Self-assemble peptide biomaterials and their biomedical applications

Gutteridge, 2005, Understanding nature's catalytic toolkit, Trends Biochem. Sci., 30, 622, 10.1016/j.tibs.2005.09.006 Koutsopoulos, 2016, Self-assembling peptide nanofiber hydrogels in tissue engineering and regenerative medicine: progress, design guidelines, and applications, J. Biomed. Mater. Res., 104, 1002, 10.1002/jbm.a.35638 Mandal, 2014, Self-assembly of peptides to nanostructures, Org. Biomol. Chem., 12, 3544, 10.1039/C4OB00447G Wang, 2014, Cellular membrane enrichment of self-assembling d-peptides for cell surface engineering, ACS Appl. Mater. Interfaces, 6, 9815, 10.1021/am502250r Wen, 2013, Retaining antibodies in tumors with a self-assembling injectable system, Mol. Pharm., 10, 1035, 10.1021/mp300504z Saunders, 2013, Engineering fluorogen activating proteins into self-assembling materials, Bioconjug. Chem., 24, 803, 10.1021/bc300613h Wen, 2014, Antibody-functionalized peptidic membranes for neutralization of allogeneic skin antigen-presenting cells, Acta Biomater., 10, 4759, 10.1016/j.actbio.2014.08.003 Zhang, 1993, Spontaneous assembly of a self-complementary oligopeptide to form a stable macroscopic membrane, Proc. Natl. Acad. Sci., 90, 3334, 10.1073/pnas.90.8.3334 Zhang, 2003, Fabrication of novel biomaterials through molecular self-assembly, Nat. Biotechnol., 21, 1171, 10.1038/nbt874 Caplan, 2002, Control of self-assembling oligopeptide matrix formation through systematic variation of amino acid sequence, Biomaterials, 23, 219, 10.1016/S0142-9612(01)00099-0 Zhang, 1994, Unusually stable β-sheet formation in an ionic self-complementary oligopeptide, Biopolymers, 34, 663, 10.1002/bip.360340508 Hauser, 2010, Designer self-assembling peptide materials for diverse applications, Macromol. Symp., 295, 30, 10.1002/masy.200900171 Yokoi, 2005, Dynamic reassembly of peptide RADA16 nanofiber scaffold, Proc. Natl. Acad. Sci. U.S.A., 102, 8414, 10.1073/pnas.0407843102 Pradeep, 2011, Self-assembling peptides: implications for patenting in drug delivery and tissue engineering, Recent Pat. Drug Deliv. Formulation, 5, 24, 10.2174/187221111794109510 Nagy, 2011, Enhanced mechanical rigidity of hydrogels formed from enantiomeric peptide assemblies, J. Am. Chem. Soc., 133, 14975, 10.1021/ja206742m Li, 2013, D-amino acids boost the selectivity and confer supramolecular hydrogels of a nonsteroidal anti-inflammatory drug (NSAID), J. Am. Chem. Soc., 135, 542, 10.1021/ja310019x Moore, 2017, Self-assembling multidomain peptide nanofibers for delivery of bioactive molecules and tissue regeneration, Accounts Chem. Res., 50, 714, 10.1021/acs.accounts.6b00553 Aggeli, 2001, Hierarchical self-assembly of chiral rod-like molecules as a model for peptide β-sheet tapes, ribbons, fibrils, and fibers, Proc. Natl. Acad. Sci., 98, 11857, 10.1073/pnas.191250198 Zhang, 2011, Self-assembly of a peptide amphiphile based on hydrolysed Bombyx mori silk fibroin, Chem. Commun., 47, 10296, 10.1039/c1cc12633d Saracino, 2014, Modelling and analysis of early aggregation events of BMHP1-derived self-assembling peptides, J. Biomol. Struct. Dyn., 32, 759, 10.1080/07391102.2013.790848 Gelain, 2011, BMHP1-Derived self-assembling peptides: hierarchically assembled structures with self-healing propensity and potential for tissue engineering applications, ACS Nano, 5, 1845, 10.1021/nn102663a Silva, 2013, Synthesis and characterization of designed BMHP1-derived self-assembling peptides for tissue engineering applications, Nanoscale, 5, 704, 10.1039/C2NR32656F Ryadnov, 2003, Engineering the morphology of a self-assembling protein fibre, Nat. Mater., 2, 329, 10.1038/nmat885 Papapostolou, 2007, Engineering