Siderophore-mediated iron acquisition in the entomopathogenic bacterium Pseudomonas entomophila L48 and its close relative Pseudomonas putida KT2440

Biology of Metals - Tập 22 Số 6 - Trang 951-964 - 2009
Sandra Matthijs1, Gerhard Laus2, Jean‐Marie Meyer3, Kourosch Abbaspour-Tehrani2, Matthias Schäfer4, H. Budzikiewicz4, Pierre Cornélis1
1Laboratory of Microbial Interactions, Department of Molecular and Cellular Interactions, Flanders Interuniversity Institute for Biotechnology, Vrije Universiteit Brussel, Brussels, Belgium
2Laboratory of Organic Chemistry, Vrije Universiteit Brussel, Brussels, Belgium
3Département Génétique Moléculaire, Génomique, Microbiologie, UMR, Strasbourg, France
4Institut für Organische Chemie, Universität zu Köln, Köln, Germany

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Anthoni U, Christophersen C, Nielsen PH, Gram L, Petersen BO (1995) Pseudomonine, an isoxazolidone with siderophoric activity from Pseudomonas fluorescens AH2 isolated from Lake Victorian Nile perch. J Nat Prod 58:1786–1789. doi: 10.1021/np50125a026

Barelmann I, Taraz K, Budzikiewicz H, Geoffroy VA, Meyer JM (2002) The structures of the pyoverdins from two Pseudomonas fluorescens strains accepted mutually by their respective producers. Z Naturforsch 57c:9–16

Beiderbeck H, Taraz K, Meyer JM (1999) Revised structures of the pyoverdins from Pseudomonas putida CFBP 2461 and from Pseudomonas fluorescens CFBP 2392. Biometals 12:331–338. doi: 10.1023/A:1009227520314

Briskot G, Taraz K, Budzikiewicz H (1986) Pyoverdine-type siderophores from Pseudomonas aeruginosa. Z Naturforsch C 41:497–506

Budzikiewicz H (1993) Secondary metabolites from fluorescent pseudomonads. FEMS Microbiol Rev 104:209–228. doi: 10.1111/j.1574-6968.1993.tb05868.x

Budzikiewicz H (1997) Siderophores of fluorescent pseudomonads. Z Naturforsch [C] 52:713–720

Cornelis P, Matthijs S (2002) Diversity of siderophore-mediated iron uptake systems in fluorescent pseudomonads: not only pyoverdines. Environ Microbiol 4:787–798. doi: 10.1046/j.1462-2920.2002.00369.x

Cox CD, Graham R (1979) Isolation of an iron-binding compound from Pseudomonas aeruginosa. J Bacteriol 137:357–364

Crosa JH, Walsh CT (2002) Genetics and assembly line enzymology of siderophore biosynthesis in bacteria. Microbiol Mol Biol Rev 66:223–249. doi: 10.1128/MMBR.66.2.223-249.2002

de Chial M, Ghysels B, Beatson SA, Geoffroy V, Meyer J-M, Pattery T, Baysse C, Chablain P, Parsons YN, Winstanley C, Cordwell SJ, Cornelis P (2003) Identification of type II and type III pyoverdine receptors from Pseudomonas aeruginosa. Microbiology 149:821–831. doi: 10.1099/mic.0.26136-0

Demange P, Bateman A, Mertz C, Dell A, Piémont Y, Abdullah M (1990) Structures of pyoverdins Pt, siderophores of Pseudomonas tolaasii NCPPB 2192, and pyoverdins Pf, siderophores of Pseudomonas fluorescens CCM 2798. Identification of an unusual natural amino acid. Biochemistry 29:11041–11051. doi: 10.1021/bi00502a005

Dennis JJ, Zylstra GJ (1998) Plasposons: modular self-cloning minitransposon derivatives for rapid genetic analysis of gram-negative bacterial genomes. Appl Environ Microbiol 64:2710–2715

Ge L, Seah SY (2006) Heterologous expression, purification, and characterization of an L-ornithine N 5 -hydroxylase involved in pyoverdine siderophore biosynthesis in Pseudomonas aeruginosa. J Bacteriol 188:7205–7210. doi: 10.1128/JB.00949-06

Hanahan D (1983) Studies on transformation of Escherichia coli with plasmids. J Mol Biol 166:557–580. doi: 10.1016/S0022-2836(83)80284-8

