Responses of Ammonia-Oxidizing Bacteria and Archaea in Two Agricultural Soils to Nitrification Inhibitors DCD and DMPP: A Pot Experiment

Pedosphere - Tập 23 Số 6 - Trang 729-739 - 2013
Ping Gong1,2, Lili Zhang1, Wu Zhi1, Zhenhua Chen1, Lijun Chen1,3
1Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110016, China
2University of Chinese Academy of Sciences, Beijing, 100049, China
3State Key Laboratory of Forest and Soil Ecology, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110164, China

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Avrahami, 2002, Effect of soil ammonium concentration on N2O release and on the community structure of ammonia oxidizers and denitrifiers, Appl. Environ. Microb., 68, 5685, 10.1128/AEM.68.11.5685-5692.2002

Avrahami, 2003, Effects of temperature and fertilizer on activity and community structure of soil ammonia oxidizers, Environ. Microbiol., 5, 691, 10.1046/j.1462-2920.2003.00457.x

Barraclough, 1995, The use of 15N pool dilution and enrichment to separate the heterotrophic and autotrophic pathways of nitrification, Soil Biol. Biochem., 27, 17, 10.1016/0038-0717(94)00141-M

Barth, 2001, Influence of soil parameters on the effect of 3,4-dimethylpyrazole-phosphate as a nitrification inhibitor, Biol. Fert. Soils., 34, 98, 10.1007/s003740100382

Bremner, 1965, Total nitrogen, 1149

Bremner, 1965, Inorganic forms of nitrogen, 1179

Chaves, 2006, Influence of DCD and DMPP on soil N dynamics after incorporation of vegetable crop residues, Biol. Fert. Soils., 43, 62, 10.1007/s00374-005-0061-6

Chen, 2010, Soil type determines the abundance and community structure of ammonia-oxidizing bacteria and archaea in flooded paddy soils, J. Soil. Sediment., 10, 1510, 10.1007/s11368-010-0256-9

Cookson, 2002, Dicyandiamide slows nitrification in dairy cattle urine patches: effects on soil solution composition, soil pH and pasture yield, Soil Biol. Biochem., 34, 1461, 10.1016/S0038-0717(02)00090-1

De Boer, 2001, Nitrification in acid soils: micro-organisms and mechanisms, Soil Biol. Biochem., 33, 853, 10.1016/S0038-0717(00)00247-9

Di, 2011, Inhibition of ammonium oxidation by a liquid formulation of 3,4-Dimethylpyrazole phosphate (DMPP) compared with a dicyandiamide (DCD) solution in six New Zealand grazed grassland soils, J. Soil. Sediment., 11, 1032, 10.1007/s11368-011-0372-1

Di, 2009, Nitrification driven by bacteria and not archaea in nitrogen-rich grassland soils, Nat. Geosci., 2, 621, 10.1038/ngeo613

Di, 2010, Ammonia-oxidizing bacteria and archaea grow under contrasting soil nitrogen conditions, FEMS Microbiol. Ecol., 72, 386, 10.1111/j.1574-6941.2010.00861.x

Gioacchini, 2002, Influence of urease and nitrification inhibitors on N losses from soils fertilized with urea, Biol. Fert. Soils., 36, 129, 10.1007/s00374-002-0521-1

Gubry-Rangin, 2010, Archaea rather than bacteria control nitrification in two agricultural acidic soils, FEMS Microbiol. Ecol., 74, 566, 10.1111/j.1574-6941.2010.00971.x

Hart, 1994, Nitrogen, mineralization, immobilisation and nitrification, 985

He, 2007, Quantitative analyses of the abundance and composition of ammonia-oxidizing bacteria and ammonia-oxidizing archaea of a Chinese upland red soil under long-term fertilization practices, Environ. Microbiol., 9, 2364, 10.1111/j.1462-2920.2007.01358.x

Jia, 2009, Bacteria rather than Archaea dominate microbial ammonia oxidation in an agricultural soil, Environ. Microbiol., 11, 1658, 10.1111/j.1462-2920.2009.01891.x