nanoscale order into a designed protein fiber, Proc. Natl. Acad. Sci., 104, 10853, 10.1073/pnas.0700801104 Yu, 2002, Coiled-coils: stability, specificity, and drug delivery potential, Adv. Drug Deliv. Rev., 54, 1113, 10.1016/S0169-409X(02)00058-3 Mehrban, 2015, Functionalized α-helical peptide hydrogels for neural tissue engineering, ACS Biomater. Sci. Eng., 1, 431, 10.1021/acsbiomaterials.5b00051 Lomander, 2005, Hierarchical self-assembly of a coiled-coil peptide into fractal structure, Nano Lett., 5, 1255, 10.1021/nl050203r Holowka, 2005, Charged polypeptide vesicles with controllable diameter, J. Am. Chem. Soc., 127, 12423, 10.1021/ja053557t Xu, 2005, Reversible hydrogels from self-assembling genetically engineered protein block copolymers, Biomacromolecules, 6, 1739, 10.1021/bm050017f Hirst, 2005, Two-component gel-phase materials—highly tunable self-assembling systems, Chem. Eur J., 11, 5496, 10.1002/chem.200500241 Banwell, 2009, Rational design and application of responsive α-helical peptide hydrogels, Nat. Mater., 8, 596, 10.1038/nmat2479 Matsui, 2017, Rational identification of aggregation hotspots based on secondary structure and amino acid hydrophobicity, Sci. Rep., 7, 9558, 10.1038/s41598-017-09749-2 Condon, 2018, Development of a coarse-grained model of collagen-like peptide (CLP) for studies of CLP triple helix melting, J. Phys. Chem. B, 122, 1929, 10.1021/acs.jpcb.7b10916 Ramachandran, 1955, Structure of collagen, Nature, 176, 593, 10.1038/176593a0 Luo, 2013, Collagen-like peptides and peptide–polymer conjugates in the design of assembled materials, Eur. Polym. J., 49, 2998, 10.1016/j.eurpolymj.2013.05.013 Fallas, 2012, Structural insights into charge pair interactions in triple helical collagen-like proteins, J. Biol. Chem., 287, 8039, 10.1074/jbc.M111.296574 Persikov, 2005, Prediction of collagen stability from amino acid sequence, J. Biol. Chem., 280, 19343, 10.1074/jbc.M501657200 Boudko, 2004, Structure formation in the C terminus of type III collagen guides disulfide cross-linking, J. Mol. Biol., 335, 1289, 10.1016/j.jmb.2003.11.054 Cejas, 2008, Thrombogenic collagen-mimetic peptides: self-assembly of triple helix-based fibrils driven by hydrophobic interactions, Proc. Natl. Acad. Sci., 105, 8513, 10.1073/pnas.0800291105 Cejas, 2007, Collagen-related Peptides:  self-assembly of short, single strands into a functional biomaterial of micrometer scale, J. Am. Chem. Soc., 129, 2202, 10.1021/ja066986f KADLER, 1996, Collagen fibril formation, Biochem. J., 316, 1, 10.1042/bj3160001 Rele, 2007, D-periodic collagen-mimetic microfibers, J. Am. Chem. Soc., 129, 14780, 10.1021/ja0758990 Pires, 2012, Controlling the morphology of metal-promoted higher ordered assemblies of collagen peptides with varied core lengths, Langmuir, 28, 1993, 10.1021/la203848r Pires, 2011, Metal-mediated tandem coassembly of collagen peptides into banded microstructures, J. Am. Chem. Soc., 133, 14469, 10.1021/ja2042645 Jin, 2015, Biomimetic self-templated hierarchical structures of collagen-like peptide amphiphiles, Nano Lett., 15, 7138, 10.1021/acs.nanolett.5b03313 Betre, 2002, Characterization of a genetically engineered elastin-like polypeptide for cartilaginous tissue repair, Biomacromolecules, 3, 910, 10.1021/bm0255037 Deming, 2012, vol. 310 Wang, 2017, Covalently adaptable elastin-like protein–hyaluronic acid (ELP–HA) hybrid hydrogels with secondary thermoresponsive crosslinking for injectable stem cell delivery, Adv. Funct. Mater., 27, 1605609, 10.1002/adfm.201605609 Shi, 2014, Genetically engineered nanocarriers for drug delivery, Int. J. Nanomed., 9, 1617 Eskandari, 2017, Recent advances in self-assembled peptides: implications for targeted