STI PCR: An efficient method for amplification and de novo synthesis of long DNA sequences

Cheng, 1994, Long PCR, Nature, 369, 684, 10.1038/369684a0 Cheng, 1994, Effective amplification of long targets from cloned inserts and human genomic DNA, Proc. Natl. Acad. Sci. U S A, 91, 5695, 10.1073/pnas.91.12.5695 Chua, 2017, Long fragment polymerase chain reaction, Methods Mol. Biol., 1620, 65, 10.1007/978-1-4939-7060-5_3 Dai, 2007, PCR-suppression effect: kinetic analysis and application to representative or long-molecule biased PCR-based amplification of complex samples, J. Biotechnol., 128, 435, 10.1016/j.jbiotec.2006.10.018 Davidson, 2003, Insertion of the T3 DNA polymerase thioredoxin binding domain enhances the processivity and fidelity of Taq DNA polymerase, Nucleic Acids Res., 31, 4702, 10.1093/nar/gkg667 Diatchenko, 1996, Suppression subtractive hybridization: a method for generating differentially regulated or tissue-specific cDNA probes and libraries, Proc. Natl. Acad. Sci. U S A, 93, 6025, 10.1073/pnas.93.12.6025 Gibson, 2009, Enzymatic assembly of DNA molecules up to several hundred kilobases, Nat. Methods, 6, 343, 10.1038/nmeth.1318 Hogrefe, 2011, Long-range PCR with a DNA polymerase fusion, Methods Mol. Biol., 687, 17, 10.1007/978-1-60761-944-4_2 Hughes, 2017, Synthetic DNA synthesis and assembly: putting the synthetic in synthetic biology, Cold Spring Harb. Perspect. Biol., 9, a023812, 10.1101/cshperspect.a023812 Ignatov, 2014, A strong strand displacement activity of thermostable DNA polymerase markedly improves the results of DNA amplification, Biotechniques, 57, 81, 10.2144/000114198 Jiang, 2013, One-step cloning of intron-containing hairpin RNA constructs for RNA interference via isothermal in vitro recombination system, Planta, 238, 325, 10.1007/s00425-013-1896-y Liu, 2007, High-efficiency thermal asymmetric interlaced PCR for amplification of unknown flanking sequences, Biotechniques, 43, 649, 10.2144/000112601 Liu, 1995, Thermal asymmetric interlaced PCR: automatable amplification and sequencing of insert end fragments from P1 and YAC clones for chromosome walking, Genomics, 25, 674, 10.1016/0888-7543(95)80010-J Long, 2019, Nested loop PCR (NL-PCR) for amplification of large DNA fragments with complex structures in wheat Lukyanov, 1995, Inverted terminal repeats permit the average length of amplified DNA fragments to be regulated during preparation of cDNA libraries by polymerase chain reaction, Anal. Biochem., 229, 198, 10.1006/abio.1995.1402 Lukyanov, 1999, Selective suppression of polymerase chain reaction, Russ. J. Bioorg. Chem., 25, 141 Matz, 1999, Amplification of cDNA ends based on template-switching effect and step-out PCR, Nucleic Acids Res., 27, 1558, 10.1093/nar/27.6.1558 Mazars, 1991, Directing sequencing by thermal asymmetric PCR, Nucleic Acids Res., 19, 4783, 10.1093/nar/19.17.4783 Moore, 2005, PCR: replicating success, Nature, 435, 235, 10.1038/435235a Mullis, 1987, Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction, Methods Enzymol., 155, 335, 10.1016/0076-6879(87)55023-6 Mullis, 1986, Specific enzymatic amplification of DNA in vitro: the polymerase chain reaction, Cold Spring Harb. Sym., 51, 263, 10.1101/SQB.1986.051.01.032 Shagin, 1999, Regulation of average length of complex PCR product, Nucleic Acids Res., 27, e23, 10.1093/nar/27.18.e23 Siebert, 1995, An improved PCR method for walking in uncloned genomic DNA, Nucleic Acids Res., 23, 1087, 10.1093/nar/23.6.1087 Stemmer, 1995, Single-step assembly of a gene and entire plasmid from large numbers of oligodeoxyribonucleotides, Gene, 164, 49, 10.1016/0378-1119(95)00511-4 Tan, 2019, A modified high-efficiency thermal asymmetric interlaced PCR method for amplifying long unknown flanking sequences, J. Genet. Genomics, 46, 363, 10.1016/j.jgg.2019.05.002 Tang, 2014, The rice restorer Rf4 for wild-abortive cytoplasmic male sterility encodes a mitochondrial-localized PPR protein that functions in reduction of WA352 transcripts, Mol. Plant, 7, 1497, 10.1093/mp/ssu047 Villbrandt, 2000, Domain exchange: chimeras of Thermus aquaticus DNA polymerase, Escherichia coli DNA polymerase I and Thermotoga neapolitana DNA polymerase, Protein Eng., 13, 645, 10.1093/protein/13.9.645 Wang, 2004, A novel strategy to engineer DNA polymerases for enhanced processivity and improved performance in vitro, Nucleic Acids Res., 32, 1197, 10.1093/nar/gkh271 Zhou, 2016, Preparation of rice plant genomic DNA for various applications, Curr. Protoc. Plant Biol., 1, 29, 10.1002/cppb.20002 Zhu, 2017, Development of “Purple Endosperm Rice” by engineering anthocyanin biosynthesis in the endosperm with a high-efficiency transgene stacking system, Mol. Plant, 10, 918, 10.1016/j.molp.2017.05.008