Secondary metabolite profiling, growth profiles and other tools for species recognition and important Aspergillus mycotoxins

Abarca, 1997, New ochratoxigenic species in the genus Aspergillus, Journal of Food Protection, 60, 1580, 10.4315/0362-028X-60.12.1580 Andersen, 2002, Physiological studies of Alternaria and Penicillium species from similar substrata, Systematic and Applied Microbiology, 25, 162, 10.1078/0723-2020-00092 Ayer, 1981, Identification of sterigmatocystin as a metabolite of Monocillium nordinii, Canadian Journal of Microbiology, 27, 846, 10.1139/m81-131 Bayman, 2002, Ochratoxin production by the species Aspergillus ochraceus group and Aspergillus alliaceus, Applied and Environmental Microbiology, 68, 2326, 10.1128/AEM.68.5.2326-2329.2002 1992 Bok, 2005, LaeA, a regulator of morphogenetic fungal virulence factors, Eukaryotic Cell, 4, 1574, 10.1128/EC.4.9.1574-1582.2005 Bok, 2004, LaeA, a regulator of secondary metabolism in Aspergillus spp, Eukaryotic Cell, 3, 527, 10.1128/EC.3.2.527-535.2004 Bok, 2006, Secondary metabolic gene cluster silencing in Aspergillus nidulans, Molecular Microbiology, 61, 1636, 10.1111/j.1365-2958.2006.05330.x Bradshaw, 2006, A polyketide synthase gene required for biosynthesis of the aflatoxin-like toxin, dothistromin, Mycopathologia, 161, 283, 10.1007/s11046-006-0240-5 Brown, 1996, Twenty-five co-regulated transcripts define a sterigmatocystin gene cluster in Aspergillus nidulans, Proceedings of the National Academy of Sciences U.S.A., 93, 1418, 10.1073/pnas.93.4.1418 Calvo, 2004, veA is required for toxin and sclerotial production in Aspergillus parasiticus, Applied and Environmental Microbiology, 70, 4733, 10.1128/AEM.70.8.4733-4739.2004 Calvo, 1999, Sporogenic effect of polyunsaturated fatty acids on development of Aspergillus spp, Applied and Environmental Microbiology, 65, 3668, 10.1128/AEM.65.8.3668-3673.1999 Cary, 2006, Aflatoxigenicity in Aspergillus: molecular genetics, phylogenetic relationships and evolutionary implications, Mycopathologia, 162, 167, 10.1007/s11046-006-0051-8 Chang, 1995, Increased expression of Aspergillus parasiticus aflR, encoding a sequence-specific DNA-binding protein, relieves nitrate inhibition of aflatoxin biosynthesis, Applied and Environmental Microbiology, 61, 2372, 10.1128/AEM.61.6.2372-2377.1995 Chiou, 2002, Chromosomal location plays a role in regulation of aflatoxin gene expression in Aspergillus parasiticus, Applied and Environmental Microbiology, 68, 306, 10.1128/AEM.68.1.306-315.2002 Crawford, 2006, Identification of a starter unit acyl-carrier protein transacylase domain in an iterative type I polyketide synthase, Proceedings of the National Academy of Sciences U.S.A., 103, 16728, 10.1073/pnas.0604112103 Ehrlich, 2006, Evolution of the aflatoxin gene cluster, Mycotoxin Research, 22, 9, 10.1007/BF02954551 Ehrlich, 2005, An aflatoxin biosynthesis cluster gene encodes a novel oxidase required for conv. of versicolorin a to sterigmatocystin, Applied and Environmental Microbiology, 71, 8963, 10.1128/AEM.71.12.8963-8965.2005 Ehrlich, 2005, Aflatoxin biosynthesis gene clusters and flanking regions, Journal of Applied Microbiology, 99, 518, 10.1111/j.1365-2672.2005.02637.x Fang, 2007, A fermented substance from Aspergillus phoenicis reduces liver fibrosis induced by carbon tetrachloride in rats, Bioscience Biotechnology Biochemistry, 71, 1154, 10.1271/bbb.60604 Filtenborg, 1983, Simple screening method for moulds producing intracellular mycotoxins in pure cultures, Applied and Environmental Microbiology, 45, 581, 10.1128/AEM.45.2.581-585.1983 Frisvad, 1989, The use of high-performance liquid chromatography and diode array detection in fungal chemotaxonomy based on profiles of secondary metabolites, Botanical Journal of the Linnean Society, 99, 81, 10.1111/j.1095-8339.1989.tb00393.x 1998 Frisvad, 1998, Role and use of secondary metabolites in fungal taxonomy, 289 Frisvad, 2004, New ochratoxin A producing species of Aspergillus section Circumdati, Studies in Mycology, 50, 23 Frisvad, 2005, Taxonomic comparison of three different groups of aflatoxin producers and a new efficient producer of aflatoxin B1, sterigmatocystin and 3-O-methylsterigmatocystin, Aspergillus rambellii sp. nov., Systematic and Applied Microbiology, 28, 442, 10.1016/j.syapm.2005.02.012 Frisvad, 2006, Recommendations concerning the chronic problem of misidentification of mycotoxigenic fungi associated with