drug delivery and vaccine engineering, Adv. Drug Deliv. Rev., 110–111, 169, 10.1016/j.addr.2016.06.013 Wang, 2014, High throughput screening of dynamic silk-elastin-like protein biomaterials, Adv. Funct. Mater., 24, 4303, 10.1002/adfm.201304106 Raucher, 2008, Thermally targeted delivery of chemotherapeutics and anti-cancer peptides by elastin-like polypeptide, Expert Opin. Drug Deliv., 5, 353, 10.1517/17425247.5.3.353 Huang, 2016, Design of multistimuli responsive hydrogels using integrated modeling and genetically engineered silk–elastin-like proteins, Adv. Funct. Mater., 26, 4113, 10.1002/adfm.201600236 Herrero-Vanrell, 2005, Self-assembled particles of an elastin-like polymer as vehicles for controlled drug release, J. Contr. Release, 102, 113, 10.1016/j.jconrel.2004.10.001 Zhang, 2002, Design of nanostructured biological materials through self-assembly of peptides and proteins, Curr. Opin. Chem. Biol., 6, 865, 10.1016/S1367-5931(02)00391-5 Urry, 1997, Physical chemistry of biological free energy transduction as demonstrated by elastic protein-based polymers, J. Phys. Chem. B, 101, 11007, 10.1021/jp972167t Hamley, 2011, Self-assembly of amphiphilic peptides, Soft Matter, 7, 4122, 10.1039/c0sm01218a Cui, 2010, Self-assembly of peptide amphiphiles: from molecules to nanostructures to biomaterials, Peptide Sci., 94, 1, 10.1002/bip.21328 Koss, 2016, Neural tissue engineering: bioresponsive nanoscaffolds using engineered self-assembling peptides, Acta Biomater., 44, 2, 10.1016/j.actbio.2016.08.026 Niece, 2003, Self-assembly combining two bioactive peptide-amphiphile molecules into nanofibers by electrostatic attraction, J. Am. Chem. Soc., 125, 7146, 10.1021/ja028215r Beniash, 2005, Self-assembling peptide amphiphile nanofiber matrices for cell entrapment, Acta Biomater., 1, 387, 10.1016/j.actbio.2005.04.002 Harrington, 2006, Branched peptide-amphiphiles as self-assembling coatings for tissue engineering scaffolds, J. Biomed. Mater. Res., 78A, 157, 10.1002/jbm.a.30718 Barnard, 2012, Self-assembled multivalency: dynamic ligand arrays for high-affinity binding, Angew. Chem. Int. Ed., 51, 6572, 10.1002/anie.201200076 Ian, 2011, Nanoscale tissue engineering: spatial control over cell-materials interactions, Nanotechnology, 22, 212001, 10.1088/0957-4484/22/21/212001 Peter, 2009, Developmental and pathogenic mechanisms of basement membrane assembly, Curr. Pharmaceut. Des., 15, 1277, 10.2174/138161209787846766 Durbeej, 2009, Laminins, Cell Tissue Res., 339, 259, 10.1007/s00441-009-0838-2 Williams, 2008, Fibronectin expression modulates mammary epithelial cell proliferation during acinar differentiation, Cancer Res., 68, 3185, 10.1158/0008-5472.CAN-07-2673 Zhu, 2013, 9 - biomimetic hydrogels as scaffolds for tissue-engineering applications, 238 Rahmany, 2013, Biomimetic approaches to modulate cellular adhesion in biomaterials: a review, Acta Biomater., 9, 5431, 10.1016/j.actbio.2012.11.019 Li, 2010, Neural differentiation directed by self-assembling peptide scaffolds presenting laminin-derived epitopes, J. Biomed. Mater. Res., 94A, 688 Powell, 2000, Neural cell response to multiple novel sites on laminin-1, J. Neurosci. Res., 61, 302, 10.1002/1097-4547(20000801)61:3<302::AID-JNR8>3.0.CO;2-G Sur, 2013, Tuning supramolecular mechanics to guide neuron development, Biomaterials, 34, 4749, 10.1016/j.biomaterials.2013.03.025 Silva, 2004, Selective differentiation of neural progenitor cells by high-epitope density nanofibers, Science, 303, 1352, 10.1126/science.1093783 Cigognini, 2011, Evaluation of early and late effects into the acute spinal cord injury of an injectable functionalized self-assembling scaffold, PLoS One, 6, e19782, 