Rice Planting Increases Biological Nitrogen Fixation in Acidic Soil and the Influence of Light and Flood Layer Thickness

Aasamaa K, Sõber A (2011) Stomatal sensitivities to changes in leaf water potential, air humidity, CO2 concentration and light intensity, and the effect of abscisic acid on the sensitivities in six temperate deciduous tree species. Environ Exp Bot 71:72–78. https://doi.org/10.1016/j.envexpbot.2010.10.013

Akter M, Deroo H, De Grave E, Van Alboom T, Kader MA, Pierreux S, Begum MA, Boeckx P, Sleutel S (2018) Link between paddy soil mineral nitrogen release and iron and manganese reduction examined in a rice pot growth experiment. Geoderma 326:9–21. https://doi.org/10.1016/j.geoderma.2018.04.002

Bao SD (2000) Soil and agro-chemistry analysis. China Agricultural Press, Beijing (In Chinese)

Bei QC, Liu G, Tang HY, Cadisch G, Rasche F, Xie ZB (2013) Heterotrophic and phototrophic 15N2 fixation and distribution of fixed 15N in a flooded rice-soil system. Soil Biol Biochem 59:25–31. https://doi.org/10.1016/j.soilbio.2013.01.008

Bellenger JP, Xu Y, Zhang X, Morel FMM, Kraepiel AML (2014) Possible contribution of alternative nitrogenases to nitrogen fixation by asymbiotic N2-fixing bacteria in soils. Soil Biol Biochem 69:413–120. https://doi.org/10.1016/j.soilbio.2013.11.015

Canfield DE, Glazer AN, Falkowski PG (2010) The evolution and future of earth’s nitrogen cycle. Science 330:192–196. https://doi.org/10.1126/science.1186120

Carvalho SD, Castillo JA (2018) Influence of light on plant–phyllosphere interaction. Front Plant Sci 9:1482. https://doi.org/10.3389/fpls.2018.01482

Coyne KJ, Parker AE, Lee CK, Sohm JA, Kalmbach A, Gunderson T, León-Zayas R, Capone DG, Carpenter EJ, Cary SC (2020) The distribution and relative ecological roles of autotrophic and heterotrophic diazotrophs in the McMurdo Dry Valleys, Antarctica. FEMS Microbiol Ecol 96:fiaa010. https://doi.org/10.1093/femsec/fiaa010

Das S, Bhattacharyya P, Adhya TK (2011) Impact of elevated CO2, flooding, and temperature interaction on heterotrophic nitrogen fixation in tropical rice soils. Biol Fertil Soils 47:25–30. https://doi.org/10.1007/s00374-010-0496-2

do Figueiredo MVB, do Mergulhão ACES, Sobral JK, de Junior MAL, de ASF A (2013) Biological nitrogen fixation: importance, associated diversity, and estimates. In: Arora NK (ed) Plant microbe symbiosis: fundamentals and advances. Springer, Delhi, pp 267–289. https://doi.org/10.1007/978-81-322-1287-4

Fernandez-Valiente E, Quesada A (2004) A shallow water ecosystem: rice-fields. The relevance of cyanobacteria in the ecosystem. Limnetica 23:95–107. https://doi.org/10.23818/limn.23.08

Friedl J, De Rosa D, Rowlings DW, Grace PR, Müller C, Scheer C (2018) Dissimilatory nitrate reduction to ammonium (DNRA), not denitrification dominates nitrate reduction in subtropical pasture soils upon rewetting. Soil Biol Biochem 125:340–349. https://doi.org/10.1016/j.soilbio.2018.07.024

Hamoud YA, Guo X, Wang Z, Shaghaleh H, Chen S, Hassan A, Bakour A (2019) Effects of irrigation regime and soil clay content and their interaction on the biological yield, nitrogen uptake and nitrogen-use efficiency of rice grown in southern China. Agric Water Manag 213:934–946. https://doi.org/10.1016/j.agwat.2018.12.017

Jadon P, Selladurai R, Yadav SS, Coumar MV, Dotaniya ML, Singh AK, Bhadouriya J, Kundu S (2018) Volatilization and leaching losses of nitrogen from different coated urea fertilizers. J Soil Sci Plant Nutr 18:1036–1047. https://doi.org/10.4067/S0718-95162018005002903

Ladha JK, Reddy PM (2003) Nitrogen fixation in rice systems: state of knowledge and future prospects. Plant Soil 252:151–167. https://doi.org/10.1023/A:1024175307238

Ladha JK, Tirol-Padre A, Reddy CK, Cassman KG, Verma S, Powlson DS, Kessel CV, Richter DB, Chakraborty D, Pathak H (2016) Global nitrogen budgets in cereals: a 50-year assessment for maize, rice, and wheat production systems. Sci Rep 6:19355. https://doi.org/10.1038/srep19355

