Silk fibroin as an additive for cell-free protein synthesis
Tài liệu tham khảo
Silverman, 2020, Cell-free gene expression: an expanded repertoire of applications, Nat Rev Genet, 21, 151, 10.1038/s41576-019-0186-3
Karim, 2016, A cell-free framework for rapid biosynthetic pathway prototyping and enzyme discovery, Metab Eng, 36, 116, 10.1016/j.ymben.2016.03.002
Sun, 2014, Linear DNA for rapid prototyping of synthetic biological circuits in an Escherichia coli based TX-TL cell-free system, ACS Synth Biol, 3, 387, 10.1021/sb400131a
Jin, 2018, Rapid production and characterization of antimicrobial colicins using Escherichia coli-based cell-free protein synthesis, Synth Biol, 3, 10.1093/synbio/ysy004
Karig, 2017, Preservation of protein expression systems at elevated temperatures for portable therapeutic production, J R Soc Interface, 14, 20161039, 10.1098/rsif.2016.1039
Pardee, 2014, Paper-based synthetic gene networks, Cell, 159, 940, 10.1016/j.cell.2014.10.004
Pardee, 2016, Rapid, low-cost detection of zika virus using programmable biomolecular components, Cell, 165, 1255, 10.1016/j.cell.2016.04.059
Pardee, 2016, Portable, on-demand biomolecular manufacturing, Cell, 167, 248, 10.1016/j.cell.2016.09.013
Duyen, 2017, Paper-based colorimetric biosensor for antibiotics inhibiting bacterial protein synthesis, J Biosci Bioeng, 123, 96, 10.1016/j.jbiosc.2016.07.015
Takahashi, 2018, A low-cost paper-based synthetic biology platform for analyzing gut microbiota and host biomarkers, Nat Commun, 9, 10.1038/s41467-018-05864-4
Meyer, 2019, Organism engineering for the bioproduction of the triaminotrinitrobenzene (TATB) precursor phloroglucinol (PG), ACS Synth Biol, 8, 2746, 10.1021/acssynbio.9b00393
Gräwe, 2019, A paper-based, cell-free biosensor system for the detection of heavy metals and date rape drugs, PloS One, 14, 10.1371/journal.pone.0210940
Salehi, 2016, Cell-free protein synthesis of a cytotoxic cancer therapeutic: onconase production and a just-add-water cell-free system, Biotechnol J, 11, 274, 10.1002/biot.201500237
Adiga, 2018, Point-of-care production of therapeutic proteins of good-manufacturing-practice quality, Nat Biomed Eng, 2, 675, 10.1038/s41551-018-0259-1
Wilding, 2019, Thermostable lyoprotectant-enhanced cell-free protein synthesis for on-demand endotoxin-free therapeutic production, N Biotech, 53, 73, 10.1016/j.nbt.2019.07.004
Stark, 2019, On-demand, cell-free biomanufacturing of conjugate vaccines at the point-of-care, Synthetic Biology
Park, 2009, A cell-free protein-producing gel, Nat Mater, 8, 432, 10.1038/nmat2419
Yang, 2013, Enhanced transcription and translation in clay hydrogel and implications for early life evolution, Sci Rep, 3, 10.1038/srep03165
Whitfield, 2019, Cell-free genetic devices confer autonomic and adaptive properties to hydrogels, Synthetic Biology
Cui, 2020, A PEGDA/DNA hybrid hydrogel for cell-free protein synthesis, Front Chem, 8, 10.3389/fchem.2020.00028
Gregorio, 2020, Unlocking applications of cell-free biotechnology through enhanced shelf life and productivity of E. coli extracts, ACS Synth Biol, 10.1021/acssynbio.9b00433
Smith, 2014, Lyophilized Escherichia coli -based cell-free systems for robust, high-density, long-term storage, Biotechniques, 56, 10.2144/000114158
Dopp, 2019, Cell-free supplement mixtures: elucidating the history and biochemical utility of additives used to support in vitro protein synthesis in E. coli extract, Biotechnol Adv, 37, 246, 10.1016/j.biotechadv.2018.12.006