Höfte M, Buysens S, Koedam N, Cornelis P (1993) Zinc affects siderophore-mediated high affinity iron uptake systems in the rhizosphere Pseudomonas aeruginosa 7NSK2. Biometals 6:85–91. doi: 10.1007/BF00140108

Jülich M, Taraz K, Budzikiewicz H, Geoffroy V, Meyer JM, Gardan L (2001) The structure of the pyoverdin isolated from various Pseudomonas syringae pathovars. Z Naturforsch 56c:687–694

Jurkevitch E, Hadar Y, Chen Y (1992) Differential siderophore utilization and iron uptake by soil and rhizosphere bacteria. Appl Environ Microbiol 58:119–124

Koedam N, Wittouck E, Gaballa A, Gillis A, Höfte M, Cornelis P (1994) Detection and differentiation of microbial siderophores by isoelectric focusing and chrome azurol S overlay. Biometals 7:287–291. doi: 10.1007/BF00144123

Matthijs S, Abbaspour Tehrani K, Laus G, Jackson RW, Cooper RM, Cornelis P (2007) Thioquinolobactin, a Pseudomonas siderophore with antifungal and anti-Pythium activity. Environ Microbiol 9:425–434. doi: 10.1111/j.1462-2920.2006.01154.x

Matthijs S, Budzikiewicz H, Schäfer M, Whatelet B, Cornelis P (2008) Ornicorrugatin, a new siderophore from Pseudomonas fluorescens AF76. Z Naturforsch 63:8–12

Mercado-Blanco J, van der Drift KMGM, Olsson PE, Thomas-Oates JE, van Loon LC, Bakker PAHM (2001) Analysis of the pmsCEAB gene cluster involved in the biosynthesis of salicylic acid and the siderophore pseudomonine in the biocontrol strain Pseudomonas fluorescens WCS374. J Bacteriol 183:1909–1920. doi: 10.1128/JB.183.6.1909-1920.2001

Meyer J-M (1992) Exogenous siderophore-mediated iron uptake in Pseudomonas aeruginosa: possible involvement of porin OprF in iron translocation. J Gen Microbiol 138:951–958

Meyer J-M, Abdallah MA (1978) The fluorescent pigment of Pseudomonas fluorescens: biosynthesis, purification and physicochemical properties. J Gen Microbiol 107:319–328

Meyer J-M, Gruffaz C, Raharinosy V, Bezverbnaya I, Schäfer M, Budzikiewicz H (2008) Siderotyping of fluorescent Pseudomonas: molecular mass determination by mass spectrometry as a powerful pyoverdine siderotyping method. Biometals 21:259–271. doi: 10.1007/s10534-007-9115-6

Moon CD, Zhang XX, Matthijs S, Schäfer M, Budzikiewicz H, Rainey PB (2008) Genomic, genetic and structural analysis of pyoverdine-mediated iron acquisition in the plant growth-promoting bacterium Pseudomonas fluorescens SBW25. BMC Microbiol 8:7. doi: 10.1186/1471-2180-8-7

Mossialos D, Ochsner U, Baysse C, Chablain P, Pirnay JP, Koedam N, Budzikiewicz H, Fernández DU, Schäfer M, Ravel J, Cornelis P (2002) Identification of new, conserved, non-ribosomal peptide synthetases from fluorescent pseudomonads involved in the biosynthesis of the siderophore pyoverdine. Mol Microbiol 45:1673–1685

Pirnay JP, Matthijs S, Colak H, Chablain P, Bilocq F, Van Eldere J, De Vos D, Zizi M, Triest L, Cornelis P (2005) Global Pseudomonas aeruginosa biodiversity as reflected in a Belgian river. Environ Microbiol 7:969–980. doi: 10.1111/j.1462-2920.2005.00776.x

Poole K, Young L, Neshat S (1990) Enterobactin-mediated iron transport in Pseudomonas aeruginosa. J Bacteriol 172:6991–6996

Raaijmakers JM, Van Der Sluis I, Koster M, Bakker PAHM, Weisbeek PJ, Schippers B (1995) Utilization of heterologous siderophores and rhizosphere competence of fluorescent Pseudomonas spp. Can J Microbiol 41:126–135

Rausch C, Weber T, Kohlbacher O, Wohlleben W, Huson DH (2005) Specificity prediction of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines (TSVMs). Nucleic Acids Res 33:5799–5808. doi: 10.1093/nar/gki885