Ma J, Bei QC, Wang XJ, Lan P, Liu G, Lin XW, Liu Q, Lin ZB, Liu BJ, Zhang YH, Jin HY, Hu TL, Zhu JG, Xie ZB (2019) Impacts of Mo application on biological nitrogen fixation and diazotrophic communities in a flooded rice-soil system. Sci Total Environ 649:685–694. https://doi.org/10.1016/j.scitotenv.2018.08.318

Meyerholt J, Zaehle S, Smith MJ (2016) Variability of projected terrestrial biosphere responses to elevated levels of atmospheric CO2 due to uncertainty in biological nitrogen fixation. Biogeosciences 13:1491–1518. https://doi.org/10.5194/bg-13-1491-2016

Naher UA, Othman R, Shamsuddin ZHJ, Saud HM, Ismail MR, Rahim KA (2011) Effect of root exuded specific sugars on biological nitrogen fixation and growth promotion in rice (Oryza sativa). Aust J Crop Sci 5:1210–1217

Pandey A, Suter H, He JZ, Hu HW, Chen D (2019) Dissimilatory nitrate reduction to ammonium dominates nitrate reduction in long-term low nitrogen fertilized rice paddies. Soil Biol Biochem 131:149–156. https://doi.org/10.1016/j.soilbio.2019.01.007

Peñuelas J, Terradas J (2014) The foliar microbiome. Trends Plant Sci 19:278–280. https://doi.org/10.1016/j.tplants.2013.12.007

Perakis SS, Pett-Ridge JC, Catricala CE (2017) Nutrient feedbacks to soil heterotrophic nitrogen fixation in forests. Biogeochemistry 134:41–55. https://doi.org/10.1007/s10533-017-0341-x

Rousk K, Degboe J, Michelsen A, Bradley R, Bellenger JP (2017) Molybdenum and phosphorus limitation of moss-associated nitrogen fixation in boreal ecosystems. New Phytol 214:97–107. https://doi.org/10.1111/nph.14331

Rubio LM, Ludden PW (2008) Biosynthesis of the iron-molybdenum cofactor of nitrogenase. Annu Rev Microbiol 62:93–111. https://doi.org/10.1146/annurev.micro.62.081307.162737

Singh S (2014) A review on possible elicitor molecules of cyanobacteria: their role in improving plant growth and providing tolerance against biotic or abiotic stress. J Appl Microbiol 117:1221–1244. https://doi.org/10.1111/jam.12612

Soil Survey Staff (2014) Keys to soil taxonomy, 12th edn. USDA-Natural Resources Conservation Service, Washington, DC

Syiem MB, Singh AK, Rai AN (2017) N2-fixing cyanobacterial systems as biofertilizer. In: Singh JS, Seneviratne G, Agro-environmental sustainability. Springer International Publishing, pp 43–61. https://doi.org/10.1007/978-3-319-49724-2_3

Ussiri D, Lal R (2013) Global nitrogen cycle. In: Ussiri D, Lal R (eds) Soil emission of nitrous oxide and its mitigation. Netherlands. Springer, Heidelberg, pp 29–62. https://doi.org/10.1007/978-94-007-5364-8_2

Venkatachalam S, Ranjan K, Prasanna R, Ramakrishnan B, Thapa S, Kanchan A (2016) Diversity and functional traits of culturable microbiome members, including cyanobacteria in the rice phyllosphere. Plant Biol 18:627–637. https://doi.org/10.1111/plb.12441

Wang XJ, Liu BJ, Ma J, Zhang YH, Hu TL, Zhang H, Feng YC, Pan HL, Xu ZW, Liu G, Lin XW, Zhu JG, Bei QC, Xie ZB (2019) Soil aluminum oxides determine biological nitrogen fixation and diazotrophic communities across major types of paddy soils in China. Soil Biol Biochem 131:81–89. https://doi.org/10.1016/j.soilbio.2018.12.028

Winbourne JB, Brewer SW, Houlton BZ (2017) Iron controls over di-nitrogen fixation in karst tropical forest. Ecology 98:773–781. https://doi.org/10.1002/ecy.1700

Wurzburger N, Bellenger JP, Kraepiel AML, Hedin LO (2012) Molybdenum and phosphorus interact to constrain asymbiotic nitrogen fixation in tropical forests. PLoS One 7:e33710. https://doi.org/10.1371/journal.pone.0033710

Zheng M, Zhou Z, Luo Y, Zhao P, Mo J (2019) Global pattern and controls of biological nitrogen fixation under nutrient enrichment: a meta-analysis. Glob Chang Biol 25:3018–3030. https://doi.org/10.1111/gcb.14705

Zhu YY, Zeng HQ, Di TJ, Xu GH, Shen QR (2011) Investigation on the mechanism of adaption of plasma membrane H+-ATPase to ammonium nutrition in rice. Chin J Rice Sci 25:112–118 (In Chinese). https://doi.org/10.3724/SP.J.1011.2011.00110