foods and feeds, Advances in Experimental Medicine and Biology, 571, 33, 10.1007/0-387-28391-9_2 Frisvad, 2007, Mycotoxin producers, 135 Frisvad, 2007, The use of secondary metabolite profiling in chemotaxonomy of filamentous fungi, Mycological Research Fujii, 2001, Identification of Claisen cyclase domain in fungal polyketide synthase WA, a naphthopyrone synthase of Aspergillus nidulans, Chemistry and Biology, 8, 189, 10.1016/S1074-5521(00)90068-1 Janzen, 1977, Why fruits rot, seeds mold, and meats spoils, American Naturalist, 111, 691, 10.1086/283200 Galagan, 2005, Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae, Nature, 438, 1105, 10.1038/nature04341 Greval, 1995, Fungal production of citric acid, Biotechnology Advances, 13, 209, 10.1016/0734-9750(95)00002-8 Henry, 2005, Synthesis and fate of o-carboxybenzophenones in the biosynthesis of aflatoxin, Journal of the American Chemical Society, 127, 3300, 10.1021/ja045520z Hicks, 1997, Aspergillus sporulation and mycotoxin production both require inactivation of the FadA G alpha protein-dependent signaling pathway, EMBO Journal, 16, 4916, 10.1093/emboj/16.16.4916 Joshi, 2002, Bioactive natural products from a sclerotium-colonizing isolate of Humicola fuscoatra, Journal of Natural Products, 65, 1734, 10.1021/np020295p Karlshøj, 2007, Fungal volatiles: Biomarkers of good and bad food quality, 279 Keller, 2006, LaeA, a global regulator of Aspergillus toxins, Medical Mycology, 44, S83, 10.1080/13693780600835773 Klich, 1988 Larsen, 2005, Phenotypic taxonomy and metabolite profiling in microbial drug discovery, Natural Product Reports, 22, 672, 10.1039/b404943h Lee, 1994, Overexpression of flbA, an early regulator of Aspergillus asexual sporulation, leads to activation of brlA and premature initiation of development, Molecular Microbiology, 14, 323, 10.1111/j.1365-2958.1994.tb01293.x Lee, 1996, FluG and flbA function interdependently to initiate conidiophore development in Aspergillus nidulans through brlA beta activation, EMBO Journal, 15, 299, 10.1002/j.1460-2075.1996.tb00360.x Magnuson, 2004, Organic acid production by filamentous fungi, 307 Mata, 2007, Agrobacterium-mediated insertional mutagenesis of the ochratoxigenic fungus Aspergillus westerdijkiae, Canadian Journal of Microbiology, 53, 148, 10.1139/w06-100 Mo, 2005, Microbiological analysis and antibacterial effects of the indigenous fermented Puer tea, Agrofood Industry Hi-Tech, 16, 16 Moyer, 1953, Effect of alcohols on the mycological production of citric acid in surface and submerged culture. I. Nature of the alcohol effect, Applied Microbiology, 1, 1, 10.1128/AEM.1.1.7-13.1953 Murakami, 1976, A brief history of classification of the black aspergilli including the Kuro-koji molds. Taxonomic studies on Japanese Industrial strains of the Aspergillus (Part 24), Journal of the Society of Brewing, Japan, 71, 952, 10.6013/jbrewsocjapan1915.71.952 Murakami, 1979, Tables of mycological characters of the representative strains of the black aspergilli. Taxonomic studies on Japanese industrial strains of the Aspergillus (Part 30), Journal of the Society of Brewing, Japan, 74, 466, 10.6013/jbrewsocjapan1915.74.466 Nielsen, 2004, Chemical identification of fungi - metabolite profiling and metabolomics, 19 Nierman, 2005, Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus, Nature, 438, 1151, 10.1038/nature04332 O'Callaghan, 2006, Molecular characterization of ochratoxin A biosynthesis and producing fungi, Advances in Applied Microbiology, 58, 227, 10.1016/S0065-2164(05)58007-9 O'Callaghan, 2006, Ochratoxin A biosynthetic genes in Aspergillus ochraceus are differentially regulated by pH and nutritional stimuli, Fungal Genetics and Biology, 43, 213, 10.1016/j.fgb.2005.11.005 Pel, 2007, Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88, Nature Biotechnology, 25, 221, 10.1038/nbt1282 Perrone, 2007, Aspergillus uvarum sp. nov., an uniseriate black Aspergillus species isolated from grapes in Europe, International Journal of Systematic and Evolutionary Microbiology Rohlfs, 2005, Competition with filamentous fungi and its implication for a gregarious lifestyle in insects living on ephemeral resources, Ecological Entomology, 30, 556, 10.1111/j.0307-6946.2005.00722.x Samson, 2004, New ochratoxin A or sclerotium producing species of Aspergillus section Nigri, Studies in Mycology, 50, 45 Samson, 2007, Diagnostic tools to identify black aspergilli, Studies in Mycology, 