr. Genet., 20, 475, 10.1007/BF00334775
Tang, 2001, The SSR markers of the main restorer genes for CMS-C cytoplasmic male sterility in maize, Sci. Agric. Sin., 34, 592
Jaqueth, 2020, Fertility restoration of maize CMS-C altered by a single amino acid substitution within the Rf4 bHLH transcription factor, Plant J., 101, 101, 10.1111/tpj.14521
Nan, 2017, MS23, a master basic helix-loop-helix factor, regulates the specification and development of the tapetum in maize, Development, 144, 163
Liu, 2018, Comparative transcriptome analysis reveals that tricarboxylic acid cycle-related genes are associated with maize CMS-C fertility restoration, BMC Plant Biol., 18, 190, 10.1186/s12870-018-1409-z
Xue, 2019, Comparative transcriptome analysis among the three line of cytoplasmic male sterility in maize, Sci. Agric. Sin., 52, 1308
Cao, 2019, Comprehensive single-cell transcriptome lineages of a proto-vertebrate, Nature, 571, 349, 10.1038/s41586-019-1385-y
Denyer, 2019, Spatiotemporal developmental trajectories in the Arabidopsis root revealed using high-throughput single-cell RNA sequencing, Dev. Cell, 48, 840, 10.1016/j.devcel.2019.02.022
Jean-Baptiste, 2019, Dynamics of gene expression in single root cells of Arabidopsis thaliana, Plant Cell, 31, 993, 10.1105/tpc.18.00785
Potter, 2018, Single-cell RNA sequencing for the study of development, physiology and disease, Nat. Rev. Nephrol., 14, 479, 10.1038/s41581-018-0021-7
Ryu, 2019, Single-cell RNA sequencing resolves molecular relationships among individual plant cells, Plant Physiol., 179, 1444, 10.1104/pp.18.01482
Zhang, 2019, A single-cell RNA sequencing profiles the developmental landscape of Arabidopsis root, Mol. Plant, 12, 648, 10.1016/j.molp.2019.04.004
Nelms, 2019, Defining the developmental program leading to meiosis in maize, Science, 364, 52, 10.1126/science.aav6428
Zhang, 2020, Comparative proteomic analysis of mitochondrial proteins from maize CMS-C sterile, maintainer and restorer anthers, Plant Genome, 13, 10.1002/tpg2.20022
Picelli, 2014, Full-length RNA-seq from single cells using Smart-seq2, Nat. Protoc., 9, 171, 10.1038/nprot.2014.006
Benjamini, 1995, Controlling the false discovery rate: a practical and powerful approach to multiple testing, J. R. Stat. Soc. Ser. B-Stat. Methodol., 57, 289
Livak, 2001, Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔCT method, Methods, 25, 402, 10.1006/meth.2001.1262
Zhang, 2018, Genome-wide analysis of the basic helix-loop-helix (bHLH) transcription factor family in maize, BMC Plant Biol., 18, 235, 10.1186/s12870-018-1441-z
Li, 2017, Comparative transcriptome analysis of isonuclear-alloplasmic lines unmask key transcription factor genes and metabolic pathways involved in sterility of maize CMS-C, PeerJ, 5, 10.7717/peerj.3408
Dukowic-Schulze, 2014, The transcriptome landscape of early maize meiosis, BMC Plant Biol., 14, 118, 10.1186/1471-2229-14-118
Dukowic-Schulze, 2014, The meiotic transcriptome architecture of plants, Front. Plant Sci., 5, 220, 10.3389/fpls.2014.00220
Hobo, 2008, Various spatiotemporal expression profiles of anther-expressed genes in rice, Plant Cell Physiol., 49, 1417, 10.1093/pcp/pcn128
Chen, 2010, Meiosis-specific gene discovery in plants: RNA-Seq applied to isolated Arabidopsis male meiocytes, BMC Plant Biol., 10, 280, 10.1186/1471-2229-10-280
Perera, 2014, Reprogramming of cassava (Manihot esculenta) microspores towards sporophytic development, AoB Plants, 6, plu022, 10.1093/aobpla/plu022
Weintraub, 2017, YY1 is a structural regulator of enhancer-promoter loops, Cell, 171, 1573, 10.1016/j.cell.2017.11.008
Dhaka, 2020, Transcriptional trajectories of anther development provide candidates for engineering male fertility in sorghum, Sci. Rep., 10, 897, 10.1038/s41598-020-57717-0
X. Pan, W. Yan, Z. Chang, Y. Xu, M. Luo, C. Xu, Z. Chen, J. Wu, X. Tang, OsMYB80 regulates anther development and pollen fertility by targeting multiple biological pathways, Plant Cell Physiol. 61 (2020) 988–1004.
Unte, 2003, SPL8, an SBP-box gene that affects pollen sac development in Arabidopsis, Plant Cell, 15, 1009, 10.1105/tpc.010678
Xing, 2013, SPL8 acts together with the brassinosteroid-signaling component BIM1 in controlling Arabidopsis thaliana male fertility, Plants, 2, 416, 10.3390/plants2030416
Liu, 2020, Comparative transcriptome analysis reveals the potential mechanism of abortion in tobacco sua-cytoplasmic male sterility, Int. J. Mol. Sci., 21, 2445, 10.3390/ijms21072445
Saxena, 2020, Transcriptome profiling of differentially expressed genes in cytoplasmic male-sterile line and its fertility restorer line in pigeon pea (Cajanus cajan L.), BMC Plant Biol., 20, 74, 10.1186/s12870-020-2284-y
Z. Fu, J. Yu, X. Cheng, X. Zong, J. Xu, M. Chen, Z. Li, D. Zhang, W. Liang, The Rice basic helix-loop-helix transcription factor TDR INTERACTING PROTEIN2 is a central switch in early anther development, Plant Cell 26 (2014) 1512–1524.
B. Feng, D. Lu, X. Ma, Y. Peng, Y. Sun, G. Ning, H. Ma, Regulation of the Arabidopsis anther transcriptome by DYT1 for pollen development, Plant J. 72 (2012) 612–624.
Zhu, 2015, The DYT1-interacting proteins bHLH010, bHLH089 and bHLH091 are redundantly required for Arabidopsis anther development and transcriptome, Plant J., 83, 976, 10.1111/tpj.12942