Chung, 2019, The effect of macromolecular crowding on single-round transcription by Escherichia coli RNA polymerase, Nucleic Acids Res, 47, 1440, 10.1093/nar/gky1277
Ge, 2011, Cell-free protein expression under macromolecular crowding conditions, PloS One, 6, 10.1371/journal.pone.0028707
Morelli, 2011, Effects of macromolecular crowding on genetic networks, Biophys J, 101, 2882, 10.1016/j.bpj.2011.10.053
Tan, 2013, Molecular crowding shapes gene expression in synthetic cellular nanosystems, Nat Nanotechnol, 8, 602, 10.1038/nnano.2013.132
Zimmerman, 1987, Macromolecular crowding increases binding of DNA polymerase to DNA: an adaptive effect, Proc Natl Acad Sci, 84, 1871, 10.1073/pnas.84.7.1871
Klumpp, 2013, Molecular crowding limits translation and cell growth, Proc Natl Acad Sci, 110, 16754, 10.1073/pnas.1310377110
Norred, 2018, Macromolecular crowding induces spatial correlations that control gene expression bursting patterns, ACS Synth Biol, 7, 1251, 10.1021/acssynbio.8b00139
Dennis, 2012, Stabilization of organophosphorus hydrolase by entrapment in silk fibroin: formation of a robust enzymatic material suitable for surface coatings, Biomacromolecules, 13, 2037, 10.1021/bm300358g
Pritchard, 2012, Physical and chemical aspects of stabilization of compounds in silk, Biopolymers, 97, 479, 10.1002/bip.22026
Lu, 2010, Stabilization and release of enzymes from silk films, Macromol Biosci, 10, 359, 10.1002/mabi.200900388
Li, 2015, Silk-based stabilization of biomacromolecules, J Contr Release, 219, 416, 10.1016/j.jconrel.2015.09.037
Partlow, 2014, Highly tunable elastomeric silk biomaterials, Adv Funct Mater, 24, 4615, 10.1002/adfm.201400526
Kang, 2004, Crosslinking reaction of phenolic side chains in silk fibroin by tyrosinase, Fibers Polym, 5, 234, 10.1007/BF02903006
Kwon, 2015, High-throughput preparation methods of crude extract for robust cell-free protein synthesis, Sci Rep, 5, 10.1038/srep08663
Bundy, 2010, Site-specific incorporation of p -propargyloxyphenylalanine in a cell-free environment for direct Protein−Protein click conjugation, Bioconjugate Chem, 21, 255, 10.1021/bc9002844
Wang, 2019, Melanin produced by the fast-growing marine bacterium Vibrio natriegens through heterologous biosynthesis: characterization and application, Appl Environ Microbiol, 86
Rockwood, 2011, Materials fabrication from Bombyx mori silk fibroin, Nat Protoc, 6, 1612, 10.1038/nprot.2011.379
Jewett, 2004, Mimicking theEscherichia coli cytoplasmic environment activates long-lived and efficient cell-free protein synthesis, Biotechnol Bioeng, 86, 19, 10.1002/bit.20026
Vepari, 2007, Silk as a biomaterial, Prog Polym Sci, 32, 991, 10.1016/j.progpolymsci.2007.05.013
Lu, 2009, Stabilization of enzymes in silk films, Biomacromolecules, 10, 1032, 10.1021/bm800956n
Chirila, 2017, A comparative investigation of Bombyx mori silk fibroin hydrogels generated by chemical and enzymatic cross-linking: Bombyx mori Silk Fibroin Hydrogels, Biotechnol Appl Biochem, 64, 771, 10.1002/bab.1552
Partlow, 2016, Dityrosine cross-linking in designing biomaterials, ACS Biomater Sci Eng, 2, 2108, 10.1021/acsbiomaterials.6b00454
Goldfeder, 2014, Determination of tyrosinase substrate-binding modes reveals mechanistic differences between type-3 copper proteins, Nat Commun, 5, 10.1038/ncomms5505
Putthanarat, 2004, Nonlinear optical transmission of silk/green fluorescent protein (GFP) films, Polymer, 45, 8451, 10.1016/j.polymer.2004.10.014
Laohakunakorn, 2020, Bottom-up construction of complex biomolecular systems with cell-free synthetic biology, Front Bioeng Biotechnol, 8, 10.3389/fbioe.2020.00213