59, 129, 10.3114/sim.2007.59.13 Schauer, 2004, Biocatalysis and biotransformation, 237 Schmidt-Heydt, 2007, A microarray for monitoring the production of mycotoxins in foods, International Journal of Food Microbiology, 117, 131, 10.1016/j.ijfoodmicro.2007.01.014 Sekita, 1981, The bioproduction of mycotoxins by Chaetomium species, Maikotokishin (Tokyo), 13, 46 Smedsgaard, 1996, Using direct electrospray mass spectrometry in taxonomy and secondary metabolite profiling of crude fungal extracts, Journal of Microbiological Methods, 25, 5, 10.1016/0167-7012(95)00073-9 Smedsgaard, 2004, Classification of terverticillate Penicillia by electrospray mass spectrometric profiling, Studies in Mycology, 49, 243 Tamamura, 2001, Analysis of volatile compounds in Awamori using solid state phase extraction, Journal of the Japanese Society for Food Science and Technology - Nippon Shokuhin Kagaku Kogaku Kaishi, 48, 202, 10.3136/nskkk.48.202 Thrane, 2007, The exo-metabolome in filamentous fungi, Topics in Current Genetics, 18, 235, 10.1007/4735_2007_0230 Udagawa, 1979, The production of chaetoglobosins, sterigmatocystin, O-metylsterigmatocystin and chaetocin by Chaetomium spp. and related fungi, Canadian Journal of Microbiology, 25, 170, 10.1139/m79-027 Udwary, 2002, Synthesis of 11-hydroxyl O-methylsterigmatocystin and the role of a cytochrome P-450 in the final step of aflatoxin biosynthesis, Journal of the American Chemical Society, 124, 5294, 10.1021/ja012185v Vega, 2006, An insect parasitoid carrying an ochratoxin producing fungus, Naturwissenschaften, 93, 297, 10.1007/s00114-006-0101-6 de Vries, 2005, Aspergillus vadensis, a new species of the group of black aspergilli, Antonie van Leeuwenhoek, 87, 195, 10.1007/s10482-004-3194-y Watanabe, 2002, Initial characterization of a type I fatty acid synthase and polyketide synthase multienzyme complex NorS in the biosynthesis of aflatoxin B1, Chemistry and Biology, 9, 981, 10.1016/S1074-5521(02)00213-2 Wen, 2005, Function of the cypX and moxY Genes in Aflatoxin Biosynthesis in Aspergillus parasiticus, Applied and Environmental Microbiology, 71, 3192, 10.1128/AEM.71.6.3192-3198.2005 Wösten, 2007, Hyperproduction of enzymes by fungi, 183 Yu, 2000, Cloning and characterization of avfA and omtB genes involved in aflatoxin biosynthesis in three Aspergillus species, Gene, 248, 157, 10.1016/S0378-1119(00)00126-8 Abarca, 2003, Aspergillus carbonarius as the main source of ochratoxin A contamination in dried vine fruits from the Spanish market, Journal of Food Protection, 66, 504, 10.4315/0362-028X-66.3.504 Abarca, 2004, Taxonomy and significance of black aspergilli, Antonie van Leeuwenhoek, 86, 33, 10.1023/B:ANTO.0000024907.85688.05 Blomquist, 1992, Analysis of fatty acids. A new method for characterization of moulds, Journal of Microbiological Methods, 16, 59, 10.1016/0167-7012(92)90025-Y Cabañes, 2002, What is the source of ochratoxin A in wine?, International Journal of Food Microbiology, 79, 213, 10.1016/S0168-1605(02)00087-9 Cary, 2006, The aflatoxin biosynthesis cluster gene, aflX, encodes an oxidoreductase involved in conv. of versicolorin A to demethylsterigmatocystin, Applied and Environmental Microbiology, 72, 1096, 10.1128/AEM.72.2.1096-1101.2006 Filtenborg, 1980, A simple screening method for toxigenic fungi in pure culture, Lebensmittel Wissenschaft und Technologie, 13, 128 Hendriksen, 1988, Production of mannitol by Penicillium strains, Journal of Chemical Technology and Biotechnology, 43, 223, 10.1002/jctb.280430308 Geisen, 2004, Development of a real-time PCR system for detection of P. nordicum and for monitoring ochratoxin A production in foods based on the ochratoxin polyketide synthase gene, Systematic and. Applied Microbiology, 27, 501, 10.1078/0723202041438419 Heenan, 1998, Ochratoxin A production by Aspergillus carbonarius and A. niger isolates and detection using coconut cream agar, Journal of Food Mycology, 1, 67 Samson, 2006, Old and new concepts of species differentiation in Aspergillus, Medical Mycology, 44, S133, 10.1080/13693780600913224 Taniwaki, 2006, An update on ochratoxigenic fungi and ochratoxin A in coffee, Advances in Experimental Medicine and Biology, 571, 189, 10.1007/0-387-28391-9_12 Varga, 2007, Aspergillus brasiliensis sp. nov., a biseriate black Aspergillus species with world-wide distribution, International Journal of Systematic and Evolutionary Microbiology, 57, 1925, 10.1099/ijs.0.65021-0