Junier, 2009, Effect of common bean (Phaseolus vulgaris L.) on the community composition of ammonia-oxidizing bacteria in soil previously cultivated with, Medicago sativa. Eur. J. Soil Biol., 45, 252, 10.1016/j.ejsobi.2009.01.003

Kettler, 2001, Simplified method for soil particle-size determination to accompany soil-quality analyses, Soil Sci. Soc. Am. J., 65, 849, 10.2136/sssaj2001.653849x

Kleineidam, 2011, Influence of the nitrification inhibitor 3,4-dimethylpyrazole phosphate (DMPP) on ammonia-oxidizing bacteria and archaea in rhizosphere and bulk soil, Chemosphere., 84, 182, 10.1016/j.chemosphere.2011.02.086

Leininger, 2006, Archaea predominate among ammonia-oxidizing prokaryotes in soils, Nature., 442, 806, 10.1038/nature04983

Macadam, 2003, Dicyandiamide and 3,4-dimethyl pyrazole phosphate decrease N2O emissions from grassland but dicyandiamide produces deleterious effects in clover, J. Plant Physiol., 160, 1517, 10.1078/0176-1617-01006

Majumdar, 2005, Crop yield and soil nitrogen dynamics in an intermittently flooded rice field affected by nitrification inhibitors, Arch. Agron. Soil Sci., 51, 645, 10.1080/03650340500201691

Martens-Habbena, 2009, Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria, Nature., 461, 976, 10.1038/nature08465

Mebius, 1960, A rapid method for the determination of organic carbon in soil, Anal. Chim. Acta., 22, 120, 10.1016/S0003-2670(00)88254-9

Mendum, 1999, Use of molecular and isotopic techniques to monitor the response of autotrophic ammonia-oxidizing populations of the beta subdivision of the class Proteobacteria in arable soils to nitrogen fertilizer, Appl. Environ. Microb., 65, 4155, 10.1128/AEM.65.9.4155-4162.1999

Moir, 2007, Effects of the nitrification inhibitor dicyandiamide on soil mineral N, pasture yield, nutrient uptake and pasture quality in a grazed pasture system, Soil Use Manage., 23, 111, 10.1111/j.1475-2743.2006.00078.x

Nicol, 2008, The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria, Environ. Microbiol., 10, 2966, 10.1111/j.1462-2920.2008.01701.x

O'Callaghan, 2010, Effect of the nitrification inhibitor dicyandiamide (DCD) on microbial communities in a pasture soil amended with bovine urine, Soil Biol. Biochem., 42, 1425, 10.1016/j.soilbio.2010.05.003

Offre, 2009, Growth of ammonia-oxidizing archaea in soil microcosms is inhibited by acetylene, FEMS Microbiol. Ecol., 70, 99, 10.1111/j.1574-6941.2009.00725.x

Okano, 2004, Application of real-time PCR to study effects of ammonium on population size of ammonia-oxidizing bacteria in soil, Appl. Environ. Microb., 70, 1008, 10.1128/AEM.70.2.1008-1016.2004

Pasda, 2001, Effect of fertilizers with the new nitrification inhibitor DMPP (3,4-dimethylpyrazole phosphate) on yield and quality of agricultural and horticultural crops, Biol. Fert. Soils., 34, 85, 10.1007/s003740100381

Patra, 2006, Effect of green manure Sesbania sesban and nitrification inhibitor encapsulated calcium carbide (ECC) on soil mineral-N, enzyme activity and nitrifying organisms in a rice-wheat cropping system, Eur. J. Soil Biol., 42, 173, 10.1016/j.ejsobi.2005.12.007

Pereira, 2010, Effect of cattle slurry pre-treatment by separation and addition of nitrification inhibitors on gaseous emissions and N dynamics: A laboratory study, Chemosphere., 79, 620, 10.1016/j.chemosphere.2010.02.029