10.1371/journal.pone.0019782 Cheng, 2013, Neural stem cells encapsulated in a functionalized self-assembling peptide hydrogel for brain tissue engineering, Biomaterials, 34, 2005, 10.1016/j.biomaterials.2012.11.043 Senta, 2009, Cell responses to bone morphogenetic proteins and peptides derived from them: biomedical applications and limitations, Cytokine Growth Factor Rev., 20, 213, 10.1016/j.cytogfr.2009.05.006 Visser, 2016, Peptides for bone tissue engineering, J. Contr. Release, 244, 122, 10.1016/j.jconrel.2016.10.024 Suzuki, 2000, Alginate hydrogel linked with synthetic oligopeptide derived from BMP-2 allows ectopic osteoinduction in vivo, J. Biomed. Mater. Res., 50, 405, 10.1002/(SICI)1097-4636(20000605)50:3<405::AID-JBM15>3.0.CO;2-Z Esmaiel, 2013, Osteogenic peptides in bone regeneration, Curr. Pharmaceut. Des., 19, 3391, 10.2174/1381612811319190006 He, 2012, Combined effect of osteopontin and BMP-2 derived peptides grafted to an adhesive hydrogel on osteogenic and vasculogenic differentiation of marrow stromal cells, Langmuir, 28, 5387, 10.1021/la205005h Deng, 2018, A novel hydrogel surface grafted with dual functional peptides for sustaining long-term self-renewal of human induced pluripotent stem cells and manipulating their osteoblastic maturation, Adv. Funct. Mater., 28, 1705546, 10.1002/adfm.201705546 Wang, 2015, In vitro culture and directed osteogenic differentiation of human pluripotent stem cells on peptides-decorated two-dimensional microenvironment, ACS Appl. Mater. Interfaces, 7, 4560, 10.1021/acsami.5b00188 Kim, 2012, Osteogenesis induced by a bone forming peptide from the prodomain region of BMP-7, Biomaterials, 33, 7057, 10.1016/j.biomaterials.2012.06.036 D'Andrea, 2005, Targeting angiogenesis: structural characterization and biological properties of a <em>de novo</em> engineered VEGF mimicking peptide, Proc. Natl. Acad. Sci. U.S.A., 102, 14215, 10.1073/pnas.0505047102 Finetti, 2012, Functional and pharmacological characterization of a VEGF mimetic peptide on reparative angiogenesis, Biochem. Pharmacol., 84, 303, 10.1016/j.bcp.2012.04.011 Huang, 2011, Self-assembling peptide–polysaccharide hybrid hydrogel as a potential carrier for drug delivery, Soft Matter, 7, 6222, 10.1039/c1sm05375b Wen, 2014, Coassembly of amphiphilic peptide EAK16-II with histidinylated analogues and implications for functionalization of β-sheet fibrils in vivo, Biomaterials, 35, 5196, 10.1016/j.biomaterials.2014.03.009 Basak, 2014, Multi-stimuli responsive self-healing metallo-hydrogels: tuning of the gel recovery property, Chem. Commun., 50, 2356, 10.1039/C3CC48896A Saha, 2014, Amino acid-based multiresponsive low-molecular weight metallohydrogels with load-bearing and rapid self-healing abilities, Chem. Commun., 50, 3004, 10.1039/C3CC49869G Chen, 2018, Functional self-healing materials and their potential applications in biomedical engineering, Adv. Compos. Hybrid Mater., 1, 94, 10.1007/s42114-017-0009-y Diesendruck, 2015, Biomimetic self-healing, Angew. Chem. Int. Ed., 54, 10428, 10.1002/anie.201500484 Herbst, 2013, Self-healing polymers via supramolecular forces, Macromol. Rapid Commun., 34, 203, 10.1002/marc.201200675 Cao, 2017, Multiple hydrogen bonding enables the self-healing of sensors for human–machine interactions, Angew. Chem., 129, 8921, 10.1002/ange.201704217 Chen, 2016, Repetitive biomimetic self-healing of Ca2+-induced nanocomposite protein hydrogels, Sci. Rep., 6, 30804, 10.1038/srep30804 Chen, 2016, Self-healing of thermally-induced, biocompatible and biodegradable protein hydrogel, RSC Adv., 6, 56183, 10.1039/C6RA11239K Haines-Butterick, 2007, Controlling hydrogelation kinetics by peptide design for three-dimensional encapsulation