Regioselectivity of an arachidonate 9S-lipoxygenase from Sphingopyxis macrogoltabida that biosynthesizes 9S,15S- and 11S,17S-dihydroxy fatty acids from C20 and C22 polyunsaturated fatty acids
Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids - Tập 1867 - Trang 159091 - 2022
Tài liệu tham khảo
An, 2021, Molecular insights into lipoxygenases for biocatalytic synthesis of diverse lipid mediators, Prog. Lipid Res., 83, 10.1016/j.plipres.2021.101110
Haeggstrom, 2011, Lipoxygenase and leukotriene pathways: biochemistry, biology, and roles in disease, Chem. Rev., 111, 5866, 10.1021/cr200246d
Gilbert, 2011, The structure of human 5-lipoxygenase, Science, 331, 217, 10.1126/science.1197203
Okazaki, 2002, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs, Nature, 420, 563, 10.1038/nature01266
Horn, 2013, Functional characterization of genetic enzyme variations in human lipoxygenases, Redox Biol., 1, 566, 10.1016/j.redox.2013.11.001
F. Jobard, C. Lefèvre, A. Karaduman, C. Blanchet-Bardon, S. Emre, J. Weissenbach, M. Özgüc, M. Lathrop, J.F. Prud’homme, J. Fischer, Lipoxygenase-3 (ALOXE3) and 12(R)-lipoxygenase (ALOX12B) are mutated in non-bullous congenital ichthyosiform erythroderma (NCIE) linked to chromosome 17p13.1, Hum. Mol. Genet., 11 107-113.
Zhao, 2011, 15-lipoxygenase 1 interacts with phosphatidylethanolamine-binding protein to regulate MAPK signaling in human airway epithelial cells, Proc. Natl. Acad. Sci. U. S. A., 108, 14246, 10.1073/pnas.1018075108
Gilbert, 2018, Expression of an 8R-lipoxygenase from the coral Plexaura homomalla, Methods Enzymol., 605, 33, 10.1016/bs.mie.2018.02.010
An, 1863, Regiospecificity of a novel bacterial lipoxygenase from myxococcus xanthus for polyunsaturated fatty acids, Biochim. Biophys. Acta Mol. Cell Biol. Lipids, 2018, 823
Mortimer, 2006, Identification and characterization of an arachidonate 11R-lipoxygenase, Arch. Biochem. Biophys., 445, 147, 10.1016/j.abb.2005.10.023
Hamberg, 1998, Manganese lipoxygenase. Discovery of a bis-allylic hydroperoxide as product and intermediate in a lipoxygenase reaction, J. Biol. Chem., 273, 13080, 10.1074/jbc.273.21.13080
Spite, 2009, Resolvin D2 is a potent regulator of leukocytes and controls microbial sepsis, Nature, 461, 1287, 10.1038/nature08541
Gobbetti, 2017, Protectin D1n–3 DPA and resolvin D5n–3 DPA are effectors of intestinal protection, Proc. Natl. Acad. Sci. U. S. A., 114, 3963, 10.1073/pnas.1617290114
Ishihara, 2019, Omega-3 fatty acid-derived mediators that control inflammation and tissue homeostasis, Int. Immunol., 31, 559, 10.1093/intimm/dxz001
Basil, 2016, Specialized pro-resolving mediators: endogenous regulators of infection and inflammation, Nat. Rev. Immunol., 16, 51, 10.1038/nri.2015.4
An, 2015, Characterization of an omega-6 linoleate lipoxygenase from burkholderia thailandensis and its application in the production of 13-hydroxyoctadecadienoic acid, Appl. Microbiol. Biotechnol., 99, 5487, 10.1007/s00253-014-6353-8
Ye, 2004, FATCAT: a web server for flexible structure comparison and structure similarity searching, Nucleic Acids Res., 32, W582, 10.1093/nar/gkh430
Bjelkmar, 2010, Implementation of the CHARMM force field in GROMACS: Analysis of protein stability effects from correction maps, virtual interaction sites, and water models, J. Chem. Theory. Comput., 6, 459, 10.1021/ct900549r