Phillips, 2000, Effects of agronomic treatments on structure and function of ammonia-oxidizing communities, Appl. Environ. Microb., 66, 5410, 10.1128/AEM.66.12.5410-5418.2000

Prasad, 1995, Nitrification inhibitors for agriculture, health, and the environment, Adv. Agron., 54, 233, 10.1016/S0065-2113(08)60901-3

Ram, 1996, Effect of nitrification inhibitors on herb and essential oil yield of Japanese mint on sandy soil, Fert. Res., 44, 17, 10.1007/BF00750688

Rodgers, 1985, Mineralization of dicyandiamide, labelled with 15N, in acid soils, Soil Biol. Biochem., 17, 253, 10.1016/0038-0717(85)90124-5

Sahrawat, 1985, Perspectives for research on development of nitrification inhibitors, Commun. Soil Sci. Plan., 16, 517, 10.1080/00103628509367624

Schauss, 2009, Dynamics and functional relevance of ammonia-oxidizing archaea in two agricultural soils, Environ. Microbiol., 11, 446, 10.1111/j.1462-2920.2008.01783.x

Tamura, 2007, MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0, Mol. Biol. Evol., 24, 1596, 10.1093/molbev/msm092

Tourna, 2008, Growth, activity and temperature responses of ammoniaoxidizing archaea and bacteria in soil microcosms, Environ. Microbiol., 10, 1357, 10.1111/j.1462-2920.2007.01563.x

Vallejo, 2005, Comparison of N losses (NO−3, N2O, NO) from surface applied, injected or amended (DCD) pig slurry of an irrigated soil in a Mediterranean climate, Plant Soil., 272, 313, 10.1007/s11104-004-5754-3

Verhamme, 2011, Ammonia concentration determines differential growth of ammonia-oxidising archaea and bacteria in soil microcosms, ISME J., 5, 1067, 10.1038/ismej.2010.191

Wang, 2009, Community composition of ammonia-oxidizing bacteria and archaea in rice field soil as affected by nitrogen fertilization, Syst. Appl. Microbiol., 32, 27, 10.1016/j.syapm.2008.09.007

Weiske, 2001, Effect of the new nitrification inhibitor DMPP in comparison to DCD on nitrous oxide (N2O) emissions and methane (CH4) oxidation during 3 years of repeated applications in field experiments, Nutr. Cycl. Agroecosys., 60, 57, 10.1023/A:1012669500547

Xia, 2011, Autotrophic growth of nitrifying community in an agricultural soil, ISME J., 5, 1226, 10.1038/ismej.2011.5

Xu, 2001, Effect of dicyandiamide and hydroquinone on the transformation of urea-nitrogen-15 in soil cropped to wheat, Biol. Fert. Soils., 34, 286, 10.1007/s003740100393

Xu, 2000, Fate of urea-15N in a soil-wheat system as influenced by urease inhibitor hydroquinone and nitrification inhibitor dicyandiamide, Plant Soil., 220, 261, 10.1023/A:1004715827085

Yu, 2007, Evaluation of nitrification inhibitor 3,4-dimethyl pyrazole phosphate on nitrogen leaching in undisturbed soil columns, Chemosphere., 67, 872, 10.1016/j.chemosphere.2006.11.016

Zaman, 2009, Effect of urease and nitrification inhibitors on N transformation, gaseous emissions of ammonia and nitrous oxide, pasture yield and N uptake in grazed pasture system, Soil Biol. Biochem., 41, 1270, 10.1016/j.soilbio.2009.03.011

Zerulla, 2001, 3,4-Dimethylpyrazole phosphate (DMPP)—a new nitrification inhibitor for agriculture and horticulture—An introduction, Biol. Fert. Soils., 34, 79, 10.1007/s003740100380

Zhang, 2010, Autotrophic ammonia oxidation by soil thaumarchaea, P. Natl. Acad. Sci. USA., 107, 17240, 10.1073/pnas.1004947107