and injectable delivery of cells, Proc. Natl. Acad. Sci., 104, 7791, 10.1073/pnas.0701980104 Liu, 2016, Highly flexible and resilient elastin hybrid cryogels with shape memory, injectability, conductivity, and magnetic responsive properties, Adv. Mater., 28, 7758, 10.1002/adma.201601066 Fan, 2015, Directly coating hydrogel on filter paper for effective oil–water separation in highly acidic, alkaline, and salty environment, Adv. Funct. Mater., 25, 5368, 10.1002/adfm.201501066 Gavel, 2018, Investigations of peptide-based biocompatible injectable shape-memory hydrogels: differential biological effects on bacterial and human blood cells, ACS Appl. Mater. Interfaces, 10, 10729, 10.1021/acsami.8b00501 Xu, 2014, Three-dimensional in vitro tumor models for cancer research and drug evaluation, Biotechnol. Adv., 32, 1256, 10.1016/j.biotechadv.2014.07.009 Motamed, 2016, A self-assembling β-peptide hydrogel for neural tissue engineering, Soft Matter, 12, 2243, 10.1039/C5SM02902C Annabi, 2014, 25th anniversary article: rational design and applications of hydrogels in regenerative medicine, Adv. Mater., 26, 85, 10.1002/adma.201303233 Peak, 2015, Elastomeric cell-laden nanocomposite microfibers for engineering complex tissues, Cell. Mol. Bioeng., 8, 404, 10.1007/s12195-015-0406-7 Bussmann, 2016, Chondrogenic potential of human dermal fibroblasts in a contractile, soft, self-assembling, peptide hydrogel, J. Tissue Eng. Regenerat. Med., 10, E54, 10.1002/term.1766 Ni, 2013, Self-assembling peptide nanofiber scaffolds enhance dopaminergic differentiation of mouse pluripotent stem cells in 3-dimensional culture, PLoS One, 8, e84504, 10.1371/journal.pone.0084504 Holmes, 2000, Extensive neurite outgrowth and active synapse formation on self-assembling peptide scaffolds, Proc. Natl. Acad. Sci., 97, 6728, 10.1073/pnas.97.12.6728 Wan, 2016, Self-assembling peptide hydrogel for intervertebral disc tissue engineering, Acta Biomater., 46, 29, 10.1016/j.actbio.2016.09.033 Hee, 2015, Self-assembling peptide nanofibers coupled with neuropeptide substance P for bone tissue engineering, Tissue Eng., 21, 1237 Sieminski, 2008, Primary sequence of ionic self-assembling peptide gels affects endothelial cell adhesion and capillary morphogenesis, J. Biomed. Mater. Res., 87A, 494, 10.1002/jbm.a.31785 Li, 2018, Biomimetic ultralight, highly porous, shape-adjustable, and biocompatible 3D graphene minerals via incorporation of self-assembled peptide nanosheets, Adv. Funct. Mater., 28, 1801056, 10.1002/adfm.201801056 Tao, 2015, BMP7-Based functionalized self-assembling peptides for nucleus pulposus tissue engineering, ACS Appl. Mater. Interfaces, 7, 17076, 10.1021/acsami.5b03605 Çakmak, 2016, A silk fibroin and peptide amphiphile-based Co-culture model for osteochondral tissue engineering, Macromol. Biosci., 16, 1212, 10.1002/mabi.201600013 Zhou, 2016, Controlled release of TGF-beta 1 from RADA self-assembling peptide hydrogel scaffolds, Drug Des. Dev. Ther., 10, 3043, 10.2147/DDDT.S109545 Kumar, 2015, Self-assembling multidomain peptides tailor biological responses through biphasic release, Biomaterials, 52, 71, 10.1016/j.biomaterials.2015.01.079 Mazza, 2013, Nanofiber-based delivery of therapeutic peptides to the brain, ACS Nano, 7, 1016, 10.1021/nn305193d Guo, 2012, Sustained delivery of VEGF from designer self-assembling peptides improves cardiac function after myocardial infarction, Biochem. Biophys. Res. Commun., 424, 105, 10.1016/j.bbrc.2012.06.080 Polo-Corrales, 2014, Scaffold design for bone regeneration, J. Nanosci. Nanotechnol., 14, 15, 10.1166/jnn.2014.9127 Alam, 2012, Novel dipeptide nanoparticles for effective curcumin delivery, Int. J. Nanomed., 7, 4207