Seo, 1864, Molecular characterization of penicillium oxalicum 6R,8R-linoleate diol synthase with new regiospecificity, Biochim. Biophys. Acta Mol. Cell Biol. Lipids, 2019, 577
Shin, 2016, Characterization of a novel 8R,11S-linoleate diol synthase from Penicillium chrysogenum by identification of its enzymatic products, J. Lipid Res., 57, 207, 10.1194/jlr.M061341
Tsai, 2021, In vitro biosynthetic pathway investigations of neuroprotectin D1 (NPD1) and protectin DX (PDX) by human 12-lipoxygenase, 15-lipoxygenase-1, and 15-lipoxygenase-2, Biochemistry, 60, 1741, 10.1021/acs.biochem.0c00931
Jiang, 1997, Novel oxylipins from the temperate red alga Polyneura latissima: evidence for an arachidonate 9(S)-lipoxygenase, Lipids, 32, 231, 10.1007/s11745-997-0029-9
Kim, 2019, Development of a novel short 12-meric papiliocin-derived peptide that is effective against Gram-negative sepsis, Sci. Rep., 9, 3817, 10.1038/s41598-019-40577-8
Jnawali, 2016, Antituberculosis activity of a naturally occurring flavonoid, isorhamnetin, J. Nat. Prod., 79, 961, 10.1021/acs.jnatprod.5b01033
Chothia, 1986, The relation between the divergence of sequence and structure in proteins, EMBO J., 5, 823, 10.1002/j.1460-2075.1986.tb04288.x
Hammel, 2004, Structural flexibility of the N-terminal beta-barrel domain of 15-lipoxygenase-1 probed by small angle X-ray scattering. Functional consequences for activity regulation and membrane binding, J. Mol. Biol., 343, 917, 10.1016/j.jmb.2004.08.076
Polavarapu, 2014, Effect of polyunsaturated fatty acids and their metabolites on bleomycin-induced cytotoxic action on human neuroblastoma cells in vitro, PLoS One, 9, 10.1371/journal.pone.0114766
Rey, 2016, Resolvin D1 and E1 promote resolution of inflammation in microglial cells in vitro, Brain Behav. Immun., 55, 249, 10.1016/j.bbi.2015.12.013
Rathinam, 2012, Regulation of inflammasome signaling, Nat. Immunol., 13, 333, 10.1038/ni.2237
Andreou, 2010, A bisallylic mini-lipoxygenase from Cyanobacterium cyanothece sp. that has an iron as cofactor, J. Biol. Chem., 285, 14178, 10.1074/jbc.M109.094771
Godoy, 2003, Sphingopyxis chilensis sp nov., a chlorophenol-degrading bacterium that accumulates polyhydroxyalkanoate, and transfer of Sphingomonas alaskensis to Sphingopyxis alaskensis comb. nov, Int. J. Syst. Evol., 53, 473, 10.1099/ijs.0.02375-0
Jisaka, 2000, Identification of amino acid determinants of the positional specificity of mouse 8S-lipoxygenase and human 15S-lipoxygenase-2, J. Biol. Chem., 275, 1287, 10.1074/jbc.275.2.1287
Gilbert, 2012, Conversion of human 5-lipoxygenase to a 15-lipoxygenase by a point mutation to mimic phosphorylation at Serine-663, FASEB J., 26, 3222, 10.1096/fj.12-205286
Kuhn, 2000, Structural basis for the positional specificity of lipoxygenases, Prostaglandins Other Lipid Mediat., 62, 255, 10.1016/S0090-6980(00)00084-8
Palmieri-Thiers, 2011, Identification of putative residues involved in the accessibility of the substrate-binding site of lipoxygenase by site-directed mutagenesis studies, Arch. Biochem. Biophys., 509, 82, 10.1016/j.abb.2011.02.008
Xia, 2017, Protectin DX increases survival in a mouse model of sepsis by ameliorating inflammation and modulating macrophage phenotype, Sci. Rep., 7, 99, 10.1038/s41598-017-00103-0