Ravel J, Cornelis P (2003) Genomics of pyoverdine-mediated iron uptake in pseudomonads. Trends Microbial 11:195–200

Risse D, Beiderbeck H, Taraz K, Budzikiewicz H, Gustine D (1998) Corrugatin, a lipopeptide siderophore from Pseudomonas corrugata. Z Naturforsch 53c:295–304

Salah-el-Din ALM, Kyslic P, Stephan D, Abdallah MA (1997) Bacterial iron transport: structure elucidation by FAB-MS and by 2 D NMR (1H, 13C, 15N) of pyoverdin G4R, a peptidic siderophore produced by a nitrogen-fixing strain of Pseudomonas putida. Tetrahedron Lett 53:12539–12552

Schnider-Keel U, Seematter A, Maurhofer M, Blumer C, Duffy B, Gigot-Bonnefoy C, Reimmann C, Notz R, Défago G, Haas D, Keel C (2000) Autoinduction of 2, 4-diacetylphloroglucinol biosynthesis in the biocontrol agent Pseudomonas fluorescens CHA0 and repression by the bacterial metabolites salicylate and pyoluteorin. J Bacteriol 182:1215–1225. doi: 10.1128/JB.182.5.1215-1225.2000

Schwyn B, Neilands JB (1987) Universal chemical assay for the detection and determination of siderophores. Anal Biochem 160:47–56. doi: 10.1016/0003-2697(87)90612-9

Singh GM, Fortin PD, Koglin A, Walsh CT (2008) beta-Hydroxylation of the aspartyl residue in the phytotoxin syringomycin E: characterization of two candidate hydroxylases AspH and SyrP in Pseudomonas syringae. Biochemistry 47:11310–11320. doi: 10.1021/bi801322z

Stachelhaus T, Mootz HD, Marahiel MA (1999) The specificity-conferring code of adenylation domains in nonribosomal peptide synthetases. Chem Biol 6:493–505. doi: 10.1016/S1074-5521(99)80082-9

Teintze M, Hossain MB, Barnes CL, Leong J, van der Helm D (1981) Structure of ferric pseudobactin, a siderophore from a plant growth promoting Pseudomonas. Biochemistry 20:6446–6457. doi: 10.1021/bi00525a025

Tolmasky ME, Actis LA, Crosa JH (1995) A histidine decarboxylase gene encoded by the Vibrio anguillarum plasmid pJM1 is essential for virulence: histamine is a precursor in the biosynthesis of anguibactin. Mol Microbiol 15:87–95. doi: 10.1111/j.1365-2958.1995.tb02223.x

Vieira J, Messing J (1991) New pUC-derived cloning vectors with different selectable markers and DNA replication origins. Gene 100:189–194

Vodovar N, Vallenet D, Cruveiller S, Rouy Z, Barbe V, Acosta C, Cattolico L, Jubin C, Lajus A, Segurens B, Vacherie B, Wincker P, Weissenbach J, Lemaitre B, Médigue C, Boccard F (2006) Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila. Nat Biotechnol 24:673–679. doi: 10.1038/nbt1212

Voisard C, Bull C, Keel C, Laville J, Maurhofer M, Schnider U, Défago G, Haas D (1994) Biocontrol of root diseases by Pseudomonas fluorescens CHA0: current concepts and experimental approaches. In: O’Gara F, Dowling D, Boesten B (eds) Molecular ecology of rhizosphere microorganisms. VCH, Weinheim, pp 67–89

Wong-Lun-Sang S, Bernardini JJ, Hennard C, Kyslic P, Dell A, Abdallah MA (1996) Bacterial siderophores: structure elucidation, 2 D 1H and 13C NMR assignments of pyoverdins produced by Pseudomonas fluorescens CHA0. Tetrahedron Lett 37:3329–3332. doi: 10.1016/0040-4039(96)00569-2

Yunta F, García-Marco S, Lucena JJ, Gómez-Gallego M, Alcázar R, Sierra MA (2003) Chelating agents related to ethylenediamine bis(2-hydroxyphenyl)acetic acid (EDDHA): synthesis, characterization, and equilibrium studies of the free ligands and their Mg2+, Ca2+, Cu2+, and Fe3+ chelates. Inorg Chem 42:5412–5421. doi: 10.1021/ic034333j